The embryo non-invasive pre-implantation diagnosis era: how far are we?

Advancements in assisted reproduction (AR) methodologies have allowed significant improvements in live birth rates of women who otherwise would not be able to conceive. One of the tools that allowed this improvement is the possibility of embryo selection based on genetic status, performed via preimplantation genetic testing (PGT). Even though the widespread use of PGT from TE biopsy helped to decrease the interval from the beginning of the AR intervention to pregnancy, especially in older patients, in AR, there are still many concerns about the application of this invasive methodology in all cycles. Therefore, recently, researchers started to study the use of cell free DNA (cfDNA) released by the blastocyst in its culture medium to perform PGT, in a method called non-invasive PGT (niPGT). The development of a niPGT would bring the diagnostics power of conventional PGT, but with the advantage of being potentially less harmful to the embryo. Its implementation in clinical practice, however, is under heavy discussion since there are many unknowns about the technique, such as the origin of the cfDNA or if this genetic material is a true representative of the actual ploidy status of the embryo. Available data indicates that there is high correspondence between results observed in TE biopsies and the ones observed from cfDNA, but these results are still contradictory and highly debatable. In the present review, the advantages and disadvantages of niPGT are presented and discussed in relation to tradition TE biopsy-based PGT. Furthermore, there are also presented some other possible non-invasive tools that could be applied in the selection of the best embryo, such as quantification of other molecules as quality biomarkers, or the use artificial intelligence (AI) to identify the best embryos based on morphological and/or morphokitetic parameters.(AU)

Mecanismos epigenéticos nos espermatozoides e o impacto sobre a fertilidade masculina / Epigenetic mechanisms on sperm cells and the impact on male fertility

Por ser uma célula altamente especializada, o espermatozoide apresenta diferentes mecanismos epigenéticos, sendo os principais as metilações do DNA, o código de histonas, os ncRNAs (RNAs não codificadores), e a alta condensação da cromatina pela presença das protaminas. Estes mecanismos interagem entre si, contribuindo para a formação do epigenoma espermático, que modela a carga molecular espermática, que, por sua vez, pode impactar sobre as características do desenvolvimento embrionário e da progênie. Dessa forma, atualmente é consenso que o papel do espermatozoide ultrapassa a entrega de DNA de qualidade para o oócito no momento da fecundação. Pesquisas recentes de diversos grupos, incluindo o nosso, mostram que além da contribuição com DNA de qualidade, o espermatozoide entrega moléculas ao oócito no momento da fecundação que influenciam o desenvolvimento do embrião. Recentemente, essas moléculas de origem espermática (Em inglês: sperm-borne) também são associadas com alterações metabólicas e cognitivas da progênie. Embora ainda pouco se entenda como esses mecanismos podem persistir mesmo com o ciclo de reprogramação celular que ocorre logo após a fecundação, é evidente que estes podem impactar as características da progênie. Nesta revisão abordaremos sobre a modulação do epigenoma espermático e seus efeitos no desenvolvimento embrionário.(AU)

Since it is a highly specialized cell, the spermatozoa display different epigenetic mechanisms; the main ones are DNA methylation, histone code, ncRNAs (non-coding RNAs), and high chromatin condensation by the presence of protamines. These mechanisms act in synergy contributing to forming the sperm epigenome, which modulates the spermatic molecular cargo, and, may impact embryo and offspring development features. Thus, it is currently a consensus that the role of spermatozoa goes beyond delivering quality DNA to the oocyte at fertilization. Relevant findings from several research groups, including ours, have shown that sperm delivers several molecules to the oocyte at fertilization, beyond the contribution to DNA, which influences the development of the embryo. Recently, these sperm-borne molecules have also been associated with metabolic and cognitive changes in the offspring. Although the mechanism by which these changes can persist even after embryo reprogramming is not completely understood, evidence shows that sperm cell molecular content impacts embryo and offspring development. This review will mainly focus on the modulation of the sperm epigenome and its effects on embryo development.(AU)

Intrafollicular barriers and cellular interactions during ovarian follicle development

Follicles are composed of different interdependent cell types including oocytes, cumulus, granulosa, and theca cells. Follicular cells and oocytes exchange signaling molecules from the beginning of the development of the primordial follicles until the moment of ovulation. The follicular structure transforms during folliculogenesis; barriers form between the germ and the somatic follicular cells, and between the somatic follicular cells. As such, communication systems need to adapt to maintain the exchange of signaling molecules. Two critical barriers are established at different stages of development: the zona pellucida, separating the oocyte and the cumulus cells limiting the communication through specific connections, and the antrum, separating subpopulations of follicular cells. In both situations, communication is maintained either by the development of specialized connections as transzonal projections or by paracrine signaling and trafficking of extracellular vesicles through the follicular fluid. The bidirectional communication between the oocytes and the follicle cells is vital for driving folliculogenesis and oogenesis. These communication systems are associated with essential functions related to follicular development, oocyte competence, and embryonic quality. Here, we discuss the formation of the zona pellucida and antrum during folliculogenesis, and their importance in follicle and oocyte development. Moreover, this review discusses the current knowledge on the cellular mechanisms such as the movement of molecules via transzonal projections, and the exchange of extracellular vesicles by follicular cells to overcome these barriers to support female gamete development. Finally, we highlight the undiscovered aspects related to intrafollicular communication among the germ and somatic cells, and between the somatic follicular cells and give our perspective on manipulating the above-mentioned cellular communication to improve reproductive technologies.

