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Deep learning segmentation of fibrous cap in intravascular optical coherence tomography images.
Lee, Juhwan; Kim, Justin N; Dallan, Luis A P; Zimin, Vladislav N; Hoori, Ammar; Hassani, Neda S; Makhlouf, Mohamed H E; Guagliumi, Giulio; Bezerra, Hiram G; Wilson, David L.
Affiliation
  • Lee J; Department of Biomedical Engineering, Case Western Reserve University, Cleveland, OH, 44106, USA.
  • Kim JN; Department of Biomedical Engineering, Case Western Reserve University, Cleveland, OH, 44106, USA.
  • Dallan LAP; Harrington Heart and Vascular Institute, University Hospitals Cleveland Medical Center, Cleveland, OH, 44106, USA.
  • Zimin VN; Brookdale University Hospital Medical Center, 1 Brookdale Plaza, Brooklyn, NY, 11212, USA.
  • Hoori A; Department of Biomedical Engineering, Case Western Reserve University, Cleveland, OH, 44106, USA.
  • Hassani NS; Harrington Heart and Vascular Institute, University Hospitals Cleveland Medical Center, Cleveland, OH, 44106, USA.
  • Makhlouf MHE; Harrington Heart and Vascular Institute, University Hospitals Cleveland Medical Center, Cleveland, OH, 44106, USA.
  • Guagliumi G; Cardiovascular Department, Innovation District, Galeazzi San'Ambrogio Hospital, Milan, Italy.
  • Bezerra HG; Interventional Cardiology Center, Heart and Vascular Institute, University of South Florida, Tampa, FL, 33606, USA.
  • Wilson DL; Department of Biomedical Engineering, Case Western Reserve University, Cleveland, OH, 44106, USA. dlw@case.edu.
Sci Rep ; 14(1): 4393, 2024 02 22.
Article in En | MEDLINE | ID: mdl-38388637
ABSTRACT
Thin-cap fibroatheroma (TCFA) is a prominent risk factor for plaque rupture. Intravascular optical coherence tomography (IVOCT) enables identification of fibrous cap (FC), measurement of FC thicknesses, and assessment of plaque vulnerability. We developed a fully-automated deep learning method for FC segmentation. This study included 32,531 images across 227 pullbacks from two registries (TRANSFORM-OCT and UHCMC). Images were semi-automatically labeled using our OCTOPUS with expert editing using established guidelines. We employed preprocessing including guidewire shadow detection, lumen segmentation, pixel-shifting, and Gaussian filtering on raw IVOCT (r,θ) images. Data were augmented in a natural way by changing θ in spiral acquisitions and by changing intensity and noise values. We used a modified SegResNet and comparison networks to segment FCs. We employed transfer learning from our existing much larger, fully-labeled calcification IVOCT dataset to reduce deep-learning training. Postprocessing with a morphological operation enhanced segmentation performance. Overall, our method consistently delivered better FC segmentation results (Dice 0.837 ± 0.012) than other deep-learning methods. Transfer learning reduced training time by 84% and reduced the need for more training samples. Our method showed a high level of generalizability, evidenced by highly-consistent segmentations across five-fold cross-validation (sensitivity 85.0 ± 0.3%, Dice 0.846 ± 0.011) and the held-out test (sensitivity 84.9%, Dice 0.816) sets. In addition, we found excellent agreement of FC thickness with ground truth (2.95 ± 20.73 µm), giving clinically insignificant bias. There was excellent reproducibility in pre- and post-stenting pullbacks (average FC angle 200.9 ± 128.0°/202.0 ± 121.1°). Our fully automated, deep-learning FC segmentation method demonstrated excellent performance, generalizability, and reproducibility on multi-center datasets. It will be useful for multiple research purposes and potentially for planning stent deployments that avoid placing a stent edge over an FC.
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Plaque, Atherosclerotic / Deep Learning Limits: Humans Language: En Journal: Sci Rep Year: 2024 Document type: Article

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Plaque, Atherosclerotic / Deep Learning Limits: Humans Language: En Journal: Sci Rep Year: 2024 Document type: Article