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Dissecting the Cytochrome P450 OleP Substrate Specificity: Evidence for a Preferential Substrate.
Parisi, Giacomo; Freda, Ida; Exertier, Cécile; Cecchetti, Cristina; Gugole, Elena; Cerutti, Gabriele; D'Auria, Lucia; Macone, Alberto; Vallone, Beatrice; Savino, Carmelinda; Montemiglio, Linda Celeste.
Afiliação
  • Parisi G; Istituto Pasteur-Fondazione Cenci Bolognetti and Department of Biochemical Sciences "Alessandro Rossi Fanelli", Sapienza, University of Rome, P. le Aldo Moro, 5, 00185 Rome, Italy.
  • Freda I; Current affiliation: Center for Life Nano Science @ Sapienza, Istituto Italiano di Tecnologia, Viale Regina Elena, 291, 00161 Rome, Italy.
  • Exertier C; Istituto Pasteur-Fondazione Cenci Bolognetti and Department of Biochemical Sciences "Alessandro Rossi Fanelli", Sapienza, University of Rome, P. le Aldo Moro, 5, 00185 Rome, Italy.
  • Cecchetti C; Istituto Pasteur-Fondazione Cenci Bolognetti and Department of Biochemical Sciences "Alessandro Rossi Fanelli", Sapienza, University of Rome, P. le Aldo Moro, 5, 00185 Rome, Italy.
  • Gugole E; Istituto Pasteur-Fondazione Cenci Bolognetti and Department of Biochemical Sciences "Alessandro Rossi Fanelli", Sapienza, University of Rome, P. le Aldo Moro, 5, 00185 Rome, Italy.
  • Cerutti G; Current affiliation: Department of Life Sciences Imperial College London, South Kensington Campus, London SW7 2AZ, UK.
  • D'Auria L; Istituto Pasteur-Fondazione Cenci Bolognetti and Department of Biochemical Sciences "Alessandro Rossi Fanelli", Sapienza, University of Rome, P. le Aldo Moro, 5, 00185 Rome, Italy.
  • Macone A; Istituto Pasteur-Fondazione Cenci Bolognetti and Department of Biochemical Sciences "Alessandro Rossi Fanelli", Sapienza, University of Rome, P. le Aldo Moro, 5, 00185 Rome, Italy.
  • Vallone B; Current affiliation: Zuckerman Mind Brain Behavior Institute, Columbia University, 3227 Broadway, New York, NY 10027, USA.
  • Savino C; Department of Biochemical Sciences "Alessandro Rossi Fanelli", Sapienza, University of Rome, P. le Aldo Moro, 5, 00185 Rome, Italy.
  • Montemiglio LC; Department of Biochemical Sciences "Alessandro Rossi Fanelli", Sapienza, University of Rome, P. le Aldo Moro, 5, 00185 Rome, Italy.
Biomolecules ; 10(10)2020 10 06.
Article em En | MEDLINE | ID: mdl-33036250
ABSTRACT
The cytochrome P450 OleP catalyzes the epoxidation of aliphatic carbons on both the aglycone 8.8a-deoxyoleandolide (DEO) and the monoglycosylated L-olivosyl-8.8a-deoxyoleandolide (L-O-DEO) intermediates of oleandomycin biosynthesis. We investigated the substrate versatility of the enzyme. X-ray and equilibrium binding data show that the aglycone DEO loosely fits the OleP active site, triggering the closure that prepares it for catalysis only on a minor population of enzyme. The open-to-closed state transition allows solvent molecules to accumulate in a cavity that forms upon closure, mediating protein-substrate interactions. In silico docking of the monoglycosylated L-O-DEO in the closed OleP-DEO structure shows that the L-olivosyl moiety can be hosted in the same cavity, replacing solvent molecules and directly contacting structural elements involved in the transition. X-ray structures of aglycone-bound OleP in the presence of L-rhamnose confirm the cavity as a potential site for sugar binding. All considered, we propose L-O-DEO as the optimal substrate of OleP, the L-olivosyl moiety possibly representing the molecular wedge that triggers a more efficient structural response upon substrate binding, favoring and stabilizing the enzyme closure before catalysis. OleP substrate versatility is supported by structural solvent molecules that compensate for the absence of a glycosyl unit when the aglycone is bound.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Sistema Enzimático do Citocromo P-450 / Lactonas Idioma: En Revista: Biomolecules Ano de publicação: 2020 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Sistema Enzimático do Citocromo P-450 / Lactonas Idioma: En Revista: Biomolecules Ano de publicação: 2020 Tipo de documento: Article