Intrafollicular barriers and cellular interactions during ovarian follicle development

Follicles are composed of different interdependent cell types including oocytes, cumulus, granulosa, and theca cells. Follicular cells and oocytes exchange signaling molecules from the beginning of the development of the primordial follicles until the moment of ovulation. The follicular structure transforms during folliculogenesis; barriers form between the germ and the somatic follicular cells, and between the somatic follicular cells. As such, communication systems need to adapt to maintain the exchange of signaling molecules. Two critical barriers are established at different stages of development: the zona pellucida, separating the oocyte and the cumulus cells limiting the communication through specific connections, and the antrum, separating subpopulations of follicular cells. In both situations, communication is maintained either by the development of specialized connections as transzonal projections or by paracrine signaling and trafficking of extracellular vesicles through the follicular fluid. The bidirectional communication between the oocytes and the follicle cells is vital for driving folliculogenesis and oogenesis. These communication systems are associated with essential functions related to follicular development, oocyte competence, and embryonic quality. Here, we discuss the formation of the zona pellucida and antrum during folliculogenesis, and their importance in follicle and oocyte development. Moreover, this review discusses the current knowledge on the cellular mechanisms such as the movement of molecules via transzonal projections, and the exchange of extracellular vesicles by follicular cells to overcome these barriers to support female gamete development. Finally, we highlight the undiscovered aspects related to intrafollicular communication among the germ and somatic cells, and between the somatic follicular cells and give our perspective on manipulating the above-mentioned cellular communication to improve reproductive technologies.(AU)

Extracellular vesicles and its advances in female reproduction

Intercellular communication is an essential mechanism for development and maintenance of multicellular organisms. Extracellular vesicles (EVs) were recently described as new players in the intercellular communication. EVs are double-membrane vesicles secreted by cells and are classified according to their biosynthesis, protein markers and morphology. These extracellular vesicles contain bioactive materials such as miRNA, mRNA, protein and lipids. These characteristics permit their involvement in different biological processes. Reproductive physiology is complex and involves constant communication between cells. Different laboratories have described the presence of EVs secreted by ovarian follicular cells, oviductal cells, in vitro produced embryos and by the endometrium, suggesting that EVs are involved in the development of gametes and embryos, in animals and humans. Therefore, is important to understand physiological mechanisms and contributions of EVs in female reproduction in order to develop new tools to improve in vivo reproductive events and assisted reproductive techniques (ARTs). This review will provide the current knowledge related to EVs in female reproductive tissues and their role in ARTs.

Extracellular vesicles and its advances in female reproduction

Intercellular communication is an essential mechanism for development and maintenance of multicellular organisms. Extracellular vesicles (EVs) were recently described as new players in the intercellular communication. EVs are double-membrane vesicles secreted by cells and are classified according to their biosynthesis, protein markers and morphology. These extracellular vesicles contain bioactive materials such as miRNA, mRNA, protein and lipids. These characteristics permit their involvement in different biological processes. Reproductive physiology is complex and involves constant communication between cells. Different laboratories have described the presence of EVs secreted by ovarian follicular cells, oviductal cells, in vitro produced embryos and by the endometrium, suggesting that EVs are involved in the development of gametes and embryos, in animals and humans. Therefore, is important to understand physiological mechanisms and contributions of EVs in female reproduction in order to develop new tools to improve in vivo reproductive events and assisted reproductive techniques (ARTs). This review will provide the current knowledge related to EVs in female reproductive tissues and their role in ARTs.(AU)

Contributions from the ovarian follicular environment to oocyte function

The magnitude of oocyte’s role for embryo development is categorical. This unique cell contains the machineries and cellular components necessary to remodel male and female chromatin, to sustain early development and to, ultimately, generate a complete and complex individual. However, to gain these competences before fertilization, the oocyte undergoes several morphological, cellular and molecular changes during its lifetime enclosed in the ovarian follicle. This review will briefly revisit how the oocyte orchestrate the follicular cells, and how molecules transit to the oocyte from the innermost (cumulus) and outermost (antrum and granulosa cells) layers surrounding the follicle-enclosed oocyte. Finally, we will discuss the interferences of in vitro culture conditions in the communication of the oocyte with its surrounding cells and the potential strategies to modulate these communication systems to increase oocyte competence.

