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Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes.
Nielsen, H Bjørn; Almeida, Mathieu; Juncker, Agnieszka Sierakowska; Rasmussen, Simon; Li, Junhua; Sunagawa, Shinichi; Plichta, Damian R; Gautier, Laurent; Pedersen, Anders G; Le Chatelier, Emmanuelle; Pelletier, Eric; Bonde, Ida; Nielsen, Trine; Manichanh, Chaysavanh; Arumugam, Manimozhiyan; Batto, Jean-Michel; Quintanilha Dos Santos, Marcelo B; Blom, Nikolaj; Borruel, Natalia; Burgdorf, Kristoffer S; Boumezbeur, Fouad; Casellas, Francesc; Doré, Joël; Dworzynski, Piotr; Guarner, Francisco; Hansen, Torben; Hildebrand, Falk; Kaas, Rolf S; Kennedy, Sean; Kristiansen, Karsten; Kultima, Jens Roat; Léonard, Pierre; Levenez, Florence; Lund, Ole; Moumen, Bouziane; Le Paslier, Denis; Pons, Nicolas; Pedersen, Oluf; Prifti, Edi; Qin, Junjie; Raes, Jeroen; Sørensen, Søren; Tap, Julien; Tims, Sebastian; Ussery, David W; Yamada, Takuji; Renault, Pierre; Sicheritz-Ponten, Thomas; Bork, Peer; Wang, Jun.
Afiliação
  • Nielsen HB; 1] Center for Biological Sequence Analysis, Technical University of Denmark, Kongens Lyngby, Denmark. [2] Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Kongens Lyngby, Denmark. [3].
  • Almeida M; 1] INRA, Institut National de la Recherche Agronomique, UMR 14121 MICALIS, Jouy en Josas, France. [2] INRA, Institut National de la Recherche Agronomique, US 1367 Metagenopolis, Jouy en Josas, France. [3] Department of Computer Science, Center for Bioinformatics and Computational Biology, University
  • Juncker AS; 1] Center for Biological Sequence Analysis, Technical University of Denmark, Kongens Lyngby, Denmark. [2] Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Kongens Lyngby, Denmark.
  • Rasmussen S; Center for Biological Sequence Analysis, Technical University of Denmark, Kongens Lyngby, Denmark.
  • Li J; 1] BGI Hong Kong Research Institute, Hong Kong, China. [2] BGI-Shenzhen, Shenzhen, China. [3] School of Bioscience and Biotechnology, South China University of Technology, Guangzhou, China.
  • Sunagawa S; European Molecular Biology Laboratory, Heidelberg, Germany.
  • Plichta DR; Center for Biological Sequence Analysis, Technical University of Denmark, Kongens Lyngby, Denmark.
  • Gautier L; Center for Biological Sequence Analysis, Technical University of Denmark, Kongens Lyngby, Denmark.
  • Pedersen AG; Center for Biological Sequence Analysis, Technical University of Denmark, Kongens Lyngby, Denmark.
  • Le Chatelier E; 1] INRA, Institut National de la Recherche Agronomique, UMR 14121 MICALIS, Jouy en Josas, France. [2] INRA, Institut National de la Recherche Agronomique, US 1367 Metagenopolis, Jouy en Josas, France.
  • Pelletier E; 1] Commissariat à l'Énergie Atomique et aux Énergies Alternatives, Institut de Génomique, Évry, France. [2] Centre National de la Recherche Scientifique, Évry, France. [3] Université d'Évry Val d'Essonne, Évry, France.
  • Bonde I; 1] Center for Biological Sequence Analysis, Technical University of Denmark, Kongens Lyngby, Denmark. [2] Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Kongens Lyngby, Denmark.
  • Nielsen T; The Novo Nordisk Foundation Center for Basic Metabolic Research, University of Copenhagen, Copenhagen, Denmark.
  • Manichanh C; Digestive System Research Unit, University Hospital Vall d'Hebron, Ciberehd, Barcelona, Spain.
  • Arumugam M; 1] BGI-Shenzhen, Shenzhen, China. [2] European Molecular Biology Laboratory, Heidelberg, Germany. [3] The Novo Nordisk Foundation Center for Basic Metabolic Research, University of Copenhagen, Copenhagen, Denmark.
  • Batto JM; 1] INRA, Institut National de la Recherche Agronomique, UMR 14121 MICALIS, Jouy en Josas, France. [2] INRA, Institut National de la Recherche Agronomique, US 1367 Metagenopolis, Jouy en Josas, France.
  • Quintanilha Dos Santos MB; Center for Biological Sequence Analysis, Technical University of Denmark, Kongens Lyngby, Denmark.
  • Blom N; Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Kongens Lyngby, Denmark.
  • Borruel N; Digestive System Research Unit, University Hospital Vall d'Hebron, Ciberehd, Barcelona, Spain.
  • Burgdorf KS; The Novo Nordisk Foundation Center for Basic Metabolic Research, University of Copenhagen, Copenhagen, Denmark.
  • Boumezbeur F; 1] INRA, Institut National de la Recherche Agronomique, UMR 14121 MICALIS, Jouy en Josas, France. [2] INRA, Institut National de la Recherche Agronomique, US 1367 Metagenopolis, Jouy en Josas, France.
  • Casellas F; Digestive System Research Unit, University Hospital Vall d'Hebron, Ciberehd, Barcelona, Spain.
  • Doré J; 1] INRA, Institut National de la Recherche Agronomique, UMR 14121 MICALIS, Jouy en Josas, France. [2] INRA, Institut National de la Recherche Agronomique, US 1367 Metagenopolis, Jouy en Josas, France.
