AgroReg: main regression models in agricultural sciences implemented as an R Package

Regression analysis is highly relevant to agricultural sciences since many of the factors studied are quantitative. Researchers have generally used polynomial models to explain their experimental results, mainly because much of the existing software perform this analysis and a lack of knowledge of other models. On the other hand, many of the natural phenomena do not present such behavior; nevertheless, the use of non-linear models is costly and requires advanced knowledge of language programming such as R. Thus, this work presents several regression models found in scientific studies, implementing them in the form of an R package called AgroReg. The package comprises 44 analysis functions with 66 regression models such as polynomial, non-parametric (loess), segmented, logistic, exponential, and logarithmic, among others. The functions provide the coefficient of determination (R2), model coefficients and the respective p-values from the t-test, root mean square error (RMSE), Akaike's information criterion (AIC), Bayesian information criterion (BIC), maximum and minimum predicted values, and the regression plot. Furthermore, other measures of model quality and graphical analysis of residuals are also included. The package can be downloaded from the CRAN repository using the command: install.packages("AgroReg"). AgroReg is a promising analysis tool in agricultural research on account of its user-friendly and straightforward functions that allow for fast and efficient data processing with greater reliability and relevant information.

Strategic diagnosis of a property specialized in breeding, rearing and finishing beef cattle in the southern region of Piauí

This study aimed to perform a strategic diagnosis on a property specialized in breeding, rearing and finishing beef cattle in the southern region of Piauí. It was conducted at Agropecuária Alvorada, located in the countryside, municipality of Bom Jesus, PI, Brazil. The farm develops the full cycle of beef cattle production, which is divided into breeding, rearing and finishing. A SWOT analysis (which stands for Strengths, Weaknesses, Opportunities and Threats) was carried out, consisting of an assessment of the property's internal and external environments. To evaluate the internal environment, an interview was held for data collection by means of questionnaires. The evaluation included: breeding management, sanitary management, nutritional management, infrastructure, workforce, technologies used in pasture formation, conservation and recovery, pasture management and zootechnical indices. To analyze the external environment, a group of people (experts) with deep knowledge of the subject addressed during the study was used as source of information. A matrix was generated with all the information from the SWOT analysis, strengths, weaknesses, opportunities and threats, culminating with the establishment of strategies to increase the productive efficiency of the cattle raising activity.(AU)

Cryptosporidium spp. in dogs - prevalence and genotype distribution

Background: Cryptosporidium spp. is a zoonotic protozoan parasite that affects the gastrointestinal tract of humans and animals. The disease can cause acute and chronic diarrhoea and even death in both humans and animals. In this study, it was aimed to determine the prevalence and genotype distribution of Cryptosporidiosis in shelter dogs in Diyarbakir province located in the Southeastern Anatolia Region of Turkey. Materials, Methods & Results: The animal material of the study consisted of 100 dogs of different breeds and sexes. Faecal samples were collected from the rectum with disposable latex gloves and placed in individual sample containers. All of the samples were examined for Cryptosporidium spp. by Kinyoun Acid Fast and Nested PCR methods. In the Kinyoun Acid Fast staining method, firstly, smear preparations were prepared from fresh faecal samples, fixed in pure methanol for 1 min and allowed to dry. The slides were kept in Kinyoun Carbol-Fuxin for 5 min, dipped in 50% ethyl alcohol, shaken, washed in tap water, kept in 1% sulphuric acid for 2 min and washed in tap water. The slides were kept in methylene blue for 1 min, washed in tap water and allowed to dry. After drying, immersion oil was dripped and examined under a microscope at 100 magnification. DNA extraction was performed from all samples using GeneMATRIX Stool DNA Purification Kit according to the manufacturer's protocol. After Nested PCR analysis was performed. In the PCR step, primers 5'-TTCTAGAGCTAATACATGCG-3' and 5'- CCCATTTCCTTCCTTCGAAACAGGA-3' were used to amplify the 1325 bp gene region. In the nested PCR step, primers 5'- GGAAGGGTTGTATTTATTTATTAGATAAAG-3' and 5'-AAGGAGTAAGGAACAACCTCCA-3' were used to amplify the 826-864 bp gene region. As a result of both methods, a prevalence of 3% was determined. The infection rate was higher in males (3.57%) than females (2.27%) and in younger than 1 year (5.56%) than in older than 1 year (1.56%). The DNA sequences obtained from the sequence analysis of 3 positive PCR samples were analysed in BioEdit software. A phylogenetic tree was constructed with the data set created by using the 18s rRNA gene sequences obtained from the NCBI genbank database and the DNA sequences obtained as a result of the study, and it was shown which Cryptosporidium species the study samples were related to. Today, many Cryptosporidium species have been identified and most of these species have host adaptation. Although C. canis is the most common species in dogs, C. muris, C. meleagridis, and C. parvum have also been detected. Among these species, C. parvum is recognized as a zoonotic species infecting a wide range of mammals. In this study, DNA sequencing of nested PCR positive samples revealed that 3 samples were zoonotic C. parvum. Discussion: This suggests that dogs may be a reservoir for zoonotic transmission of Cryptosporidium. Consequently, it is recommended that people should be informed about the potential for transmission of this protozoan to humans and animals and that control programmes should be implemented, including the prevention of free entry of stray dogs into public places and homes.