Contributions from the ovarian follicular environment to oocyte function

The magnitude of oocytes role for embryo development is categorical. This unique cell contains the machineries and cellular components necessary to remodel male and female chromatin, to sustain early development and to, ultimately, generate a complete and complex individual. However, to gain these competences before fertilization, the oocyte undergoes several morphological, cellular and molecular changes during its lifetime enclosed in the ovarian follicle. This review will briefly revisit how the oocyte orchestrate the follicular cells, and how molecules transit to the oocyte from the innermost (cumulus) and outermost (antrum and granulosa cells) layers surrounding the follicle-enclosed oocyte. Finally, we will discuss the interferences of in vitro culture conditions in the communication of the oocyte with its surrounding cells and the potential strategies to modulate these communication systems to increase oocyte competence.(AU)

MicroRNAs: uma nova abordagem para a predição da fertilidade em touros / MicroRNAs: a new approach to predict fertility in bulls

Atualmente, a predição da fertilidade masculina é realizada avaliando diversos aspectosmorfofuncionais (MFF) espermáticos. Em geral, estas características MFF possuem alta correlação com afertilidade. No entanto, existem ejaculados que embora possuam características MFF consideradas adequadasapresentam fertilidade insatisfatória. Assim, há demanda pela busca de novos marcadores que consigam predizera fertilidade dessas amostras seminais. Dentre estes, estão os microRNAs (miRNAs), reguladores póstranscricionais,que desempenham funções importantes na espermatogênese, na maturação espermática e nodesenvolvimento embrionário. Estudos com humanos e bovinos têm mostrado que essas moléculas possuemrelação com a fertilidade. Além disso, já foi descrito também que os miRNAs são altamente regulados nosistema reprodutivo masculino, e principalmente, ao longo da cabeça, corpo e cauda do epidídimo. Atualmenteexistem mais de 790 sequências maduras de miRNAs conhecidas em bovinos e o estabelecimento destes comomarcadores se torna cada vez mais real. Entretanto, o grande desafio destes estudos está em mostrar como estesmiRNAs efetivamente regulam a fertilidade e qual o papel deles nas funções espermáticas e no desenvolvimentoembrionário. Dessa forma, o objetivo desta revisão é compilar os dados existentes na literatura sobre os miRNAse a fertilidade masculina.(AU)

Fertility prediction is performed evaluating several sperm morphological and functional aspects(MFF). In general, MFF features present high correlation with fertility. However, there are ejaculates that,although present normal MFF features, have poor fertility results. So, there is necessity to investigate potentialfertility molecular markers which are able to predict fertility rates. Among them are the microRNAs (miRNAs),which are post-transcriptional regulators molecules that are important to spermatogenesis, sperm maturationand also embryo development. Besides, miRNAs are related with men and bull fertility and are highly regulatedon masculine tract. Currently, there are around 790 mature miRNA sequences in bovine, which could be used asbiomarkers. Nevertheless, the big challenge is to show how miRNAs regulate fertility and their functions onsperm and embryo development. Thus, the goal of this review is to compile the data of scientific literature aboutmiRNAs and male fertility.(AU)

MicroRNAs: uma nova abordagem para a predição da fertilidade em touros / MicroRNAs: a new approach to predict fertility in bulls

Atualmente, a predição da fertilidade masculina é realizada avaliando diversos aspectosmorfofuncionais (MFF) espermáticos. Em geral, estas características MFF possuem alta correlação com afertilidade. No entanto, existem ejaculados que embora possuam características MFF consideradas adequadasapresentam fertilidade insatisfatória. Assim, há demanda pela busca de novos marcadores que consigam predizera fertilidade dessas amostras seminais. Dentre estes, estão os microRNAs (miRNAs), reguladores póstranscricionais,que desempenham funções importantes na espermatogênese, na maturação espermática e nodesenvolvimento embrionário. Estudos com humanos e bovinos têm mostrado que essas moléculas possuemrelação com a fertilidade. Além disso, já foi descrito também que os miRNAs são altamente regulados nosistema reprodutivo masculino, e principalmente, ao longo da cabeça, corpo e cauda do epidídimo. Atualmenteexistem mais de 790 sequências maduras de miRNAs conhecidas em bovinos e o estabelecimento destes comomarcadores se torna cada vez mais real. Entretanto, o grande desafio destes estudos está em mostrar como estesmiRNAs efetivamente regulam a fertilidade e qual o papel deles nas funções espermáticas e no desenvolvimentoembrionário. Dessa forma, o objetivo desta revisão é compilar os dados existentes na literatura sobre os miRNAse a fertilidade masculina.

