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The Medical Genome Reference Bank contains whole genome and phenotype data of 2570 healthy elderly.
Pinese, Mark; Lacaze, Paul; Rath, Emma M; Stone, Andrew; Brion, Marie-Jo; Ameur, Adam; Nagpal, Sini; Puttick, Clare; Husson, Shane; Degrave, Dmitry; Cristina, Tina Navin; Kahl, Vivian F S; Statham, Aaron L; Woods, Robyn L; McNeil, John J; Riaz, Moeen; Barr, Margo; Nelson, Mark R; Reid, Christopher M; Murray, Anne M; Shah, Raj C; Wolfe, Rory; Atkins, Joshua R; Fitzsimmons, Chantel; Cairns, Heath M; Green, Melissa J; Carr, Vaughan J; Cowley, Mark J; Pickett, Hilda A; James, Paul A; Powell, Joseph E; Kaplan, Warren; Gibson, Greg; Gyllensten, Ulf; Cairns, Murray J; McNamara, Martin; Dinger, Marcel E; Thomas, David M.
Afiliação
  • Pinese M; Garvan Institute of Medical Research, Sydney, NSW, Australia.
  • Lacaze P; Children's Cancer Institute, University of New South Wales, Sydney, NSW, Australia.
  • Rath EM; School of Women's and Children's Health, Faculty of Medicine, University of New South Wales, Sydney, NSW, Australia.
  • Stone A; Department of Epidemiology and Preventive Medicine, Monash University, Melbourne, VIC, Australia.
  • Brion MJ; Garvan Institute of Medical Research, Sydney, NSW, Australia.
  • Ameur A; Garvan Institute of Medical Research, Sydney, NSW, Australia.
  • Nagpal S; Children's Cancer Institute, University of New South Wales, Sydney, NSW, Australia.
  • Puttick C; School of Women's and Children's Health, Faculty of Medicine, University of New South Wales, Sydney, NSW, Australia.
  • Husson S; St Vincent's Clinical School, Faculty of Medicine, University of New South Wales, Sydney, NSW, Australia.
  • Degrave D; Garvan Institute of Medical Research, Sydney, NSW, Australia.
  • Cristina TN; Department of Epidemiology and Preventive Medicine, Monash University, Melbourne, VIC, Australia.
  • Kahl VFS; Science for Life Laboratory, Department of Immunology, Genetics and Pathology, Uppsala University, Uppsala, Sweden.
  • Statham AL; Center for Integrative Genomics, Georgia Institute of Technology, Atlanta, GA, USA.
  • Woods RL; Garvan Institute of Medical Research, Sydney, NSW, Australia.
  • McNeil JJ; Garvan Institute of Medical Research, Sydney, NSW, Australia.
  • Riaz M; Garvan Institute of Medical Research, Sydney, NSW, Australia.
  • Barr M; Sax Institute, Sydney, NSW, Australia.
  • Nelson MR; Children's Medical Research Institute, Faculty of Medicine and Health, University of Sydney, Westmead, NSW, Australia.
  • Reid CM; Garvan Institute of Medical Research, Sydney, NSW, Australia.
  • Murray AM; Department of Epidemiology and Preventive Medicine, Monash University, Melbourne, VIC, Australia.
  • Shah RC; Department of Epidemiology and Preventive Medicine, Monash University, Melbourne, VIC, Australia.
  • Wolfe R; Department of Epidemiology and Preventive Medicine, Monash University, Melbourne, VIC, Australia.
  • Atkins JR; Centre for Primary Health Care and Equity, University of New South Wales, Sydney, NSW, Australia.
  • Fitzsimmons C; Department of Epidemiology and Preventive Medicine, Monash University, Melbourne, VIC, Australia.
  • Cairns HM; Menzies Institute for Medical Research, University of Tasmania, Hobart, TAS, Australia.
  • Green MJ; Department of Epidemiology and Preventive Medicine, Monash University, Melbourne, VIC, Australia.
  • Carr VJ; School of Public Health, Curtin University, Perth, WA, Australia.
  • Cowley MJ; Berman Center for Outcomes and Clinical Research, Hennepin Healthcare Research Institute, Hennepin Healthcare, Minneapolis, MN, USA.
  • Pickett HA; Division of Geriatrics, Department of Medicine, Hennepin County Medical Center and University of Minnesota, Minneapolis, MN, USA.
  • James PA; Department of Family Medicine and Rush Alzheimer's Disease Center, Rush University Medical Center, Chicago, IL, USA.
  • Powell JE; Department of Epidemiology and Preventive Medicine, Monash University, Melbourne, VIC, Australia.
  • Kaplan W; School of Biomedical Sciences and Pharmacy, The University of Newcastle, Callaghan, NSW, Australia.
  • Gibson G; Centre for Brain and Mental Health Research, Hunter Medical Research Institute, Newcastle, NSW, Australia.
  • Gyllensten U; School of Biomedical Sciences and Pharmacy, The University of Newcastle, Callaghan, NSW, Australia.
  • Cairns MJ; Centre for Brain and Mental Health Research, Hunter Medical Research Institute, Newcastle, NSW, Australia.
  • McNamara M; School of Biomedical Sciences and Pharmacy, The University of Newcastle, Callaghan, NSW, Australia.
  • Dinger ME; Centre for Brain and Mental Health Research, Hunter Medical Research Institute, Newcastle, NSW, Australia.
  • Thomas DM; School of Psychiatry, University of New South Wales, Sydney, NSW, Australia.
Nat Commun ; 11(1): 435, 2020 01 23.
Article em En | MEDLINE | ID: mdl-31974348
ABSTRACT
Population health research is increasingly focused on the genetic determinants of healthy ageing, but there is no public resource of whole genome sequences and phenotype data from healthy elderly individuals. Here we describe the first release of the Medical Genome Reference Bank (MGRB), comprising whole genome sequence and phenotype of 2570 elderly Australians depleted for cancer, cardiovascular disease, and dementia. We analyse the MGRB for single-nucleotide, indel and structural variation in the nuclear and mitochondrial genomes. MGRB individuals have fewer disease-associated common and rare germline variants, relative to both cancer cases and the gnomAD and UK Biobank cohorts, consistent with risk depletion. Age-related somatic changes are correlated with grip strength in men, suggesting blood-derived whole genomes may also provide a biologic measure of age-related functional deterioration. The MGRB provides a broadly applicable reference cohort for clinical genetics and genomic association studies, and for understanding the genetics of healthy ageing.
Assuntos

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Variação Genética / Genoma Humano / Bases de Dados Genéticas Tipo de estudo: Etiology_studies / Incidence_studies / Observational_studies / Risk_factors_studies Limite: Aged / Aged80 / Female / Humans / Male / Middle aged Idioma: En Revista: Nat Commun Ano de publicação: 2020 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Variação Genética / Genoma Humano / Bases de Dados Genéticas Tipo de estudo: Etiology_studies / Incidence_studies / Observational_studies / Risk_factors_studies Limite: Aged / Aged80 / Female / Humans / Male / Middle aged Idioma: En Revista: Nat Commun Ano de publicação: 2020 Tipo de documento: Article