Your browser doesn't support javascript.
loading
The chromosome-level genome of Cherax quadricarinatus.
Chen, Honglin; Zhang, Rui; Liu, Feng; Shao, Changwei; Liu, Fangfang; Li, Weidong; Ren, Jindong; Niu, Baolong; Liu, Haipeng; Lou, Bao.
Affiliation
  • Chen H; State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-products, Institute of Hydrobiology, Zhejiang Academy of Agricultural Sciences, Hangzhou, China.
  • Zhang R; BGI-Qingdao, Qingdao, China.
  • Liu F; State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-products, Institute of Hydrobiology, Zhejiang Academy of Agricultural Sciences, Hangzhou, China.
  • Shao C; Key Lab of Sustainable Development of Marine Fisheries, Ministry of Agriculture and Rural Affairs, Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, 266072, Qingdao, Shandong, China.
  • Liu F; State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-products, Institute of Hydrobiology, Zhejiang Academy of Agricultural Sciences, Hangzhou, China.
  • Li W; State Key Laboratory of Marine Environmental Science; State-Province Joint Engineering Laboratory of Marine Bioproducts and Technology; College of Ocean and Earth Sciences, Xiamen University; Xiamen, 361102, Fujian, China.
  • Ren J; State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-products, Institute of Hydrobiology, Zhejiang Academy of Agricultural Sciences, Hangzhou, China.
  • Niu B; State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-products, Institute of Hydrobiology, Zhejiang Academy of Agricultural Sciences, Hangzhou, China.
  • Liu H; State Key Laboratory of Marine Environmental Science; State-Province Joint Engineering Laboratory of Marine Bioproducts and Technology; College of Ocean and Earth Sciences, Xiamen University; Xiamen, 361102, Fujian, China. haipengliu@xmu.edu.cn.
  • Lou B; State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-products, Institute of Hydrobiology, Zhejiang Academy of Agricultural Sciences, Hangzhou, China. loubao6577@163.com.
Sci Data ; 10(1): 215, 2023 04 17.
Article in En | MEDLINE | ID: mdl-37062798
ABSTRACT
Red claw crayfish (Cherax quadricarinatus) is an aquatic crustacean with considerable potential for the commercial culture and an ideal model for studying the mechanism of sex determination. To provide better genomic resources, we assembled a chromosome-level genome with a size of 5.26 Gb and contig N50 of 144.33 kb. Nearly 90% of sequences were anchored to 100 chromosomes, which represents the high-quality crustacean genome with the largest number of chromosomes ever reported. The genome contained 78.69% repeat sequences and 20,460 protein-coding genes, of which 82.40% were functionally annotated. This chromosome-scale genome would be a valuable reference for assemblies of other complex genomes and studies of evolution in crustaceans.
Subject(s)
Fulltext
Print
XML
PubMed Links
Search on Google

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Genome / Astacoidea Limits: Animals Language: En Journal: Sci Data Year: 2023 Document type: Article
Fulltext
Print
XML
PubMed Links
Search on Google

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Genome / Astacoidea Limits: Animals Language: En Journal: Sci Data Year: 2023 Document type: Article