Pharmacokinetic Profile of Norfloxacin in Pigeons / Perfil Farmacocinético da Norfloxacina em Pombos

Through this work, the pharmacokinetics of Norfloxacin in pigeons were explored by using six healthy male pigeons as the subjects for this study. The pharmacokinetic indices of orally administered Norfloxacin were obtained by microbiological assay and then the data were fitted to the two-compartment pharmacokinetic open model to evaluate the distribution and excretion parameters.In the achieved results, the calculated absorption rate constant (Kab) was 1.26 h-1, the maximum achieved concentration of Norfloxacin was 2.75 µg/ml at 1.34 hr., the volume of distribution (Vd/F) was 3.15 L/kg.The half-life (t1/2ß) was 4.9 hrs., the calculated area under the curve of Norfloxacin (AUC0-t) was 16.75 (h*µg)/ml, while the clearance of Norfloxacin (Cl/F) was 0.49 L/hr/kg.In conclusion, the pharmacokinetic parameters of Norfloxacin in pigeons are not far away from other birds like chickens, considering the differences among them. Norfloxacin is a valuable antibacterial agent against susceptible bacterial infections depending on the obtained pharmacokinetic profile.(AU)

Através deste trabalho, a farmacocinética da Norfloxacina em pombos foi explorada usando seis pombos machos saudáveis como sujeitos para este estudo. Os índices farmacocinéticos da norfloxacina, administrada por via oral, foram obtidos por ensaio microbiológico e, em seguida, os dados foram ajustados ao modelo aberto de farmacocinética de dois compartimentos para avaliar os parâmetros de distribuição e excreção. Nos resultados obtidos, a taxa constante de absorção (Kab) calculada foi de 1,26 h-1, a concentração máxima alcançada da Norfloxacina foi de 2,75 µg/ml em 1,34 h, o volume de distribuição (Vd/F) foi de 3,15 L/kg. A meia-vida (t1/2ß) foi de 4,9 h, a área calculada sob a curva de concentração da Norfloxacina (AUC0-t) foi de 16,75 (h*µg)/ml, enquanto a depuração da Norfloxacina (Cl/F) foi de 0,49 L/h/kg. Em conclusão, os parâmetros farmacocinéticos da Norfloxacina em pombos não estão muito longe de outras aves, como galinhas, considerando as diferenças entre eles. A norfloxacina é um agente antibacteriano valioso contra infecções bacterianas susceptíveis, dependendo do perfil farmacocinético obtido.(AU)

Natural Growth Promoters Replacing Traditional Growth Promoters in Diets for Light Replacement Pullets: A Systematic Approach

The effect of using natural growth promoters (NGP) to replace traditional antimicrobials on performance, biometry of digestive and reproductive organs, sexual maturity and bone characteristics of replacement pullets was evaluated; and the relationship between these variables according to the diets was verified. Eight-week-old birds were randomly assigned to a completely randomized design and fed different diets: negative control (without growth promoters); positive control - conventional growth promoter; organic acids (OA); symbiotic (S); essential oil (EO); OA + S; and EO + S. The performance, relative weight of digestive and reproductive organs and length intestines, height and crest length, sternum length, bone quality and sexual maturity of birds were similar (p>0.05) between treatments. The heat map combined with cluster analysis showed a uniform static pattern with the formation of three horizontal groups formed by the treatments: 1) negative control, S and OA + S; 2) positive control and OE and 3) OA and OE + S. A null relationship between the treatments and the variables under study was observed. The principal components analysis revealed an association of variables in three components with 60.55% of variation. NGP can replace traditional promoters, as they do not interfere with performance, biometrics or sexual maturity. Height and length are predictive variables for the development of reproductive organs, especially the oviduct. A similarity was identified through multivariate techniques between symbiotic and organic + symbiotic acids; positive control and essential oils; and organic and symbiotic acids + essential oils.(AU)

Investigation of Egg Weight, Ovarian Follicles Morphology and Growth Differentiation Factor 9 mRNA Expression in Potchefstroom Koekoek Chicken Breed