Fertility prediction is performed evaluating several sperm morphological and functional aspects(MFF). In general, MFF features present high correlation with fertility. However, there are ejaculates that,although present normal MFF features, have poor fertility results. So, there is necessity to investigate potentialfertility molecular markers which are able to predict fertility rates. Among them are the microRNAs (miRNAs),which are post-transcriptional regulators molecules that are important to spermatogenesis, sperm maturationand also embryo development. Besides, miRNAs are related with men and bull fertility and are highly regulatedon masculine tract. Currently, there are around 790 mature miRNA sequences in bovine, which could be used asbiomarkers. Nevertheless, the big challenge is to show how miRNAs regulate fertility and their functions onsperm and embryo development. Thus, the goal of this review is to compile the data of scientific literature aboutmiRNAs and male fertility.

Challenges and perspectives to enhance cattle production via in vitro techniques: focus on epigenetics and cell-secreted vesicles / Desafios e perspectivas na produção in vitro de embriões bovinos: enfoque epigenético e em vesículas secretadas por células

This review aim to present some clinical problems found in IVP-derived animals focusing on NT procedures and to discuss the possible role of epigenetics in such process. Also, as cell-secreted vesicles have been reported as possible regulators of important physiological reproductive processes such as folliculogenesis and fertilization, it is also presented herein a new perspective of manipulating the pre-implantation period trough effector molecules contained in such vesicles.(AU)

Nesta revisão, apresentamos alguns problemas clínicos encontrados nos animais derivados de PIV, principalmente derivados de transferência de núcleo, e discutimos o possível papel da epigenética em tais processos. Além disso, uma vez que vesículas secretadas por células têm sido descritas como possíveis reguladores de processos reprodutivos fisiológicos importantes, tais como a foliculogênese e a fertilização, estas são aqui apresentadas como uma possível nova ferramenta para a manipulação do período embrionário pré-implantacional através de moléculas efetoras, contidas em tais vesículas.(AU)

Stem cells derived from bone marrow and preclinical trials in Veterinary Medicine / Células-tronco derivadas da medula óssea e suas aplicações na Medicina Veterinária

The bone marrow is the largest reserve of stem cells into the body, consisting of stromal cells/mesenchymal niches and hematopoietic system. These cells can differentiate as different lineages as osteogenic, chondrogenic and adipogenic. The bone marrow stem cells population has widely used and an attractive target for potential therapeutic treatment for ple-clinical trials, due its high plasticity of differentiation. Thus, with this review we aimed to show an overview of stem cells and mainly bone marrow cells with basic concepts, as well as their potential new venues for treatment in regenerative veterinary medicine.(AU)

A medula óssea é a maior reserva de células-tronco do corpo, cujo consistem em células mesenquimais e hematopoiéticas. Estascélulas têm a capacidade de diferenciar-se em varias linhagens, como osteogênicas, condrogênicas e adipogênicas. A populaçãode células-tronco derivadas da medula óssea tem sido um alvo atraente para tratamentos terapêuticos e ensaios pré-clínicos,devido sua elevada plasticidade e capacidade de diferenciação. Assim, esta revisão objetiva mostrar uma visão geral das célulastroncoe principalmente conceitos básicos sobre as células da medula óssea, bem como os seus potenciais e novos espaços parao tratamento regenerativo na medicina veterinária.(AU)

Stem cells derived from bone marrow and preclinical trials in Veterinary Medicine / Células-tronco derivadas da medula óssea e suas aplicações na Medicina Veterinária

The bone marrow is the largest reserve of stem cells into the body, consisting of stromal cells/mesenchymal niches and hematopoietic system. These cells can differentiate as different lineages as osteogenic, chondrogenic and adipogenic. The bone marrow stem cells population has widely used and an attractive target for potential therapeutic treatment for ple-clinical trials, due its high plasticity of differentiation. Thus, with this review we aimed to show an overview of stem cells and mainly bone marrow cells with basic concepts, as well as their potential new venues for treatment in regenerative veterinary medicine.

A medula óssea é a maior reserva de células-tronco do corpo, cujo consistem em células mesenquimais e hematopoiéticas. Estascélulas têm a capacidade de diferenciar-se em varias linhagens, como osteogênicas, condrogênicas e adipogênicas. A populaçãode células-tronco derivadas da medula óssea tem sido um alvo atraente para tratamentos terapêuticos e ensaios pré-clínicos,devido sua elevada plasticidade e capacidade de diferenciação. Assim, esta revisão objetiva mostrar uma visão geral das célulastroncoe principalmente conceitos básicos sobre as células da medula óssea, bem como os seus potenciais e novos espaços parao tratamento regenerativo na medicina veterinária.

