MINTyper: an outbreak-detection method for accurate and rapid SNP typing of clonal clusters with noisy long reads.

Hallgren, Malte B; Overballe-Petersen, Søren; Lund, Ole; Hasman, Henrik; Clausen, Philip T L C

Hallgren, Malte B; Overballe-Petersen, Søren; Lund, Ole; Hasman, Henrik; Clausen, Philip T L C.

Afiliação

Hallgren MB; National Food Institute, Technical University of Denmark, Kemitorvet 204, 2800 Kgs. Lyngby, Denmark.
Overballe-Petersen S; Department of Bacteria, Parasites and Fungi, Statens Serum Institut, 2300 Copenhagen, Denmark.
Lund O; National Food Institute, Technical University of Denmark, Kemitorvet 204, 2800 Kgs. Lyngby, Denmark.
Hasman H; Department of Bacteria, Parasites and Fungi, Statens Serum Institut, 2300 Copenhagen, Denmark.
Clausen PTLC; National Food Institute, Technical University of Denmark, Kemitorvet 204, 2800 Kgs. Lyngby, Denmark.

Biol Methods Protoc ; 6(1): bpab008, 2021.

Article em En | MEDLINE | ID: mdl-33981853

Palavras-chave

ONT; SNP; bioinformatics; clustering

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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Tipo de estudo: Diagnostic_studies Idioma: En Revista: Biol Methods Protoc Ano de publicação: 2021 Tipo de documento: Article

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