The growth differentiation factor 9 (GDF9) gene plays a vital role in the growth and maturation of ovarian follicles in laying hens. However, its messenger ribonucleic acid (mRNA) expression levels in preovulatory ovarian follicles of indigenous chickens remain poorly understood. The study aimed to identify the association between egg weight and egg quality traits, ovarian follicles morphology, and mRNA expression levels of the GDF9 gene in pre-ovulatory ovarian follicles of the South African Potchefstroom Koekoek chicken breed. The correlation results showed that egg weight (EW) had a positively high significant correlation (p<0.01) with egg width (EWD), yolk weight (YW), shell surface area (SSA), albumen weight (AW), albumen ratio (AR) and egg volume (EV), and a positive significant correlation (p<0.05) with egg length (EL). The Student's T-test results revealed that the numbers of large yellow follicles were significantly lower (p<0.05) than those of small yellow follicles. ANOVA findings showed that there was a significant difference (p<0.05) in the average weight of the large yellow follicles. The quantitative Reverse Transcription Polymerase Chain Reaction (RT-qPCR) findings indicated that there were significant differences (p<0.05) in the mRNA expression levels of the GDF9 gene in preovulatory ovarian follicles of the Potchefstroom Koekoek chicken breed. The mRNA expression was more abundant in F1 and F4 than in other ovarian follicles.(AU)

Production components of agroindustrial interest of sugarcane varieties under subsurface drip irrigation in semiarid conditions

The identification of promising commercial varieties for irrigated crops in semiarid conditions based on characters of interest to sugarcane agro-industries is important, considering the search for high sugarcane yields to obtain sustainable crops. Thus, the objective of this work was to evaluate production components of agroindustrial interest of different sugarcane varieties grown under subsurface drip irrigation in the Semiarid region of Brazil, during two crop cycles. A randomized block experimental design was used, in an 8×2 factorial arrangement (varieties and cycles) with three replications. The sugarcane juice quality, sugar yield, and culm yield were evaluated in each cycle. Gross sugar percentage, sugarcane culm yield, juice apparent sucrose content, and juice purity were affected by the crop cycles. Soluble solids content presented strong significant correlation with most variables of agroindustrial interest. The path coefficient analysis showed that juice apparent sucrose content was the explanatory character with higher direct effect on soluble solids and that this variable presented high indirect effects on most explanatory variables. The sugarcane varieties RB72454 and Q124 are recommended for production managements with drip irrigation under semiarid conditions. Soluble solids content can be used as an alternative for direct selection of varieties with higher sugar yields in different cycles.(AU)

Estimated correlations of ultrasound carcass measurements and physical-chemical components of Santa Ines sheep meat

A avaliação da composição da carcaça do gado gera informações relevantes sobre a qualidade e rendimento final dos produtos cárneos. O objetivo deste trabalho foi avaliar as correlações das medidas ultrassonográficas in vivo do Longissimus lumborum com os componentes físico-químicos de ovinos Santa Inês de um ano de idade criados em sistema extensivo. A avaliação ultrassonográfica foi realizada da área de olho de lombo (USrea), profundidade do lombo (USld), largura do lombo (USlw) e espessura de gordura subcutânea (USsft). Após o abate, os cortes de carne foram pesados ​​e o rendimento de carcaça calculado. dia 12a costela do lado esquerdo foi separada da carcaça e dissecada, após o que ossos, músculos e gordura individuais foram separados e pesados. Os componentes foram reagrupados, triturados e coletados para avaliação centesimal. Correlações positivas significativas (p < 0,05) foram encontradas entre as medidas de ultrassom e as métricas de carne, exceto para o comprimento do lombo, que apresentou baixa correlação. Correlações significativas (p < 0,05) foram encontradas entre os músculos e as medidas de USld, USrea e USsft. As correlações (p < 0,05) entre os ossos e USld e USrea foram negativas e significativas. USsft apresentou correlação (p < 0,05) com o rendimento de carcaça. Assim, as medidas de ultrassom associadas ao Longissimus lumborumpode constituir uma valiosa ferramenta para avaliação dos componentes físico-químicos e da carcaça de ovinos Santa Inês de um ano de idade criados em sistemas extensivos.(AU)

Using canonical correlation analysis to understand the rumen biohydrogenation patterns of linoleic and alpha-linolenic acids in the rumen fluid of bovines

The objective of this study was to determine the multivariate relationship among linoleic acid, alpha-linolenic acid, and their main rumen biohydrogenation (BH) intermediates and products in bovine rumen fluid using canonical correlation analysis (CCA). A dataset consisting of 1177 observations generated by 107 in vitro rumen incubation systems of pure and mixed linoleic acid (18:2-c9, c12) and alpha-linolenic acid (18:3-c9, c12, c15) was gathered. Two canonical variates were defined: A: composed of the nine main BH intermediates and products (18:2-c9, t11; 18:2-t11, c15; 18:1-t11; 18:1-t9; 18:1-t6; 18:1-c11; 18:1-c6; 18:1-c9; 18:0) of 18:2-c9, c12 and 18:3-c9, c12, c15 and B: composed of 18:2-c9, c12 and 18:3-c9, c12, c15. Two canonical functions between A and B with significant canonical correlations (R1=0.990 and R2=0.738; p <0.01) were obtained. However, only the first function was selected for CCA. Exploration of canonical loadings for first function, revealed the following quantitative significance (absolute value) order for fatty acids (FA) within their respective canonical variates: A: 18:0(0.958)>18:1-t9(0.837)>18:1-c11(0.835)>18:1-c6(0.824)>18:1-t11(0.747)>18:1-c9(0.738)>18:1-t6(0.415)>18:2-t11, c15(0.387)> 18:2-c9, t11(0.239); B: 18:2-c9, c12(0.667)>18:3-c9, c12, c15(0.488). The CCA showed that 18:2-c9, c12 has a greater contribution than that of 18:3-c9, c12, c15 on the production of the aforementioned BH intermediates, in which 18:0, as well as the groups of 18:1 cis and trans-FA were mainly affected.(AU)

