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Sputum Proteomics Reveals a Shift in Vitamin D-binding Protein and Antimicrobial Protein Axis in Tuberculosis Patients.
Bishwal, Subasa C; Das, Mrinal K; Badireddy, Vinod K; Dabral, Deepti; Das, Aleena; Mahapatra, Alok R; Sahu, Sukanya; Malakar, Dipankar; Singh, I Ibungo; Mazumdar, Himanghsu; Patgiri, Saurav J; Deka, Trinayan; Kapfo, Wetetsho; Liegise, Kevideme; Kupa, Rukuwe-U; Debnath, Sanjita; Bhowmik, Rajesh; Debnath, Rahul; Behera, Rajendra K; Pillai, Manoj G; Deuri, Pranjal; Nath, Reema; Khalo, K Pewezo; Sing, W Asoka; Pandit, Bhaswati; Das, Anjan; Bhattacharya, Sibabrata; Behera, Digambar; Saikia, Lahari; Khamo, Vinotsole; Nanda, Ranjan K.
Afiliação
  • Bishwal SC; Translational Health Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, India.
  • Das MK; School of Life Sciences, Sambalpur University, JyotiVihar, Sambalpur, India.
  • Badireddy VK; Translational Health Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, India.
  • Dabral D; Translational Health Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, India.
  • Das A; Translational Health Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, India.
  • Mahapatra AR; Translational Health Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, India.
  • Sahu S; School of Life Sciences, Sambalpur University, JyotiVihar, Sambalpur, India.
  • Malakar D; Translational Health Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, India.
  • Singh II; Sciex, 121 UdyogVihar, Gurgaon, Haryana, India.
  • Mazumdar H; Department of Respiratory Medicine, Regional Institute of Medical Sciences, Imphal, India.
  • Patgiri SJ; Department of Microbiology, Assam Medical College and Hospital, Dibrugarh, India.
  • Deka T; Department of Microbiology, Assam Medical College and Hospital, Dibrugarh, India.
  • Kapfo W; Department of Microbiology, Assam Medical College and Hospital, Dibrugarh, India.
  • Liegise K; Healthcare Laboratory and Research Centre, Naga Hospital Authority Kohima, Nagaland, India.
  • Kupa RU; Healthcare Laboratory and Research Centre, Naga Hospital Authority Kohima, Nagaland, India.
  • Debnath S; Healthcare Laboratory and Research Centre, Naga Hospital Authority Kohima, Nagaland, India.
  • Bhowmik R; Department of Respiratory Medicine, Agartala Government Medical College, Agartala, India.
  • Debnath R; Department of Respiratory Medicine, Agartala Government Medical College, Agartala, India.
  • Behera RK; Department of Respiratory Medicine, Agartala Government Medical College, Agartala, India.
  • Pillai MG; School of Life Sciences, Sambalpur University, JyotiVihar, Sambalpur, India.
  • Deuri P; Sciex, 121 UdyogVihar, Gurgaon, Haryana, India.
  • Nath R; Department of Microbiology, Assam Medical College and Hospital, Dibrugarh, India.
  • Khalo KP; Department of Microbiology, Assam Medical College and Hospital, Dibrugarh, India.
  • Sing WA; Department of Microbiology, Naga Hospital Authority Kohima, Nagaland, India.
  • Pandit B; Department of Respiratory Medicine, Regional Institute of Medical Sciences, Imphal, India.
  • Das A; National Institute of Biomedical Genomics, Kalyani, West Bengal, India.
  • Bhattacharya S; Department of Respiratory Medicine, Agartala Government Medical College, Agartala, India.
  • Behera D; Department of Microbiology, Agartala Government Medical College, Agartala, India.
  • Saikia L; Department of Pulmonary Medicine, Postgraduate Institute of Medical Education and Research, Chandigarh, India.
  • Khamo V; Department of Microbiology, Assam Medical College and Hospital, Dibrugarh, India.
  • Nanda RK; Healthcare Laboratory and Research Centre, Naga Hospital Authority Kohima, Nagaland, India.
Sci Rep ; 9(1): 1036, 2019 01 31.
Article em En | MEDLINE | ID: mdl-30705350
Existing understanding of molecular composition of sputum and its role in tuberculosis patients is variously limited to its diagnostic potential. We sought to identify infection induced sputum proteome alteration in active/non tuberculosis patients (A/NTB) and their role in altered lung patho-physiology. Out of the study population (n = 118), sputum proteins isolated from discovery set samples (n = 20) was used for an 8-plex isobaric tag for relative and absolute concentration analysis. A minimum set of protein with at least log2(ATB/NTB) >±1.0 in ATB was selected as biosignature and validated in 32 samples. Predictive accuracy was calculated from area under the receiver operating characteristic curve (AUC of ROC) using a confirmatory set (n = 50) by Western blot analysis. Mass spectrometry analysis identified a set of 192 sputum proteins, out of which a signature of ß-integrin, vitamin D binding protein:DBP, uteroglobin, profilin and cathelicidin antimicrobial peptide was sufficient to differentiate ATB from NTB. AUC of ROC of the biosignature was calculated to 0.75. A shift in DBP-antimicrobial peptide (AMP) axis in the lungs of tuberculosis patients is observed. The identified sputum protein signature is a promising panel to differentiate ATB from NTB groups and suggest a deregulated DBP-AMP axis in lungs of tuberculosis patients.
Assuntos

Texto completo: 1 Coleções: 01-internacional Contexto em Saúde: 3_ND Base de dados: MEDLINE Assunto principal: Escarro / Tuberculose / Proteína de Ligação a Vitamina D / Proteômica / Antibacterianos Tipo de estudo: Prognostic_studies Limite: Adolescent / Adult / Aged / Aged80 / Female / Humans / Male / Middle aged Idioma: En Revista: Sci Rep Ano de publicação: 2019 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Contexto em Saúde: 3_ND Base de dados: MEDLINE Assunto principal: Escarro / Tuberculose / Proteína de Ligação a Vitamina D / Proteômica / Antibacterianos Tipo de estudo: Prognostic_studies Limite: Adolescent / Adult / Aged / Aged80 / Female / Humans / Male / Middle aged Idioma: En Revista: Sci Rep Ano de publicação: 2019 Tipo de documento: Article