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Gradual polyploid genome evolution revealed by pan-genomic analysis of Brachypodium hybridum and its diploid progenitors.
Gordon, Sean P; Contreras-Moreira, Bruno; Levy, Joshua J; Djamei, Armin; Czedik-Eysenberg, Angelika; Tartaglio, Virginia S; Session, Adam; Martin, Joel; Cartwright, Amy; Katz, Andrew; Singan, Vasanth R; Goltsman, Eugene; Barry, Kerrie; Dinh-Thi, Vinh Ha; Chalhoub, Boulos; Diaz-Perez, Antonio; Sancho, Ruben; Lusinska, Joanna; Wolny, Elzbieta; Nibau, Candida; Doonan, John H; Mur, Luis A J; Plott, Chris; Jenkins, Jerry; Hazen, Samuel P; Lee, Scott J; Shu, Shengqiang; Goodstein, David; Rokhsar, Daniel; Schmutz, Jeremy; Hasterok, Robert; Catalan, Pilar; Vogel, John P.
Affiliation
  • Gordon SP; DOE Joint Genome Institute, Berkeley, CA, 94720, USA.
  • Contreras-Moreira B; Estación Experimental de Aula Dei (EEAD-CSIC), Zaragoza, Spain.
  • Levy JJ; Fundación ARAID, Zaragoza, Spain.
  • Djamei A; Grupo de Bioquímica, Biofísica y Biología Computacional (BIFI, UNIZAR), Unidad Asociada al CSIC, Zaragoza, Spain.
  • Czedik-Eysenberg A; DOE Joint Genome Institute, Berkeley, CA, 94720, USA.
  • Tartaglio VS; University California, Berkeley, Berkeley, CA, 94720, USA.
  • Session A; Gregor Mendel Institute of Molecular Plant Biology GmbH, Vienna, Austria.
  • Martin J; Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben. Stadt Seeland, Seeland, Germany.
  • Cartwright A; Gregor Mendel Institute of Molecular Plant Biology GmbH, Vienna, Austria.
  • Katz A; DOE Joint Genome Institute, Berkeley, CA, 94720, USA.
  • Singan VR; University California, Berkeley, Berkeley, CA, 94720, USA.
  • Goltsman E; DOE Joint Genome Institute, Berkeley, CA, 94720, USA.
  • Barry K; DOE Joint Genome Institute, Berkeley, CA, 94720, USA.
  • Dinh-Thi VH; DOE Joint Genome Institute, Berkeley, CA, 94720, USA.
  • Chalhoub B; DOE Joint Genome Institute, Berkeley, CA, 94720, USA.
  • Diaz-Perez A; DOE Joint Genome Institute, Berkeley, CA, 94720, USA.
  • Sancho R; DOE Joint Genome Institute, Berkeley, CA, 94720, USA.
  • Lusinska J; DOE Joint Genome Institute, Berkeley, CA, 94720, USA.
  • Wolny E; Organization and evolution of complex genomes (OECG) Institut national de la Recherche agronomique (INRA), Université d'Evry Val d'Essonne (UEVE), Evry, France.
  • Nibau C; Organization and evolution of complex genomes (OECG) Institut national de la Recherche agronomique (INRA), Université d'Evry Val d'Essonne (UEVE), Evry, France.
  • Doonan JH; Institute of Crop Science, Zhejiang University, 866 Yu-Hang-Tang Road, 310058, Hangzhou, China.
  • Mur LAJ; Universidad de Zaragoza-Escuela Politécnica Superior de Huesca, 22071, Huesca, Spain.
  • Plott C; Instituto de Genética, Facultad de Agronomía, Universidad Central de Venezuela, 2102, Maracay, Venezuela.
  • Jenkins J; Universidad de Zaragoza-Escuela Politécnica Superior de Huesca, 22071, Huesca, Spain.
  • Hazen SP; Plant Cytogenetics and Molecular Biology Group, Institute of Biology, Biotechnology and Environmental Protection, Faculty of Natural Sciences, University of Silesia in Katowice, 40-032, Katowice, Poland.
  • Lee SJ; Plant Cytogenetics and Molecular Biology Group, Institute of Biology, Biotechnology and Environmental Protection, Faculty of Natural Sciences, University of Silesia in Katowice, 40-032, Katowice, Poland.
  • Shu S; Institute of Biological, Environmental and Rural Sciences (IBERS), Aberystwyth University, Aberystwyth, Wales, UK.
  • Goodstein D; Institute of Biological, Environmental and Rural Sciences (IBERS), Aberystwyth University, Aberystwyth, Wales, UK.
  • Rokhsar D; Institute of Biological, Environmental and Rural Sciences (IBERS), Aberystwyth University, Aberystwyth, Wales, UK.
  • Schmutz J; HudsonAlpha Institute for Biotechnology, Huntsville, AL, 35806, USA.
  • Hasterok R; HudsonAlpha Institute for Biotechnology, Huntsville, AL, 35806, USA.
  • Catalan P; Biology Department, University of Massachusetts Amherst, Amherst, MA, 01003, USA.
  • Vogel JP; Biology Department, University of Massachusetts Amherst, Amherst, MA, 01003, USA.
Nat Commun ; 11(1): 3670, 2020 07 29.
Article in En | MEDLINE | ID: mdl-32728126
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Polyploidy / Genome, Plant / Evolution, Molecular / Diploidy / Brachypodium Language: En Journal: Nat Commun Year: 2020 Document type: Article
Fulltext
Print
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PubMed Links
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Polyploidy / Genome, Plant / Evolution, Molecular / Diploidy / Brachypodium Language: En Journal: Nat Commun Year: 2020 Document type: Article