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simpiTB - a pipeline designed to extract meaningful information from whole genome sequencing data of Mycobacterium tuberculosis complex, allows to combine genomic, phylogenetic and clustering analyses in existing SITVIT databases.
Couvin, David; Stattner, Erick; Segretier, Wilfried; Cazenave, Damien; Rastogi, Nalin.
Affiliation
  • Couvin D; WHO Supranational TB Reference Laboratory, Tuberculosis and Mycobacteria Unit, Institut Pasteur de la Guadeloupe, Les Abymes, Guadeloupe, France; Transmission, Reservoir and Diversity of Pathogens Unit, Institut Pasteur de la Guadeloupe, Les Abymes, Guadeloupe, France. Electronic address: dcouvin@pa
  • Stattner E; Laboratoire de Mathématiques Informatique et Applications (LAMIA), Université des Antilles, Pointe-à-Pitre, Guadeloupe, France.
  • Segretier W; Laboratoire de Mathématiques Informatique et Applications (LAMIA), Université des Antilles, Pointe-à-Pitre, Guadeloupe, France.
  • Cazenave D; Transmission, Reservoir and Diversity of Pathogens Unit, Institut Pasteur de la Guadeloupe, Les Abymes, Guadeloupe, France.
  • Rastogi N; WHO Supranational TB Reference Laboratory, Tuberculosis and Mycobacteria Unit, Institut Pasteur de la Guadeloupe, Les Abymes, Guadeloupe, France.
Infect Genet Evol ; 113: 105466, 2023 09.
Article in En | MEDLINE | ID: mdl-37331497
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Full text: 1 Collection: 01-internacional Health context: 3_ND Database: MEDLINE Main subject: Tuberculosis / Mycobacterium tuberculosis Limits: Humans Language: En Journal: Infect Genet Evol Year: 2023 Document type: Article
Fulltext
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PubMed Links
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Full text: 1 Collection: 01-internacional Health context: 3_ND Database: MEDLINE Main subject: Tuberculosis / Mycobacterium tuberculosis Limits: Humans Language: En Journal: Infect Genet Evol Year: 2023 Document type: Article