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Summary results of the 2014-2015 DARPA Chikungunya challenge.
Del Valle, Sara Y; McMahon, Benjamin H; Asher, Jason; Hatchett, Richard; Lega, Joceline C; Brown, Heidi E; Leany, Mark E; Pantazis, Yannis; Roberts, David J; Moore, Sean; Peterson, A Townsend; Escobar, Luis E; Qiao, Huijie; Hengartner, Nicholas W; Mukundan, Harshini.
Afiliação
  • Del Valle SY; Analytics, Intelligence, and Technology Division, Los Alamos National Laboratory, P.O. Box 1663, Bikini Atoll Road, Los Alamos, New Mexico, 87544, USA. sdelvall@lanl.gov.
  • McMahon BH; Theoretical Division, Los Alamos National Laboratory, P.O. Box 1663, Bikini Atoll Road, Los Alamos, New Mexico, 87544, USA.
  • Asher J; Leidos Supporting Biomedical Advanced Research and Development Authority, 200 Independence Avenue, S.W., Washington, District of Columbia, 20201, USA.
  • Hatchett R; Office of the Assistant Secretary for Preparedness and Response, U.S. Department of Health and Human Services, 200 Independence Avenue, S.W., Washington, District of Columbia, 20201, USA.
  • Lega JC; Department of Mathematics, University of Arizona, 617 N. Santa Rita Ave, Tucson, Arizona, 85721, USA.
  • Brown HE; Epidemiology and Biostatistics Department, University of Arizona, 1295 N. Martin Ave, Tucson, Arizona, 85724, USA.
  • Leany ME; Utah Valley University, 800 W University Pkwy, Orem, Utah, 84058, USA.
  • Pantazis Y; Department of Mathematics and Statistics, University of Massachusetts, 710 N. Pleasant St, Amherst, Massachusetts, 01003, USA.
  • Roberts DJ; Present Address: Institute of Applied and Computational Mathematics, Foundation for Research and Technology - Hellas, Heraklion, Greece.
  • Moore S; NHS Blood and Transplant-Oxford, BRC Haematology Theme and Radcliffe Department of Medicine, John Radcliffe Hospital, Headley Way, Oxford, OX3 9BQ, UK.
  • Peterson AT; Department of Biological Sciences, University of Notre Dame, Notre Dame, 46556, IN, USA.
  • Escobar LE; Biodiversity Institute, University of Kansas, 1345 Jayhawk Blvd, Lawrence, Kansas, 66045, USA.
  • Qiao H; Department of Fish and Wildlife Conservation, Virginia Tech, Blacksburg, 24061, VA, USA.
  • Hengartner NW; Institute of Zoology, Chinese Academy of Sciences, 1 Beichen West Road, Chaoyang District, Beijing, 100101, China.
  • Mukundan H; Analytics, Intelligence, and Technology Division, Los Alamos National Laboratory, P.O. Box 1663, Bikini Atoll Road, Los Alamos, New Mexico, 87544, USA.
BMC Infect Dis ; 18(1): 245, 2018 05 30.
Article em En | MEDLINE | ID: mdl-29843621
BACKGROUND: Emerging pathogens such as Zika, chikungunya, Ebola, and dengue viruses are serious threats to national and global health security. Accurate forecasts of emerging epidemics and their severity are critical to minimizing subsequent mortality, morbidity, and economic loss. The recent introduction of chikungunya and Zika virus to the Americas underscores the need for better methods for disease surveillance and forecasting. METHODS: To explore the suitability of current approaches to forecasting emerging diseases, the Defense Advanced Research Projects Agency (DARPA) launched the 2014-2015 DARPA Chikungunya Challenge to forecast the number of cases and spread of chikungunya disease in the Americas. Challenge participants (n=38 during final evaluation) provided predictions of chikungunya epidemics across the Americas for a six-month period, from September 1, 2014 to February 16, 2015, to be evaluated by comparison with incidence data reported to the Pan American Health Organization (PAHO). This manuscript presents an overview of the challenge and a summary of the approaches used by the winners. RESULTS: Participant submissions were evaluated by a team of non-competing government subject matter experts based on numerical accuracy and methodology. Although this manuscript does not include in-depth analyses of the results, cursory analyses suggest that simpler models appear to outperform more complex approaches that included, for example, demographic information and transportation dynamics, due to the reporting biases, which can be implicitly captured in statistical models. Mosquito-dynamics, population specific information, and dengue-specific information correlated best with prediction accuracy. CONCLUSION: We conclude that with careful consideration and understanding of the relative advantages and disadvantages of particular methods, implementation of an effective prediction system is feasible. However, there is a need to improve the quality of the data in order to more accurately predict the course of epidemics.
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Texto completo: 1 Coleções: 01-internacional Contexto em Saúde: 1_ASSA2030 / 2_ODS3 / 3_ND / 4_TD Base de dados: MEDLINE Assunto principal: Medidas de Segurança / Surtos de Doenças / Controle de Infecções / United States Department of Defense / Febre de Chikungunya Tipo de estudo: Prognostic_studies / Risk_factors_studies Limite: Humans País/Região como assunto: America do norte Idioma: En Revista: BMC Infect Dis Ano de publicação: 2018 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Contexto em Saúde: 1_ASSA2030 / 2_ODS3 / 3_ND / 4_TD Base de dados: MEDLINE Assunto principal: Medidas de Segurança / Surtos de Doenças / Controle de Infecções / United States Department of Defense / Febre de Chikungunya Tipo de estudo: Prognostic_studies / Risk_factors_studies Limite: Humans País/Região como assunto: America do norte Idioma: En Revista: BMC Infect Dis Ano de publicação: 2018 Tipo de documento: Article