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Meyer, Peter A; Socias, Stephanie; Key, Jason; Ransey, Elizabeth; Tjon, Emily C; Buschiazzo, Alejandro; Lei, Ming; Botka, Chris; Withrow, James; Neau, David; Rajashankar, Kanagalaghatta; Anderson, Karen S; Baxter, Richard H; Blacklow, Stephen C; Boggon, Titus J; Bonvin, Alexandre M J J; Borek, Dominika; Brett, Tom J; Caflisch, Amedeo; Chang, Chung-I; Chazin, Walter J; Corbett, Kevin D; Cosgrove, Michael S; Crosson, Sean; Dhe-Paganon, Sirano; Di Cera, Enrico; Drennan, Catherine L; Eck, Michael J; Eichman, Brandt F; Fan, Qing R; Ferré-D'Amaré, Adrian R; Fromme, J Christopher; Garcia, K Christopher; Gaudet, Rachelle; Gong, Peng; Harrison, Stephen C; Heldwein, Ekaterina E; Jia, Zongchao; Keenan, Robert J; Kruse, Andrew C; Kvansakul, Marc; McLellan, Jason S; Modis, Yorgo; Nam, Yunsun; Otwinowski, Zbyszek; Pai, Emil F; Pereira, Pedro José Barbosa; Petosa, Carlo; Raman, C S; Rapoport, Tom A.
Afiliação
  • Meyer PA; Department of Biological Chemistry and Molecular Pharmacology, Boston, Massachusetts 02115, USA.
  • Socias S; Department of Biological Chemistry and Molecular Pharmacology, Boston, Massachusetts 02115, USA.
  • Key J; Department of Biological Chemistry and Molecular Pharmacology, Boston, Massachusetts 02115, USA.
  • Ransey E; Department of Biological Chemistry and Molecular Pharmacology, Boston, Massachusetts 02115, USA.
  • Tjon EC; Department of Biological Chemistry and Molecular Pharmacology, Boston, Massachusetts 02115, USA.
  • Buschiazzo A; Laboratory of Molecular &Structural Microbiology, Institut Pasteur de Montevideo, Montevideo 11400, Uruguay.
  • Lei M; Department of Structural Biology &Chemistry, Institut Pasteur, 75015 Paris, France.
  • Botka C; Institute of Biochemistry and Cell Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 200031, China.
  • Withrow J; Harvard Medical School, Boston, Massachusetts 02115, USA.
  • Neau D; NE-CAT and Department of Chemistry and Chemical Biology, Cornell University, Building 436E, Argonne National Laboratory, 9700S. Cass Avenue, Argonne, Illinois 60439, USA.
  • Rajashankar K; NE-CAT and Department of Chemistry and Chemical Biology, Cornell University, Building 436E, Argonne National Laboratory, 9700S. Cass Avenue, Argonne, Illinois 60439, USA.
  • Anderson KS; NE-CAT and Department of Chemistry and Chemical Biology, Cornell University, Building 436E, Argonne National Laboratory, 9700S. Cass Avenue, Argonne, Illinois 60439, USA.
  • Baxter RH; Departments of Pharmacology and Molecular Biophysics and Biochemistry, Yale University School of Medicine, New Haven, Connecticut 06520, USA.
  • Blacklow SC; Department of Chemistry, Molecular Biophysics and Biochemistry, Yale University, New Haven, Connecticut 06520, USA.
  • Boggon TJ; Department of Biological Chemistry and Molecular Pharmacology, Boston, Massachusetts 02115, USA.
  • Bonvin AM; Departments of Pharmacology and Molecular Biophysics and Biochemistry, Yale University School of Medicine, New Haven, Connecticut 06520, USA.
  • Borek D; Bijvoet Center, Faculty of Science, Utrecht University, 3584 CH Utrecht, The Netherlands.
  • Brett TJ; Departments of Biophysics and Biochemistry, University of Texas Southwestern Medical Center, Dallas, Texas 75390, USA.
  • Caflisch A; Department of Internal Medicine, Washington University School of Medicine, St Louis, Missouri 63110, USA.
  • Chang CI; Department of Biochemistry, University of Zurich, CH-8057 Zurich, Switzerland.
  • Chazin WJ; Institute of Biological Chemistry, Academia Sinica, Taipei 11529, Taiwan.
  • Corbett KD; Departments of Biochemistry and Chemistry, Center for Structural Biology, Vanderbilt University, Nashville, Tennessee 37232, USA.
  • Cosgrove MS; Ludwig Institute for Cancer Research, San Diego Branch, La Jolla, California 92093, USA.
  • Crosson S; Department of Cellular and Molecular Medicine, University of California, San Diego, La Jolla, California 92093, USA.
