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Natural language processing in narrative breast radiology reporting in University Malaya Medical Centre.
Tan, Wee Ming; Ng, Wei Lin; Ganggayah, Mogana Darshini; Hoe, Victor Chee Wai; Rahmat, Kartini; Zaini, Hana Salwani; Mohd Taib, Nur Aishah; Dhillon, Sarinder Kaur.
Affiliation
  • Tan WM; Data Science and Bioinformatics Laboratory, Institute of Biological Sciences, Faculty of Science, Universiti Malaya, Kuala Lumpur, Malaysia.
  • Ng WL; Department of Biomedical Imaging, Faculty of Medicine, Universiti Malaya, Kuala Lumpur, Malaysia.
  • Ganggayah MD; Data Science and Bioinformatics Laboratory, Institute of Biological Sciences, Faculty of Science, Universiti Malaya, Kuala Lumpur, Malaysia.
  • Hoe VCW; Department of Social and Preventive Medicine, Universiti Malaya, Kuala Lumpur, Malaysia.
  • Rahmat K; Department of Biomedical Imaging, Faculty of Medicine, Universiti Malaya, Kuala Lumpur, Malaysia.
  • Zaini HS; Department of Information Technology, University of Malaya Medical Centre, Kuala Lumpur, Malaysia.
  • Mohd Taib NA; Department of Surgery, Faculty of Medicine, Universiti Malaya, Kuala Lumpur, Malaysia.
  • Dhillon SK; Data Science and Bioinformatics Laboratory, Institute of Biological Sciences, Faculty of Science, Universiti Malaya, Kuala Lumpur, Malaysia.
Health Informatics J ; 29(3): 14604582231203763, 2023.
Article in En | MEDLINE | ID: mdl-37740904
ABSTRACT
Radiology reporting is narrative, and its content depends on the clinician's ability to interpret the images accurately. A tertiary hospital, such as anonymous institute, focuses on writing reports narratively as part of training for medical personnel. Nevertheless, free-text reports make it inconvenient to extract information for clinical audits and data mining. Therefore, we aim to convert unstructured breast radiology reports into structured formats using natural language processing (NLP) algorithm. This study used 327 de-identified breast radiology reports from the anonymous institute. The radiologist identified the significant data elements to be extracted. Our NLP algorithm achieved 97% and 94.9% accuracy in training and testing data, respectively. Henceforth, the structured information was used to build the predictive model for predicting the value of the BIRADS category. The model based on random forest generated the highest accuracy of 92%. Our study not only fulfilled the demands of clinicians by enhancing communication between medical personnel, but it also demonstrated the usefulness of mineable structured data in yielding significant insights.
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Radiology / Natural Language Processing Type of study: Prognostic_studies Limits: Humans Country/Region as subject: Asia Language: En Journal: Health Informatics J Year: 2023 Document type: Article

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Radiology / Natural Language Processing Type of study: Prognostic_studies Limits: Humans Country/Region as subject: Asia Language: En Journal: Health Informatics J Year: 2023 Document type: Article