Efeitos da redução ou substituição do soro fetal bovino por outros compostos na maturação in vitro de oócitos bovinos / Effects of reduction or replacement of fetal calf serum by other compounds during in vitro maturation of bovine oocytes

A utilização do soro fetal bovino (SFB), embora bastante disseminada na produção in vitro (PIV) de embriões bovinos, apresenta limitações por ser um meio indefinido e por causar efeitos que prejudicam a qualidade desses embriões. Por esse motivo, nos últimos anos, grande parte das pesquisas relacionadas à PIV está voltada para a substituição do SFB por outros compostos nos meios de cultura. No presente estudo, foram utilizados como compostos protéicos a albumina sérica bovina livre de ácidos graxos (BSA-FAF) e um produto comercial denominado fluido embriônico (FE) de maneira isolada ou em diferentes combinações e concentrações, com objetivo de substituir ou diminuir a concentração do SFB durante a maturação in vitro (MIV). [...] Ademais, o G3 também apresentou diminuição na taxa de maturação nuclear quando comparado ao G4. Quanto à maturação citoplasmática, nos grupos G2, G7, G6 e G3, houve redução (p<0,05) das taxas para 43,9por cento, 43,2 por cento, 43,1 por cento e 36,5 por cento, respectivamente, quando comparadas ao meio controle (G1), que permitiu a obtenção de valores médios de 62,4 por cento. Por outro lado, nos grupos G8, G4 e G5, a taxa de maturação citoplasmática não foi afetada com a redução do SFB, onde 59,3 por cento, 51,3 por cento e 50,8 por cento dos oócitos apresentaram os GC dispostos na periferia, respectivamente. Os resultados obtidos pelo teste de contrastes ortogonais complementam os obtidos na avaliação da maturação nuclear e migração de grânulos corticais, mostrando a necessidade do SFB durante a MIV, mesmo que em baixas concentrações, e a possibilidade de diminuir a sua concentração associando-o a BSA-FAF e/ou FE. Dessa forma, conclui-se que é possível reduzir a concentração de SFB no meio de MIV para até 3,5% sem prejuízo significativo aos índices de maturação nuclear e citoplasmática.(AU)

The use of fetal calf serum (FCS), although widely employed during in vitro production (IVP) of bovine embryos, has limitations. FCS is an undefined media and may have harmful effects on the quality of embryos. For this reason, in recent years, research efforts aimed at improving IVP of bovine embryos, have focused at the replacement of FCS by alternative compounds in culture media. In this study, fatty acid free bovine serum albumin (BSA-FAF) and embryonic fluid (EF) were used separately or in combination, in different concentrations, to replace or reduce the concentration of FCS during in vitro maturation (IVM). [...] Moreover, G3 also showed inferior nuclear maturation rate when compared to G4. Regarding cytoplasmic maturation, the rates were reduced to 43.9 percent, 43.2 percent, 43.1 percent and 36.5 percent in G2, G7, G6 and G3 groups, respectively, compared to the control group (G1; 62.4 percent). On the other hand, in the groups G8, G4 and G5, maturation rates were not affected by reduction of FCS, where 59.3 percent, 51.3 percent and 50.8 percent of the oocytes displayed CG arranged peripherally, respectively. The results obtained by the orthogonal contrast test are in accordance with the ones from the evaluation of the nuclear maturation and cortical granules migration. These data show the need of FCS on the MIV, even in low concentrations, and the possibility of decrease its concentration by associating it with BSA-FAF and/or EF. Therefore, we concluded that it is possible to reduce the concentration of FCS in IVM medium to a concentration of 3.5 percent without affecting nuclear and cytoplasmic maturation rates.(AU)

Reprogramming somatic cells: pluripotency through gene induction and nuclear transfer