Combined agricultural practices in millet and cactus: phyllochron, structural characteristics and relations with yield

Variation in rainfall affects crops; therefore, agricultural practices become essential for forage production in semi-arid regions. This study aimed to evaluate the influence of different agricultural practices on phyllochron, structural characteristics of forage cactus and millet, and their relations with crop yield using the principal component analysis (PCA). The design was in randomized blocks, with six treatments: sole cropped cactus without straw mulching, sole cropped cactus with straw mulching, sole cropped millet without straw mulching, sole cropped millet with straw mulching, and cactus intercropping with millet, with and without straw mulching, each with four replicates. There were three cactus cycles and nine millet cycles (three cycles of cultivars BRS1501 and six of IPA Bulk-1-BF). Biometric parameters were evaluated monthly, while yield was determined after the crop harvest. Phyllochron was determined with the regression analysis. The PCA was applied to structural characteristics and yield. The systems adopted did not influence the structural characteristics of cactus and millet ( p > 0.05), except for cladode thickness, which increased with straw mulching. Phyllochron of the millet reduced when the crop was intercropped. The structural characteristics of cladode length, width, and thickness influenced crop yield, mainly in systems with straw mulching. Straw mulching and intercropping alter phyllochron of cactus and millet. The adoption of straw mulching has a more significant relationship with cactus yield, whereas biometric variables influence crop yield for millet, not the cropping system.(AU)

Morphometric analysis and roosting ecology of bat species Pteropus Medius in Mansehra, Khyber Pakhtunkhwa, Pakistan / Análise morfométrica e ecologia de poleiro de espécies de morcegos Pteropus Medius em Mansehra, Khyber Pakhtunkhwa, Paquistão

Morphometric measurement and roosting ecology of Pteropus medius were aimed to find out in Mansehra district of KP, Pakistan. Total 3149 numbers of bats were found in eight biological spots visited; Baffa Doraha, Darband, Dadar, Jallu, Hazara University, Garhi Habibullah Chattar Plain and Jabori, in total 299 numbers of different species of trees including; Morus alba, Pinus raxburghi, Eucalyptus camaldulensis, Morus nigra, Grevillea robusta, Brousonetia papyrifera,Platanus orientalis, Ailanthus altissima, Hevea brasiliensis and Populus nigra. Morphometric features were measured and found vary according to sex of the bats. The average wing span, wing`s length from tip of wing to neck, from thumb to tip of wing and the body`s length from head and claws were recorded to be 102.98 cm, 49.07cm, 28.7 cm and 22.78 cm respectively in males while 93.67 cm, 44.83cm, 24.78cm and 22.78 cm respectively in female bats. Mean circumference of the body including wings and without wing were measured as 22.78 cm and 17.29 cm in males and that of female were 20.07 cm and 16.9 cm. Average length of thumb 3.64 cm, ear`s length 3.1 cm, snout 5.62cm, eye length were 1.07 cm for both sexes and length between the feet in extended position were16.3 cm. Generally different measurement of males bodies were found to be greater than female such as mean body surface area, mass, volume and pressure were found to be 2691.79 cm2, 855.7gm,1236.4 ml and 295.77 dyne/ c m 3for male and 2576.46 cm2, 852.71gm,1207 ml and 290.2 dyne/ c m 3 respectively for female. While weight and density for both males and females bats were same with mean of 8.59 newton and 0.701 g/m3. Findings of current reports can add valued information in literature about bats, which can be used for species identification and conservation.

