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Extending the novel |ρ|-based phasing algorithm to the solution of anomalous scattering substructures from SAD data of protein crystals.
Rius, Jordi; Torrelles, Xavier.
Afiliação
  • Rius J; Institut de Ciència de Materials de Barcelona, ICMAB-CSIC, Campus de la UAB, Bellaterra, Catalonia 08193, Spain.
  • Torrelles X; Institut de Ciència de Materials de Barcelona, ICMAB-CSIC, Campus de la UAB, Bellaterra, Catalonia 08193, Spain.
Acta Crystallogr A Found Adv ; 78(Pt 6): 473-481, 2022 Nov 01.
Article em En | MEDLINE | ID: mdl-36318068
ABSTRACT
Owing to the importance of the single-wavelength anomalous diffraction (SAD) technique, the recently developed |ρ|-based phasing algorithm (SM,|ρ|) incorporating the inner-pixel preservation (ipp) procedure [Rius & Torrelles (2021). Acta Cryst A77, 339-347] has been adapted to the determination of anomalous scattering substructures and its applicability tested on a series of 12 representative experimental data sets, mostly retrieved from the Protein Data Bank. To give an idea of the suitability of the data sets, the main indicators measuring their quality are also given. The dominant anomalous scatterers are either SeMet or S atoms, or metals/clusters incorporated by soaking. The resulting SAD-adapted algorithm solves the substructures of the test protein crystals quite efficiently.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Algoritmos / Proteínas Tipo de estudo: Prognostic_studies Idioma: En Revista: Acta Crystallogr A Found Adv Ano de publicação: 2022 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Algoritmos / Proteínas Tipo de estudo: Prognostic_studies Idioma: En Revista: Acta Crystallogr A Found Adv Ano de publicação: 2022 Tipo de documento: Article