Background: The understanding of nuclear reprogramming pathways provides important contributions to applied and basic sciences such as the development of autologous cellular therapies for the treatment of numerous diseases, the improved efficiency of animal-based biotechnology or the generation of functional gametes in vitro. Strategies such as nuclear transfer and induced reprogramming have been used to induce somatic cells into an embryonic-like pluripotent state. Both techniques have been routinely performed worldwide, and live offspring have been successfully derived from them, resulting in a proof of efficacy of both techniques. Detailed studies on cellular and molecular mechanisms that mediate reprogramming, however, still require further investigation to develop practical applications in veterinary and human medicine. Review: Studies on cell reprogramming, differentiation and proliferation have revealed that a core of transcription factors, as for example, OCT4, SOX2 and NANOG, act together promoting cell commitment or pluripotency. Mechanisms of induced reprogramming by pluripotency-related transcription factors forced expression or nuclear transfer seems to be mediated by the same pathways observed in fertilization, eliciting nuclear remodeling and modulating gene expression. However, abnormal chromatin conformation, often leading to disrupted imprinting and atypical gene expression patterns are frequently observed on in vitro reprogramming. Strategies used to facilitate nuclear remodeling, such as chromatin modifying agents, as for example, histone deacetilases inhibitors or DNA methyltransferases; or chemicals responsible for the inhibition of development related pathways, as for example, MEK and GSK3 inhibitors, when used in the in vitro culture of cells or embryos, have proved to favors transcriptional regulation and improve reprogramming. Such alternatives are highly prone to enable the routine use of in vitro reprogramming in animal production and medical sciences, for example, by promoting the generation of functional male and female functional gametes capable of producing viable offspring. Thus, the properties, deficiencies and implications of induced reprogramming and nuclear transfer techniques in somatic cells were discussed in this review, as well as its probable outcomes. Conclusions: The combination of both reprogramming techniques - induced reprogramming and nuclear transfer, may be essential to clarify the mechanisms of gene expression that are responsible for induced pluripotency. As discussed here, the mechanisms responsible for triggering the pluripotency status of a somatic cell are probably closely related to the epigenetic changes and gene expression profiles present in early development following fertilization. We report here that the nuclear transfer of SOX2 expressing donor cells resulted in similar rates of embryo production when compared to control cells. A better understanding of the contribution of each reprogramming factor used in induced reprogramming may result in the establishment of strategies aiming to enhance in vitro reprogramming performance. Such knowledge will contribute to in vitro animal production by increasing the cloning efficiency and regenerative medicine through the derivation and adequate culture of reprogrammed embryonic stem cells.

Proteomics, metabolomics and lipidomics in reproductive biotechnologies: the MS solutions

Background : A broader view of living systems complexity is bringing important contributions to biological sciences, since the genome expression is affected by other classes of molecules, which in their turn interact themselves in cellular metabolic pathways and biochemical networks. This level of information has been made possible by the emergence of the omic strategies, such as proteomics, metabolomics and lipidomics, that are mainly based on mass spectrometry (MS) platforms. MS has presented an incredible development over the last years, evolving to a powerful and universal analytical technique. Its ability to analyze proteins and small molecules such as lipids, sugars and metabolites at the structural level, with sensitivity and speed inconceivable a few years ago, is the major driving force in the omic fields. The development of electrospray and matrix-assisted laser desorption/ionization (MALDI) ionization techniques has decisively contributed to the many applications of this technology nowadays. Herein, we present and discuss omic concepts and strategies, as well as detail basic principles of MS. Applications and future perspectives of these approaches are focused in the reproductive medicine area. Review: The omic technologies propose global characterization of specific classes of target biomolecules of cellular systems as a strategy to achieve comprehensive understanding of biological functions. The genomics, aimed at performing the entire genetic sequencing of organisms, represented the seminal step towards the understanding of the complex logic that orchestrates the function of all organisms or the defects leading to diseases. But to express the phenotype, information needs to flow from DNA via carrier biomolecules through processes that are being addressed by new omic sciences such as the transcriptomics, proteomics, metabolomics, glycomics, lipidomics, and fluxomics. Mass spectrometry (MS) is nowadays the most powerful technique for the structural characterization of biomolecules, and has therefore become the central technique for the omic sciences. Using revolutionary ionization techniques such as electrospray (ESI) and matrix-assisted laser desorption ionization (MALDI), a wide range of biomolecules such as peptides, proteins, lipids and sugars are efficiently transferred in intact ionized forms to the gas phase for MS analysis. The development of ESI-MS and MALDI-MS has been awarded the Nobel Prize for Chemistry in 2002, rocketing the application of MS in the omic sciences. More recently, ambient ionization MS techniques, such as desorption electrospray ionization (DESI) and easy ambient sonic-spray ionization (EASI), have been developed for ionization in the open atmosphere, in a workup free and high throughput fashion directly from sample in their original environments. For the more complex samples, the coupling with separation techniques such as liquid chromatrography (LC) as well as the use of tandem MS (LC-MS/MS) has allowed comprehensive mixture characterization of major biomolecules. Conclusion: This manuscript describes recent advances of MS in the proteomics, metabolomics and lipidomics for biological sciences, and points out the relevant contributions that MS is likely to bring to fundamental and applied research in human and animal embryo biotechnologies.

