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High-quality draft genome sequence of a new phytase-producing microorganism Pantoea sp. 3.5.1.
Suleimanova, Aliya D; Toymentseva, Anna A; Boulygina, Eugenia A; Kazakov, Sergey V; Mardanova, Ayslu M; Balaban, Nelly P; Sharipova, Margarita R.
Afiliação
  • Suleimanova AD; Laboratory of Biosynthesis and Bioengineering of the Enzymes, Institute of Fundamental Medicine and Biology, Kazan (Volga region) Federal University, Kazan, Russia.
  • Toymentseva AA; Interdisciplinary Center for Proteomics Research, Kazan (Volga region) Federal University, Kazan, Russia.
  • Boulygina EA; Omics Technologies Laboratory, Kazan (Volga region) Federal University, Kazan, Russia.
  • Kazakov SV; Computer Technologies Laboratory, Information Technologies, Mechanics & Optics University, Saint Petersburg, Russia.
  • Mardanova AM; Laboratory of Biosynthesis and Bioengineering of the Enzymes, Institute of Fundamental Medicine and Biology, Kazan (Volga region) Federal University, Kazan, Russia.
  • Balaban NP; Laboratory of Biosynthesis and Bioengineering of the Enzymes, Institute of Fundamental Medicine and Biology, Kazan (Volga region) Federal University, Kazan, Russia.
  • Sharipova MR; Laboratory of Biosynthesis and Bioengineering of the Enzymes, Institute of Fundamental Medicine and Biology, Kazan (Volga region) Federal University, Kazan, Russia.
Stand Genomic Sci ; 10: 95, 2015.
Article em En | MEDLINE | ID: mdl-26566420
ABSTRACT
Strain 3.5.1 was isolated from soils of the Republic of Tatarstan, Russia, on the basis of presence of a high phytate-degrading activity. Strains with such activities attract special interest because of its potential use as feed additives and natural manures. Strain 3.5.1 harbors a 99 % 16S rRNA nucleotide sequence similarity to different Pantoea species (P. vagans, P. ananatis, P. agglomerans, P. anthophila and Pantoea sp.) and exhibits unique biochemical properties that do not allow strain identification up to species. Moreover, the strain 3.5.1 shows a low ANI and MALDI-TOF Mass Spectrometry scores. Thus, it is likely that the strain 3.5.1 represents a new Pantoea species. Here, we present the genome sequence of Pantoea sp. strain 3.5.1. The 4,964,649 bp draft genome consists of 23 contigs with 4,556 protein-coding and 143 RNA genes. Genome sequencing and annotation revealed two phytase genes and putative regulatory genes controlling its activity.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Tipo de estudo: Prognostic_studies Idioma: En Revista: Stand Genomic Sci Ano de publicação: 2015 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Tipo de estudo: Prognostic_studies Idioma: En Revista: Stand Genomic Sci Ano de publicação: 2015 Tipo de documento: Article