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Toward a Common Coordinate Framework for the Human Body.
Rood, Jennifer E; Stuart, Tim; Ghazanfar, Shila; Biancalani, Tommaso; Fisher, Eyal; Butler, Andrew; Hupalowska, Anna; Gaffney, Leslie; Mauck, William; Eraslan, Gökçen; Marioni, John C; Regev, Aviv; Satija, Rahul.
Afiliação
  • Rood JE; Klarman Cell Observatory, Broad Institute, Cambridge, MA 02142, USA.
  • Stuart T; New York Genome Center, New York, NY 10013, USA.
  • Ghazanfar S; Cancer Research UK Cambridge Institute, University of Cambridge, Li Ka Shing Centre, Robinson Way, Cambridge CB2 0RE, UK.
  • Biancalani T; Klarman Cell Observatory, Broad Institute, Cambridge, MA 02142, USA.
  • Fisher E; Cancer Research UK Cambridge Institute, University of Cambridge, Li Ka Shing Centre, Robinson Way, Cambridge CB2 0RE, UK.
  • Butler A; New York Genome Center, New York, NY 10013, USA; New York University, Center for Genomics and Systems Biology, New York, NY 10012, USA.
  • Hupalowska A; Klarman Cell Observatory, Broad Institute, Cambridge, MA 02142, USA.
  • Gaffney L; Klarman Cell Observatory, Broad Institute, Cambridge, MA 02142, USA.
  • Mauck W; New York Genome Center, New York, NY 10013, USA; New York University, Center for Genomics and Systems Biology, New York, NY 10012, USA.
  • Eraslan G; Klarman Cell Observatory, Broad Institute, Cambridge, MA 02142, USA.
  • Marioni JC; Cancer Research UK Cambridge Institute, University of Cambridge, Li Ka Shing Centre, Robinson Way, Cambridge CB2 0RE, UK; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK; Wellcome Sanger Institute, Wellcome Genome Camp
  • Regev A; Klarman Cell Observatory, Broad Institute, Cambridge, MA 02142, USA; Howard Hughes Medical Institute and Koch Institute for Integrative Cancer Research, Department of Biology, MIT, Cambridge, MA 02142, USA. Electronic address: aregev@broadinstitute.org.
  • Satija R; New York Genome Center, New York, NY 10013, USA; New York University, Center for Genomics and Systems Biology, New York, NY 10012, USA. Electronic address: rsatija@nygenome.org.
Cell ; 179(7): 1455-1467, 2019 12 12.
Article em En | MEDLINE | ID: mdl-31835027
ABSTRACT
Understanding the genetic and molecular drivers of phenotypic heterogeneity across individuals is central to biology. As new technologies enable fine-grained and spatially resolved molecular profiling, we need new computational approaches to integrate data from the same organ across different individuals into a consistent reference and to construct maps of molecular and cellular organization at histological and anatomical scales. Here, we review previous efforts and discuss challenges involved in establishing such a common coordinate framework, the underlying map of tissues and organs. We focus on strategies to handle anatomical variation across individuals and highlight the need for new technologies and analytical methods spanning multiple hierarchical scales of spatial resolution.
Assuntos

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Exame Físico / Diagnóstico por Imagem / Variação Anatômica Tipo de estudo: Diagnostic_studies Limite: Humans Idioma: En Revista: Cell Ano de publicação: 2019 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Exame Físico / Diagnóstico por Imagem / Variação Anatômica Tipo de estudo: Diagnostic_studies Limite: Humans Idioma: En Revista: Cell Ano de publicação: 2019 Tipo de documento: Article