Separation of x-bearing bovine sperm by centrifugation in continuous percoll and optiprep density gradient: effect in sperm viability and in vitro embryo production / Separação de espermatozoides portadores do cromossomo x bovino por centrifugação em gradiente de densidade contínuo de percoll e optiprep: efeito sobre a viabilidade espermática e na produção in vitro de embriões

The aim of this study was to separate X-bearing bovine sperm by continuous Percoll and OptiPrep density gradients and to validate the sexing of resultant in vitro produced embryos by Polimerase Chain Reaction (PCR). Frozen/thawed sperm was layered on density gradients which were previously prepared in polystyrene tubes, 24 h before procedures and maintained at 4 C. The tubes were centrifuged at 500 x g for 15 min at 22 C. Supernatants were gently aspirated and the sperm recovered from the bottom of the tubes. Viability and integrity of sperm were evaluated by Trypan Blue/Giemsa stain. Cleavage and blastocyst rates were determined by in vitro production of embryos and PCR was performed for identification of the embryos genetic sex. No damage in viability and acrossomal integrity and in cleavage and blastocyst rates was found in the Percoll and OptiPrep treatment compared to the non-centrifuged group (P>0.05). The percentage of female embryos in the Percoll and OptiPrep group was 63.0 and 47.6%, respectively. The female embryos in control group were 48.7%. A sexual deviation in the Percoll density gradient was achieved without reduction of sperm viability and in vitro production rates.KEY WORDS: Bovine, centrifugation, in vitro production of embryos, PCR, X-bearing sperm.

O objetivo deste estudo foi separar espermatozoides bovinos portadores do cromossomo X pela centrifugação em gradiente de densidade contínuo de Percoll e OptiPrep, e validar a sexagem pela reação em cadeia da polimerase (PCR), dos embriões produzidos in vitro. Para a sexagem, espermatozoides descongelados foram depositados nos gradientes de densidade, previamente preparados, em tubos de poliestireno, 24 horas antes da sexagem e mantidos a 4C. Centrifugou-se a 500 x g por quinze minutos a 22C. Os sobrenadantes foram aspirados, e os espermatozoides recuperados do fundo dos tubos. Avaliaram-se a viabilidade e a integridade dos espermatozoides pela coloração Azul de Tripan/Giemsa e determinou-se a taxa de clivagem e de blastocisto pela produção in vitro dos embriões, identificando-se o sexo genético deste embriões pela PCR. Não foram detectados danos à viabilidade e à integridade acrossomal, nem nas taxas de clivagem e de blastocistos no grupo Percoll e OptiPrep em comparação com o grupo não centrifugado (P>0,05). A porcentagem de embriões fêmeas no grupo Percoll e OptiPrep foi de 63% e 47,6%, respectivamente, e no grupo controle foi de 48,7%. Houve um desvio na proporção sexual no gradiente de Percoll, sem redução da viabilidade espermática e das taxas de produção in vitro.PALAVRAS-CHAVES: Bovino, centrifugação, espermatozoides X, produção in vitro de embriões, PCR.

SEPARATION OF X-BEARING BOVINE SPERM BY CENTRIFUGATION IN CONTINUOUS PERCOLL AND OPTIPREP DENSITY GRADIENT: EFFECT IN SPERM VIABILITY AND IN VITRO EMBRYO PRODUCTION / SEPARAÇÃO DE ESPERMATOZOIDES PORTADORES DO CROMOSSOMO X BOVINO POR CENTRIFUGAÇÃO EM GRADIENTE DE DENSIDADE CONTÍNUO DE PERCOLL E OPTIPREP: EFEITO SOBRE A VIABILIDADE ESPERMÁTICA E NA PRODUÇÃO IN VITRO DE EMBRIÕES

The aim of this study was to separate X-bearing bovine sperm by continuous Percoll and OptiPrep density gradients and to validate the sexing of resultant in vitro produced embryos by Polimerase Chain Reaction (PCR). Frozen/thawed sperm was layered on density gradients which were previously prepared in polystyrene tubes, 24 h before procedures and maintained at 4 C. The tubes were centrifuged at 500 x g for 15 min at 22 C. Supernatants were gently aspirated and the sperm recovered from the bottom of the tubes. Viability and integrity of sperm were evaluated by Trypan Blue/Giemsa stain. Cleavage and blastocyst rates were determined by in vitro production of embryos and PCR was performed for identification of the embryos genetic sex. No damage in viability and acrossomal integrity and in cleavage and blastocyst rates was found in the Percoll and OptiPrep treatment compared to the non-centrifuged group (P>0.05). The percentage of female embryos in the Percoll and OptiPrep group was 63.0 and 47.6%, respectively. The female embryos in control group were 48.7%. A sexual deviation in the Percoll density gradient was achieved without reduction of sperm viability and in vitro production rates.KEY WORDS: Bovine, centrifugation, in vitro production of embryos, PCR, X-bearing sperm.