A medição morfométrica e a ecologia de poleiro de Pteropus medius foram realizadas no distrito de Mansehra de KP, Paquistão. Foram encontrados 3.149 morcegos em 8 pontos biológicos visitados; Baffa Doraha, Darband, Dadar, Jallu, Universidade Hazara, Garhi Habibullah Chattar Plain e Jabori, no total 299 números de diferentes espécies de árvores, incluindo: Morus alba, Pinus raxburghi, Eucalyptus camaldulensis, Morus nigra, Grevillea robusta, Brousonetia papyrifera, Platanus orientalis, Ailanthus altissima, Hevea brasiliensis e Populus nigra. As características morfométricas foram medidas e variam de acordo com o sexo dos morcegos. A envergadura média da asa, o comprimento da asa da ponta da asa ao pescoço, do polegar à ponta da asa e o comprimento do corpo da cabeça e garras foram registrados em 102,98 cm, 49,07 cm, 28,7 cm e 22,78 cm, respectivamente, nos machos. Enquanto 93,67 cm, 44,83 cm, 24,78 cm e 22,78 cm respectivamente, nas fêmeas. As circunferências médias do corpo incluindo asas e sem asas foram medidas de 22,78 cm e 17,29 cm nos machos e as das fêmeas foram 20,07 cm e 16,9 cm. O comprimento médio do polegar 3,64 cm, comprimento da orelha 3,1 cm, focinho 5,62 cm, comprimento dos olhos 1,07 cm para ambos os sexos e comprimento entre os pés em posição estendida foi de 16,3 cm. Geralmente, as medidas diferentes dos corpos masculinos foram maiores que as femininas, como a área de superfície corporal média, massa, volume e pressão foram encontrados em 2691,79 cm2, 855,7 gm,1236,4 ml e 295,77 dines para masculino e 2576,46 cm2, 852,71 gm, 1207 ml e 290,2 dines respectivamente para fêmeas. Enquanto o peso e a densidade para machos e fêmeas de morcegos foram os mesmos com média de 8,59 N e 0,701 g/m3. Os achados de relatórios atuais podem agregar informações valiosas na literatura sobre morcegos, que podem ser utilizadas para identificação e conservação de espécies.

Corn productivity and topdressing application cost of nitrogen fertilizers / Produtividade de milho e custo da aplicação em cobertura de fertilizantes nitrogenados

Nitrogen(N) is the most required nutrient in the cultivation of corn (Zea maysL.), also representing a significantshare in the production costs. The objective was to evaluate the efficiency for one experimental year of different sourcesof nitrogen fertilizers applied in topdressing on the corn grain yield and their respective fertilization costs. The experiment was carried out under field conditions and without irrigation under no-tillage system, in a Red Oxissol. For sowing, 280 kg ha-1of NPK fertilizer 12-30-20 was used for all treatments. In addition to the control treatment (NPK), four nitrogen formulations wereapplied in topdressing: Urea, Super N, Nitromag, and Sulfammo, both formulations applied 50% in the V3/V4 and 50% V7/V8 stages, in four replicates.Grain yield was determined at the physiological maturation. The type of nitrogen fertilizer did not influence corn grain yield, an average of 9016 kg ha-1. The largest profits were achieved with the application of Super N, Urea and Nitromag. Nitrogen fertilizers with slow and controlled N release does not promote an increase in corn grain yield in relation to Urea. The use of Super N in topdressing has the highest profitability in corn cultivation.(AU)

O nitrogênio (N) é o nutriente mais requerido no cultivo do milho (Zea maysL.), ainda representa significativa participação no custo de produção. O objetivo foi avaliar a eficiência em um ano experimental de diferentes fontes de fertilizantes nitrogenados aplicados em cobertura na produtividade de grãos demilho e os seus respectivos custos da adubação. O experimento foi realizado em condições de campo e sem irrigação sob sistema plantio direto, em Latossolovermelho. Na semeadura foi utilizado 280 kgha-1de adubo NPK 12-30-20 para todos os tratamentos. Além do tratamento testemunha (NPK), quatro formulações nitrogenadas foram aplicadas em cobertura: Ureia, Super N, Nitromag, e Sulfammo, ambas as formulaçõesaplicadas 50% no estádioV3/V4 e 50% V7/V8,em quatro repetições. Na maturação fisiológica foi determinada a produtividade de grãos.O tipo de fertilizante nitrogenado não influenciou na produtividade de grãos de milho, média de 9016 kg ha-1. Os maiores lucros foram com a aplicação de Super N, Ureia e Nitromag. O uso em cobertura de fertilizantes nitrogenados de lenta e controlada liberação de N não promovem aumento na produtividade de grãos de milho em relação a Ureia. O uso de Super N em cobertura apresenta a maior lucratividadeno cultivo do milho.(AU)

Energy values and metabolizability coefficients of maize kernels with different specific gravities / Valores energéticos e coeficientes de metabolizabilidade de grãos de milho com diferentes densidades específicas

