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Draft genome sequence of the extremely halophilic archaeon Haladaptatus cibarius type strain D43(T) isolated from fermented seafood.
Lee, Hae-Won; Kim, Dae-Won; Lee, Mi-Hwa; Kim, Byung-Yong; Cho, Yong-Joon; Yim, Kyung June; Song, Hye Seon; Rhee, Jin-Kyu; Seo, Myung-Ji; Choi, Hak-Jong; Choi, Jong-Soon; Lee, Dong-Gi; Yoon, Changmann; Nam, Young-Do; Roh, Seong Woon.
Afiliação
  • Lee HW; Biological Disaster Analysis Group, Korea Basic Science Institute, Daejeon, 305-806 Republic of Korea.
  • Kim DW; World Institute of Kimchi, Gwangju, 503-360 Republic of Korea.
  • Lee MH; Systems Biology Team, Center for Immunity and Pathology, Korea National Institute of Health, Cheongju, 361-951 Republic of Korea.
  • Kim BY; Research Group of Gut Microbiome, Korea Food Research Institute, Sungnam, 463-746 Republic of Korea.
  • Cho YJ; ChunLab Inc., Seoul National University, Seoul, 151-742 Republic of Korea.
  • Yim KJ; ChunLab Inc., Seoul National University, Seoul, 151-742 Republic of Korea.
  • Song HS; Biological Disaster Analysis Group, Korea Basic Science Institute, Daejeon, 305-806 Republic of Korea.
  • Rhee JK; Biological Disaster Analysis Group, Korea Basic Science Institute, Daejeon, 305-806 Republic of Korea.
  • Seo MJ; Department of Food Science and Engineering, Ewha Womans University, Seoul, 120-750 Republic of Korea.
  • Choi HJ; Division of Bioengineering, Incheon National University, Incheon, 406-772 Republic of Korea.
  • Choi JS; World Institute of Kimchi, Gwangju, 503-360 Republic of Korea.
  • Lee DG; Biological Disaster Analysis Group, Korea Basic Science Institute, Daejeon, 305-806 Republic of Korea.
  • Yoon C; Biological Disaster Analysis Group, Korea Basic Science Institute, Daejeon, 305-806 Republic of Korea.
  • Nam YD; Biological Disaster Analysis Group, Korea Basic Science Institute, Daejeon, 305-806 Republic of Korea.
  • Roh SW; Research Group of Gut Microbiome, Korea Food Research Institute, Sungnam, 463-746 Republic of Korea.
Stand Genomic Sci ; 10: 53, 2015.
Article em En | MEDLINE | ID: mdl-26380039
An extremely halophilic archaeon, Haladaptatus cibarius D43(T), was isolated from traditional Korean salt-rich fermented seafood. Strain D43(T) shows the highest 16S rRNA gene sequence similarity (98.7 %) with Haladaptatus litoreus RO1-28(T), is Gram-negative staining, motile, and extremely halophilic. Despite potential industrial applications of extremely halophilic archaea, their genome characteristics remain obscure. Here, we describe the whole genome sequence and annotated features of strain D43(T). The 3,926,724 bp genome includes 4,092 protein-coding and 57 RNA genes (including 6 rRNA and 49 tRNA genes) with an average G + C content of 57.76 %.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Idioma: En Revista: Stand Genomic Sci Ano de publicação: 2015 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Idioma: En Revista: Stand Genomic Sci Ano de publicação: 2015 Tipo de documento: Article