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Mitochondrial and Plastid Genomes of the Monoraphid Diatom Schizostauron trachyderma.
Górecka, Ewa; Gastineau, Romain; Davidovich, Nikolai A; Davidovich, Olga I; Ashworth, Matt P; Sabir, Jamal S M; Lemieux, Claude; Turmel, Monique; Witkowski, Andrzej.
Affiliation
  • Górecka E; Institute of Marine and Environmental Sciences, University of Szczecin, Mickiewicza 16a, 70-383 Szczecin, Poland.
  • Gastineau R; Institute of Marine and Environmental Sciences, University of Szczecin, Mickiewicza 16a, 70-383 Szczecin, Poland.
  • Davidovich NA; Karadag Scientific Station-Natural Reserve of the Russian Academy of Sciences, p/o Kurortnoe, Feodosiya, 98188 Crimea, Russia.
  • Davidovich OI; Karadag Scientific Station-Natural Reserve of the Russian Academy of Sciences, p/o Kurortnoe, Feodosiya, 98188 Crimea, Russia.
  • Ashworth MP; Department of Molecular Biosciences, NHB, University of Texas at Austin, Austin, TX 78712, USA.
  • Sabir JSM; Genomics and Biotechnology Research Group, Faculty of Science, King Abdulaziz University, Jeddah 21589, Saudi Arabia.
  • Lemieux C; Département de Biochimie, Microbiologie et Bio-Informatique, Institut de Biologie Intégrative et des Systèmes, Université Laval, Québec, QC G1V 0A6, Canada.
  • Turmel M; Département de Biochimie, Microbiologie et Bio-Informatique, Institut de Biologie Intégrative et des Systèmes, Université Laval, Québec, QC G1V 0A6, Canada.
  • Witkowski A; Institute of Marine and Environmental Sciences, University of Szczecin, Mickiewicza 16a, 70-383 Szczecin, Poland.
Int J Mol Sci ; 22(20)2021 Oct 15.
Article in En | MEDLINE | ID: mdl-34681800
ABSTRACT
We provide for the first time the complete plastid and mitochondrial genomes of a monoraphid diatom Schizostauron trachyderma. The mitogenome is 41,957 bp in size and displays two group II introns in the cox1 gene. The 187,029 bp plastid genome features the typical quadripartite architecture of diatom genomes. It contains a group II intron in the petB gene that overlaps the large single-copy and the inverted repeat region. There is also a group IB4 intron encoding a putative LAGLIDADG homing endonuclease in the rnl gene. The multigene phylogenies conducted provide more evidence of the proximity between S. trachyderma and fistula-bearing species of biraphid diatoms.
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Diatoms / Genome, Mitochondrial / Genome, Plastid Language: En Journal: Int J Mol Sci Year: 2021 Document type: Article
Fulltext
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PubMed Links
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Diatoms / Genome, Mitochondrial / Genome, Plastid Language: En Journal: Int J Mol Sci Year: 2021 Document type: Article