RefProtDom: a protein database with improved domain boundaries and homology relationships.
Bioinformatics
; 26(18): 2361-2, 2010 Sep 15.
Article
em En
| MEDLINE
| ID: mdl-20693322
ABSTRACT
UNLABELLED RefProtDom provides a set of divergent query domains, originally selected from Pfam, and full-length proteins containing their homologous domains, with diverse architectures, for evaluating pair-wise and iterative sequence similarity searches. Pfam homology and domain boundary annotations in the target library were supplemented using local and semi-global searches, PSI-BLAST searches, and SCOP and CATH classifications. AVAILABILITY:
RefProtDom is available from http//faculty.virginia.edu/wrpearson/fasta/PUBS/gonzalez09a.
Texto completo:
1
Coleções:
01-internacional
Base de dados:
MEDLINE
Assunto principal:
Bases de Dados de Proteínas
Idioma:
En
Revista:
Bioinformatics
Ano de publicação:
2010
Tipo de documento:
Article