O objetivo deste estudo foi separar espermatozoides bovinos portadores do cromossomo X pela centrifugação em gradiente de densidade contínuo de Percoll e OptiPrep, e validar a sexagem pela reação em cadeia da polimerase (PCR), dos embriões produzidos in vitro. Para a sexagem, espermatozoides descongelados foram depositados nos gradientes de densidade, previamente preparados, em tubos de poliestireno, 24 horas antes da sexagem e mantidos a 4C. Centrifugou-se a 500 x g por quinze minutos a 22C. Os sobrenadantes foram aspirados, e os espermatozoides recuperados do fundo dos tubos. Avaliaram-se a viabilidade e a integridade dos espermatozoides pela coloração Azul de Tripan/Giemsa e determinou-se a taxa de clivagem e de blastocisto pela produção in vitro dos embriões, identificando-se o sexo genético deste embriões pela PCR. Não foram detectados danos à viabilidade e à integridade acrossomal, nem nas taxas de clivagem e de blastocistos no grupo Percoll e OptiPrep em comparação com o grupo não centrifugado (P>0,05). A porcentagem de embriões fêmeas no grupo Percoll e OptiPrep foi de 63% e 47,6%, respectivamente, e no grupo controle foi de 48,7%. Houve um desvio na proporção sexual no gradiente de Percoll, sem redução da viabilidade espermática e das taxas de produção in vitro.PALAVRAS-CHAVES: Bovino, centrifugação, espermatozoides X, produção in vitro de embriões, PCR.

Epigenética do desenvolvimento em bovinos : DNA metiltransferases e genes "imprinted" em embriões, fetos e placentas

A clonagem por transferência de núcleo é freqüentemente associada a resultados insatisfatórios devido à reprogramação nuclear anormal da célula somática doadora de núcleo e à expressão gênica alterada. O primeiro objetivo deste trabalho foi estudar a freqüência dos RNAs mensageiros das DNA metiltransferases (DNMT) 1, 3A e 3B, e do gene de expressão constitutiva gliceraldeído 3-fosfato desidrogenase (GAPDH) em blastocistos bovinos isolados produzidos in vivo e in vitro por transferência nuclear (TN) de célula somática, ativação partenogenética e fertilização in vitro (FIV). O segundo objetivo foi avaliar a expressão das DNMTs e dos genes "imprinted" IGF2, IGF2R e H19 em membranas cório-alantóide e fetos bovinos produzidos in vivo e in vitro por TN, ativação partenogenética e FIV e recuperados entre os dias 33 e 36 de gestação. Houve decréscimo (P<0,05) na freqüência do GAPDH nos blastocistos TN e partenogenéticos quando comparados aos embriões fertilizados, e também diferença entre blastocistos TN produzidos com diferentes protocolos de sincronização celular (células em G0 ou G1 do ciclo celular). Com relação às DNMTs, não foram identificados transcritos da DNMT1 nos blastocistos do grupo TN-G0; ocorreu diminuição na freqüência dos transcritos da DNMT3B nos embriões TN quando comparados aos partenotos. Não se observou diferença na freqüência relativa das DNA metiltransferases em membranas cório-alantóide e fetos. Com relação aos genes "imprinted", o grupo partenogenético apresentou menor nível de expressão de IGF2 em relação aos os demais grupos; baixos níveis de expressão de IGF2 e IGF2R foram observados, respectivamente, em amostras de feto e de cório-alantóide derivadas de animais clonados por TN, quando comparadas aos grupos fertilizados in vivo e in vitro

Cloning by nuclear transfer is often associated with poor results due to abnormal nuclear reprogramming of somatic cell donor and altered gene expression. The first objective of this study was to evaluate the frequency of DNA methyltranferases (DNMT) 1, 3A and 3B, and the housekeeping glyceraldehyde 3- phosphate dehydrogenase (GAPDH) mRNAs in single bovine blastocysts produced in vivo or in vitro by somatic cell nuclear transfer (SCNT), parthenogenetic activation and in vitro fertilization (IVF). The second objective was to evaluate the expression of DNMTs and imprinted genes IGF2, IGF2R and H19 in chorio-alantois membrane of bovine fetuses produced in vivo or in vitro by SCNT, parthenogenetic activation and IVF, and recovered between days 33 and 36 of gestation. There was strong GAPDH downregulation (P<0.05) in parthenogenetic and cloned by SCNT blastocysts when compared to fertilized ones, and also differences between cloned blastocysts produced with different cell synchronization (G0 or G1) protocol. Regarding DNMTs expression, we did not identify DNMT1 transcrips in SCNT-G0 derived blastocysts, and observed DNMT3B downregulation in SCNT-derived embryos when compared to parthenotes. No differences in DNA methyltransferase relative frequency were seen in chorio-alantois membrane and fetuses. Regarding imprinted genes expression, downregulation of IGF2 in the parthenogenetic group was observed in comparision to all other groups, and also, downregulation of IGF2 and IGF2R in the cloned-derived fetuses and chorio-alantois samples, respectively, were observed comparing to in vivo and in vitro fertilized groups