The aim of this study was to examine the influence of the specific gravity of maize kernels on physicochemical traits, energy values, and metabolizability coefficients. Pearson's correlations were evaluated between specific gravity (kg/m3) and crude protein (%); ether extract (%); crude fiber (%); gross energy (%); presence of fumonisins (ppb) and aflatoxins (ppb); and kernel quality (good, rotten, weevil-damaged, broken, and shriveled kernels, %). A metabolism trial was conducted with diets containing maize fractions of different specific gravities for male broilers from 14 to 21 days of age. Apparent metabolizable energy (AME), nitrogen-corrected AME (AMEn), and the metabolizability coefficients of dry matter (MCDM), crude protein (MCCP), ether extract (MCEE), calcium (MCCa), and phosphorus (MCP) were evaluated. The experiment consisted of five treatments (reference diet and diets with 40% replaced with maize at five specific gravities (740, 740, 760, or 800 kg/m3). Eight replications were used, totaling 400 broilers chickens. The Scott-Knott test was applied and regression equations were fitted to compare the treatments. Specific gravity had moderate correlations with good and broken kernels and low-magnitude correlations with chemical parameters. Increasing specific gravities caused AME and AMEn to increase linearly when analyzed on an as-is basis; and to respond quadratically when expressed on a dry-matter basis. The specific gravity of 780 kg/m3 provided the lowest MCDM, MCCP, MCCa, and MCP values, whereas the lowest MCEE, was found at the lowest density. It was not possible to determine the best nutritional composition or the best metabolizability coefficients.(AU)

Objetivou-se avaliar a influência da densidade do grão de milho sobre características físico-químicas, valores energéticos e de metabolizabilidade aparente. Avaliou-se a correlação entre a densidade específica (kg/m3) e os parâmetros: proteína bruta (%); extrato etéreo (%); fibra bruta (%); energia bruta (%); presença de fumonisinas (ppb) e aflatoxinas (ppb); umidade (%); grãos bons, quebrados, chochos, carunchados e ardidos, em Percentagem. Um ensaio de metabolismo com dietas contendo diferentes densidades específicas do grão de milho, para frango de corte, no período de 14 a 21 dias de idade, foi conduzido para avaliar a energia metabolizável aparente (EMA) e a corrigida pelo balanço de nitrogênio (EMAn), os coeficientes de metabolizabilidade: matéria seca (CM_MS), proteína bruta (CM_PB), extrato etéreo (CM_EE), cálcio (CM_Ca) e fósforo (CM_P). O experimento foi composto por cinco tratamentos (dieta referência e dietas substituindo 40% desta com milhos de densidades específicas: 740 kg/m3, 760 kg/m3, 780 kg/m3 e 800 kg/m3), com oito repetições, totalizando 400 frangos machos. As médias foram comparadas pelo teste de Scott-knott e estimada as equações de regressão nas diferentes densidades específicas das frações de milho. As correlações entre a densidade específica e grãos bons e quebrados foram de moderada magnitude e com os parâmetros químicos foram de baixa magnitude. Com o aumento da densidade específica para EMA e EMAn na matéria natural obteve-se resposta linear decrescente, enquanto na matéria seca, foi quadrático. Para CMMS, CMPB, CMCA e CMP a densidade de 780 kg/m3 apresentou os menores valores, enquanto para CMEE, o menor valor foi para a menor densidade específica. Não foi possível determinar a fração de milho com melhor composição nutricional e melhores coeficientes de metabolizabilidade.(AU)

Dynamic organization of two agroforestry systems in the semi-arid region of Paraíba and their contribution to improving the socio-economic conditions of farming families / Caracterização e organização dinâmica de dois sistemas agroflorestais no semiárido paraibano e sua contribuição para melhoria das condições socioeconômicas de famílias agricultoras

ABSTRACT: The socio-economic vulnerability of family farmers in Brazilian semi-arid regions, combined with the intense degradation of the Caatinga biome, entails the use of alternatives that allow people to remain in the countryside while recovering the environment. Are agroforestry systems (AFS), which are based on the ecological, economic, and social interactions existing in a production system, an alternative? The present study described the structure, organization, and floristic composition of two AFS and analyzed the soil fertility of the two AFSimplanted in the semi-arid region of Paraíba. This study revealed that the farmers consider the AFS to be less harmful to the environment as it provides greater protection to the soil and better-qualityfood. Thegreatest challenges wereobtaining water during drought season and the need foran extra workforce. Nevertheless, the produce from these systemswas sufficient to provide for the families. Several varieties of fruit species were found in both the AFS studied, and Malpighia emarginata (acerola) was the most predominant. The soils of the two AFS presented a practically neutral pH the and high percentage of base saturation,thereby falling under the category of eutrophic soil with high fertility, and are ideal for growingany type of crop.

RESUMO: A vulnerabilidade socioeconômica dos agricultores familiares no semiárido brasileiro aliado à intensa degradação do bioma caatinga requer o emprego de alternativas que propiciem a permanência do homem no campo, ao mesmo tempo em que recupere o meio ambiente. Os Sistemas Agroflorestais (SAFs) que estão fundamentados nas interações ecológicas, econômicas e sociais existentes em um sistema de produção, são alternativas? O presente estudo tem como objetivos descrever a estrutura, a composição florística e a organização de dois SAFs implantados no sertão paraibano, bem como analisar a fertilidade dos solos das propriedades sob estes sistemas. Este trabalho verificou que os agricultores consideram que os SAFs proporcionam menos agressão ao meio ambiente, maior proteção ao solo e alimentação de qualidade, além da manutenção das famílias com a produção. As duas maiores dificuldades são a obtenção de água nos períodos de estiagem e mão de obra auxiliar. Nos dois SAFs estudados, há uma maior quantidade de espécies frutíferas, sendo a Malpighia emarginata (acerola) a de maior predominância. Os solos dos dois SAFs apresentam pH praticamente neutro e elevado percentual de saturação por base, sendo considerados eutróficos, com alto nível de fertilidade e ideal para o estabelecimento de agricultura.

