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Potential Energy Function for Fentanyl-Based Opioid Pain Killers.
Lesnik, Samo; Hodoscek, Milan; Bren, Urban; Stein, Christoph; Bondar, Ana-Nicoleta.
Afiliação
  • Lesnik S; Freie Universität Berlin, Department of Physics, Theoretical Molecular Biophysics Group, Arnimallee 14, D-14195 Berlin, Germany.
  • Hodoscek M; University of Maribor, Faculty of Chemistry and Chemical Engineering, Smetanova ulica 17, SI-2000 Maribor, Slovenia.
  • Bren U; National Institute of Chemistry Slovenia, Theory Department, Hajdrihova 19, SI-1000 Ljubljana, Slovenia.
  • Stein C; University of Maribor, Faculty of Chemistry and Chemical Engineering, Smetanova ulica 17, SI-2000 Maribor, Slovenia.
  • Bondar AN; University of Primorska, Faculty of Mathematics, Natural Sciences and Information Technologies, SI-6000 Koper, Slovenia.
J Chem Inf Model ; 60(7): 3566-3576, 2020 07 27.
Article em En | MEDLINE | ID: mdl-32491854
ABSTRACT
Opioids are molecules whose binding to specialized G-Protein Coupled Receptors (GPCRs) triggers a signaling cascade that leads to the downregulation of pain pathways. Binding of an opioid to the membrane-embedded GPCR occurs when the opioid molecule is protonated, which provides a potential strategy to design nontoxic opioids that are protonated and bind to the GPCR only at the low pH of injured or inflamed tissue. Excellent model systems to study protonation-dependent binding of opioids to GPCRs are fentanyl, which is protonated and binds to the GPCR at both physiological and low pH, and the fluorinated fentanyl derivative NFEPP, which is protonated and binds to the GPCR only at low pH. The molecular mechanisms of fentanyl and NFEPP binding to the GPCR are largely unknown. To enable atomistic studies of opioid binding to GPCRs, we have carried out extensive quantum mechanical and classical mechanical computations to derive a potential energy function for fentanyl and NFEPP and present force field parameters for both opioid molecules. We find that fluorination alters the electronic ground state properties of fentanyl. As a consequence, fentanyl and NFEPP have distinct torsional and electrostatic properties likely to impact how they bind to receptors.
Assuntos

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Fentanila / Analgésicos Opioides Limite: Humans Idioma: En Revista: J Chem Inf Model Ano de publicação: 2020 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Fentanila / Analgésicos Opioides Limite: Humans Idioma: En Revista: J Chem Inf Model Ano de publicação: 2020 Tipo de documento: Article