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Impact of quality trimming on the efficiency of reads joining and diversity analysis of Illumina paired-end reads in the context of QIIME1 and QIIME2 microbiome analysis frameworks.
Mohsen, Attayeb; Park, Jonguk; Chen, Yi-An; Kawashima, Hitoshi; Mizuguchi, Kenji.
Afiliação
  • Mohsen A; Artificial Intelligence Center for Health and Biomedical Research (ArCHER), National Institutes of Biomedical Innovation, Health, and Nutrition (NIBIOHN), 7-6-8, Saito-Asagi, Osaka, Ibaraki, 567-0085, Japan. attayeb@nibiohn.go.jp.
  • Park J; Artificial Intelligence Center for Health and Biomedical Research (ArCHER), National Institutes of Biomedical Innovation, Health, and Nutrition (NIBIOHN), 7-6-8, Saito-Asagi, Osaka, Ibaraki, 567-0085, Japan.
  • Chen YA; Artificial Intelligence Center for Health and Biomedical Research (ArCHER), National Institutes of Biomedical Innovation, Health, and Nutrition (NIBIOHN), 7-6-8, Saito-Asagi, Osaka, Ibaraki, 567-0085, Japan.
  • Kawashima H; Artificial Intelligence Center for Health and Biomedical Research (ArCHER), National Institutes of Biomedical Innovation, Health, and Nutrition (NIBIOHN), 7-6-8, Saito-Asagi, Osaka, Ibaraki, 567-0085, Japan.
  • Mizuguchi K; Artificial Intelligence Center for Health and Biomedical Research (ArCHER), National Institutes of Biomedical Innovation, Health, and Nutrition (NIBIOHN), 7-6-8, Saito-Asagi, Osaka, Ibaraki, 567-0085, Japan.
BMC Bioinformatics ; 20(1): 581, 2019 Nov 15.
Article em En | MEDLINE | ID: mdl-31730472

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Variação Genética / Sequenciamento de Nucleotídeos em Larga Escala / Microbiota Idioma: En Revista: BMC Bioinformatics Ano de publicação: 2019 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Variação Genética / Sequenciamento de Nucleotídeos em Larga Escala / Microbiota Idioma: En Revista: BMC Bioinformatics Ano de publicação: 2019 Tipo de documento: Article