Genetic diversity of Shepherd dog using pedigree analysis / Diversidade genética em cães da raça Pastor Alemão utilizando análise de pedigree

ABSTRACT: The German Shepherd dog breed is the most popular breed globally and in Brazil. The study of the population structure through pedigree information is an essential tool to understand the history of the Brazilian German Shepherd dog breed. This study evaluated the status of genetic diversity and population structure of the Brazilian German Shepherd dog breed. The pedigree included a total of 77,938 animals born between 1970 and 2014. The average generation interval in this population was 3.91 years. Considering the reference population, 2,183 founders were identified. Approximately 3% of the genetic diversity of the current population (2010-2014) was lost, most of which was due to genetic drift. The effective population size was relatively small, and the pedigree showed bottlenecks indicating a loss of genetic diversity in this breed. These results indicated the need to adopt measures against the excessive increase in inbreeding and monitor effective population size to minimize genetic diversity loss.

RESUMO: A raça Pastor Alemão é uma das raças mais populares no mundo e no Brasil. O estudo da estrutura populacional por meio de informações de pedigree é uma ferramenta essencial para o entendimento da história dessa raça no Brasil. Objetivou-se com o estudo avaliar o status da diversidade genética e da estrutura populacional de cães da raça Pastor Alemão. O pedigree incluiu um total de 77.938 animais nascidos entre 1970 e 2014. O intervalo médio de geração nesta população foi de 3,91 anos. Considerando a população de referência, foram identificados 2.183 fundadores. Cerca de 3% da diversidade genética da população atual (2010-2014) foi perdida, a maior parte devido à deriva genética. O tamanho efetivo da população foi relativamente pequeno e o pedigree apresentou gargalos indicando uma perda de diversidade genética nesta raça. Esses resultados indicam a necessidade de adoção de medidas contra o aumento excessivo da endogamia e do monitoramento do tamanho efetivo da população para minimizar a perda de diversidade genética.

Dynamic organization of two agroforestry systems in the semi-arid region of Paraíba and their contribution to improving the socio-economic conditions of farming families / Caracterização e organização dinâmica de dois sistemas agroflorestais no semiárido paraibano e sua contribuição para melhoria das condições socioeconômicas de famílias agricultoras

The socio-economic vulnerability of family farmers in Brazilian semi-arid regions, combined with the intense degradation of the Caatinga biome, entails the use of alternatives that allow people to remain in the countryside while recovering the environment. Are agroforestry systems (AFS), which are based on the ecological, economic, and social interactions existing in a production system, an alternative? The present study described the structure, organization, and floristic composition of two AFS and analyzed the soil fertility of the two AFSimplanted in the semi-arid region of Paraíba. This study revealed that the farmers consider the AFS to be less harmful to the environment as it provides greater protection to the soil and better-qualityfood. Thegreatest challenges wereobtaining water during drought season and the need foran extra workforce. Nevertheless, the produce from these systemswas sufficient to provide for the families. Several varieties of fruit species were found in both the AFS studied, and Malpighia emarginata (acerola) was the most predominant. The soils of the two AFS presented a practically neutral pH the and high percentage of base saturation,thereby falling under the category of eutrophic soil with high fertility, and are ideal for growingany type of crop.

A vulnerabilidade socioeconômica dos agricultores familiares no semiárido brasileiro aliado à intensa degradação do bioma caatinga requer o emprego de alternativas que propiciem a permanência do homem no campo, ao mesmo tempo em que recupere o meio ambiente. Os Sistemas Agroflorestais (SAFs) que estão fundamentados nas interações ecológicas, econômicas e sociais existentes em um sistema de produção, são alternativas? O presente estudo tem como objetivos descrever a estrutura, a composição florística e a organização de dois SAFs implantados no sertão paraibano, bem como analisar a fertilidade dos solos das propriedades sob estes sistemas. Este trabalho verificou que os agricultores consideram que os SAFs proporcionam menos agressão ao meio ambiente, maior proteção ao solo e alimentação de qualidade, além da manutenção das famílias com a produção. As duas maiores dificuldades são a obtenção de água nos períodos de estiagem e mão de obra auxiliar. Nos dois SAFs estudados, há uma maior quantidade de espécies frutíferas, sendo a Malpighia emarginata (acerola) a de maior predominância. Os solos dos dois SAFs apresentam pH praticamente neutro e elevado percentual de saturação por base, sendo considerados eutróficos, com alto nível de fertilidade e ideal para o estabelecimento de agricultura.