  • Dhe-Paganon S; Department of Biochemistry and Molecular Biology, SUNY Upstate Medical University, Syracuse, New York 13210, USA.
  • Di Cera E; Department of Biochemistry and Molecular Biology, University of Chicago, Chicago, Illinois 60637, USA.
  • Drennan CL; Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, Massachusetts 02115, USA.
  • Eck MJ; Edward A. Doisy Department of Biochemistry and Molecular Biology, Saint Louis University School of Medicine, St Louis, Missouri 63104, USA.
  • Eichman BF; Departments of Chemistry and Biology and the Howard Hughes Medical Institute, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA.
  • Fan QR; Department of Biological Chemistry and Molecular Pharmacology, Boston, Massachusetts 02115, USA.
  • Ferré-D'Amaré AR; Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, Massachusetts 02115, USA.
  • Fromme JC; Department of Biological Sciences and Center for Structural Biology, Vanderbilt University, Nashville, Tennessee 37235, USA.
  • Garcia KC; Departments of Pharmacology and Pathology and Cell Biology, Columbia University, New York, New York 10032, USA.
  • Gaudet R; Laboratory of RNA Biophysics, National Heart, Lung and Blood Institute, NIH, Bethesda, Maryland 20892, USA.
  • Gong P; Department of Molecular Biology and Genetics, Weill Institute for Cell and Molecular Biology, Cornell University, Ithaca, New York 14853, USA.
  • Harrison SC; Howard Hughes Medical Institute, Stanford University School of Medicine, Stanford, California 94305, USA.
  • Heldwein EE; Department of Molecular and Cellular Physiology, Stanford University School of Medicine, Stanford, California 94305, USA.
  • Jia Z; Department of Structural Biology, Stanford University School of Medicine, Stanford, California 94305, USA.
  • Keenan RJ; Department of Molecular and Cellular Biology, Harvard University, Cambridge, Massachusetts 02138, USA.
  • Kruse AC; Key Laboratory of Special Pathogens and Biosafety, Wuhan Institute of Virology, Chinese Academy of Sciences, Wuhan 430071, China.
  • Kvansakul M; Department of Biological Chemistry and Molecular Pharmacology, Boston, Massachusetts 02115, USA.
  • McLellan JS; Howard Hughes Medical Institute, Harvard Medical School, Boston, Massachusetts 02115, USA.
  • Modis Y; Laboratory of Molecular Medicine, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts 02115, USA.
  • Nam Y; Department of Molecular Biology and Microbiology, Tufts University School of Medicine, Boston, Massachusetts 02111, USA.
  • Otwinowski Z; Department of Biomedical and Molecular Sciences, Queen's University, Kingston, Ontario, Canada K7M 3G5.
  • Pai EF; Department of Biochemistry and Molecular Biology, University of Chicago, Chicago, Illinois 60637, USA.
  • Pereira PJ; Department of Biological Chemistry and Molecular Pharmacology, Boston, Massachusetts 02115, USA.
  • Petosa C; Department of Biochemistry and Genetics, La Trobe University, Melbourne, Victoria 3086, Australia.
  • Raman CS; Department of Biochemistry, Geisel School of Medicine at Dartmouth, Hanover, New Hampshire 03755, USA.
  • Rapoport TA; Department of Medicine, University of Cambridge, MRC Laboratory of Molecular Biology, Francis Crick Avenue, Cambridge CB2 0QH, UK.
Nat Commun ; 7: 10882, 2016 Mar 07.
Article em En | MEDLINE | ID: mdl-26947396
ABSTRACT
Access to experimental X-ray diffraction image data is fundamental for validation and reproduction of macromolecular models and indispensable for development of structural biology processing methods. Here, we established a diffraction data publication and dissemination system, Structural Biology Data Grid (SBDG; data.sbgrid.org), to preserve primary experimental data sets that support scientific publications. Data sets are accessible to researchers through a community driven data grid, which facilitates global data access. Our analysis of a pilot collection of crystallographic data sets demonstrates that the information archived by SBDG is sufficient to reprocess data to statistics that meet or exceed the quality of the original published structures. SBDG has extended its services to the entire community and is used to develop support for other types of biomedical data sets. It is anticipated that access to the experimental data sets will enhance the paradigm shift in the community towards a much more dynamic body of continuously improving data analysis.
Assuntos

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Publicações / Bases de Dados Genéticas / Substâncias Macromoleculares Idioma: En Revista: Nat Commun Ano de publicação: 2016 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Publicações / Bases de Dados Genéticas / Substâncias Macromoleculares Idioma: En Revista: Nat Commun Ano de publicação: 2016 Tipo de documento: Article