  • Dworzynski P; Center for Biological Sequence Analysis, Technical University of Denmark, Kongens Lyngby, Denmark.
  • Guarner F; Digestive System Research Unit, University Hospital Vall d'Hebron, Ciberehd, Barcelona, Spain.
  • Hansen T; 1] The Novo Nordisk Foundation Center for Basic Metabolic Research, University of Copenhagen, Copenhagen, Denmark. [2] Faculty of Health Sciences, University of Southern Denmark, Odense, Denmark.
  • Hildebrand F; 1] Department of Structural Biology, VIB, Brussels, Belgium. [2] Department of Bioscience Engineering, Vrije Universiteit, Brussels, Belgium.
  • Kaas RS; National Food Institute, Division for Epidemiology and Microbial Genomics, Technical University of Denmark, Kongens Lyngby, Denmark.
  • Kennedy S; 1] INRA, Institut National de la Recherche Agronomique, UMR 14121 MICALIS, Jouy en Josas, France. [2] INRA, Institut National de la Recherche Agronomique, US 1367 Metagenopolis, Jouy en Josas, France.
  • Kristiansen K; 1] BGI-Shenzhen, Shenzhen, China. [2] Department of Biology, University of Copenhagen, Copenhagen, Denmark.
  • Kultima JR; European Molecular Biology Laboratory, Heidelberg, Germany.
  • Léonard P; 1] INRA, Institut National de la Recherche Agronomique, UMR 14121 MICALIS, Jouy en Josas, France. [2] INRA, Institut National de la Recherche Agronomique, US 1367 Metagenopolis, Jouy en Josas, France.
  • Levenez F; 1] INRA, Institut National de la Recherche Agronomique, UMR 14121 MICALIS, Jouy en Josas, France. [2] INRA, Institut National de la Recherche Agronomique, US 1367 Metagenopolis, Jouy en Josas, France.
  • Lund O; Center for Biological Sequence Analysis, Technical University of Denmark, Kongens Lyngby, Denmark.
  • Moumen B; 1] INRA, Institut National de la Recherche Agronomique, UMR 14121 MICALIS, Jouy en Josas, France. [2] INRA, Institut National de la Recherche Agronomique, US 1367 Metagenopolis, Jouy en Josas, France.
  • Le Paslier D; 1] Commissariat à l'Énergie Atomique et aux Énergies Alternatives, Institut de Génomique, Évry, France. [2] Centre National de la Recherche Scientifique, Évry, France. [3] Université d'Évry Val d'Essonne, Évry, France.
  • Pons N; 1] INRA, Institut National de la Recherche Agronomique, UMR 14121 MICALIS, Jouy en Josas, France. [2] INRA, Institut National de la Recherche Agronomique, US 1367 Metagenopolis, Jouy en Josas, France.
  • Pedersen O; 1] The Novo Nordisk Foundation Center for Basic Metabolic Research, University of Copenhagen, Copenhagen, Denmark. [2] Hagedorn Research Institute, Gentofte, Denmark. [3] Institute of Biomedical Science, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark. [4] Facul
  • Prifti E; 1] INRA, Institut National de la Recherche Agronomique, UMR 14121 MICALIS, Jouy en Josas, France. [2] INRA, Institut National de la Recherche Agronomique, US 1367 Metagenopolis, Jouy en Josas, France.
  • Qin J; 1] BGI Hong Kong Research Institute, Hong Kong, China. [2] BGI-Shenzhen, Shenzhen, China.
  • Raes J; 1] Department of Bioscience Engineering, Vrije Universiteit, Brussels, Belgium. [2] Department of Microbiology and Immunology, Rega Institute, KU Leuven, Belgium. [3] VIB Center for the Biology of Disease, Leuven, Belgium.
  • Sørensen S; Section of Microbiology, Department of Biology, University of Copenhagen, Copenhagen, Denmark.
  • Tap J; European Molecular Biology Laboratory, Heidelberg, Germany.
  • Tims S; Laboratory of Microbiology, Wageningen University, Wageningen, The Netherlands.
  • Ussery DW; Center for Biological Sequence Analysis, Technical University of Denmark, Kongens Lyngby, Denmark.
  • Yamada T; 1] European Molecular Biology Laboratory, Heidelberg, Germany. [2] Department of Biological Information, Tokyo Institute of Technology, Yokohama, Japan.
  • Renault P; INRA, Institut National de la Recherche Agronomique, UMR 14121 MICALIS, Jouy en Josas, France.
  • Sicheritz-Ponten T; 1] Center for Biological Sequence Analysis, Technical University of Denmark, Kongens Lyngby, Denmark. [2] Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Kongens Lyngby, Denmark.
  • Bork P; 1] European Molecular Biology Laboratory, Heidelberg, Germany. [2] Max Delbrück Centre for Molecular Medicine, Berlin, Germany.
  • Wang J; 1] BGI-Shenzhen, Shenzhen, China. [2] The Novo Nordisk Foundation Center for Basic Metabolic Research, University of Copenhagen, Copenhagen, Denmark. [3] Department of Biology, University of Copenhagen, Copenhagen, Denmark. [4] Princess Al Jawhara Center of Excellence in the Research of Hereditary D
Nat Biotechnol ; 32(8): 822-8, 2014 Aug.
Article em En | MEDLINE | ID: mdl-24997787
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Metagenômica Tipo de estudo: Diagnostic_studies Idioma: En Revista: Nat Biotechnol Ano de publicação: 2014 Tipo de documento: Article
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Metagenômica Tipo de estudo: Diagnostic_studies Idioma: En Revista: Nat Biotechnol Ano de publicação: 2014 Tipo de documento: Article