Genetic diversity of Shepherd dog using pedigree analysis / Diversidade genética em cães da raça Pastor Alemão utilizando análise de pedigree

The German Shepherd dog breed is the most popular breed globally and in Brazil. The study of the population structure through pedigree information is an essential tool to understand the history of the Brazilian German Shepherd dog breed. This study evaluated the status of genetic diversity and population structure of the Brazilian German Shepherd dog breed. The pedigree included a total of 77,938 animals born between 1970 and 2014. The average generation interval in this population was 3.91 years. Considering the reference population, 2,183 founders were identified. Approximately 3% of the genetic diversity of the current population (2010-2014) was lost, most of which was due to genetic drift. The effective population size was relatively small, and the pedigree showed bottlenecks indicating a loss of genetic diversity in this breed. These results indicated the need to adopt measures against the excessive increase in inbreeding and monitor effective population size to minimize genetic diversity loss.

A raça Pastor Alemão é uma das raças mais populares no mundo e no Brasil. O estudo da estrutura populacional por meio de informações de pedigree é uma ferramenta essencial para o entendimento da história dessa raça no Brasil. Objetivou-se com o estudo avaliar o status da diversidade genética e da estrutura populacional de cães da raça Pastor Alemão. O pedigree incluiu um total de 77.938 animais nascidos entre 1970 e 2014. O intervalo médio de geração nesta população foi de 3,91 anos. Considerando a população de referência, foram identificados 2.183 fundadores. Cerca de 3% da diversidade genética da população atual (2010-2014) foi perdida, a maior parte devido à deriva genética. O tamanho efetivo da população foi relativamente pequeno e o pedigree apresentou gargalos indicando uma perda de diversidade genética nesta raça. Esses resultados indicam a necessidade de adoção de medidas contra o aumento excessivo da endogamia e do monitoramento do tamanho efetivo da população para minimizar a perda de diversidade genética.

Pyometra in queens - changes in haemato-biochemical parameters

Background: Pyometra is a bacterial and hormone-induced reproductive disease that occurs in the post-estrus luteal phase in intact queens. Pyometra is more common in the diestrus period due to the high progesterone concentration (in queens that mated, spontaneously ovulated, or were induced to ovulate). However, it can also be seen due to the use of exogenous hormones such as progesterone for the suppression of estrus. More research is needed in cases of pyometra in queens, as well as in bitches. Because, considering that the pathogenesis and characteristics of feline pyometra is similar to bitches, studies on pyometra-affected bitches are taken as reference in studies and applications on queens. From this point of view, the aims of this study were to reveal the changes in complete blood count, blood gas, and serum biochemistry parameters in feline pyometra cases and to determine the correlation between the mentioned parameters. Materials, Methods & Results: In the study, a total of 25 female cats of different breeds were used, between the ages of 6 months and 7 years, 15 were diagnosed with pyometra, and 10 healthy. Anamnesis, clinical findings, and ultrasonographic examinations were used in the diagnosis of pyometra. Abdominal ultrasonography was performed on queens brought to the clinic with complaints such as anorexia, polydipsia, polyuria, abdominal tension, and fever. The control group (n =10) consisted of queens that were introduced to the clinic and were reproductively healthy. Before any treatment in queens with pyometra and the control group, 1 mL blood samples were taken from v. cephalica to evaluate complete blood count, blood gases and serum biochemistry parameters. In complete WBC, Lym, Mon, Gra, RBC, Hb, HCT, MCV, MCH and PLT parameters and, blood gas parameters such as pH, pCO2 , pO2 , sO2 , Na, K, Cl, lactate, glucose, HCO3 , and BE were also evaluated in taken blood samples. Biochemical parameters BUN, creatinine, ALT, AST, ALP, amylase, T.BIL, D.BIL, P, CHOL, TG, LDH, TP, CPK, ALP, Ca, GGT were measured in serum samples. After examination and laboratory analysis, ovariohysterectomy was performed on queens as a treatment. Granulocyte, WBC, HCT and MCH levels of the pyometra group were higher (P < 0.05) and Lym levels were lower (P < 0.05) compared to the control group. According to these results, pH, HCO3 , and BE were lower (P < 0.05) in queens with pyometra than those in the control group, while Na and lactate parameters were higher (P < 0.05). According to the results of biochemical analysis, it was determined that BUN, creatinine levels, GGT, and LDH enzyme activities were found to be higher in the pyometra group compared to the control group, while the Ca level was found to be low (P < 0.05). A positive correlation was observed between BUN and creatinine and LDH, WBC, granulocyte, HCT, and lactate, and a negative correlation between lymphocytes, pH, and BE in the correlation analysis performed on queens with pyometra and control group. However, a positive correlation was observed between creatinine and LDH and HCT, and a negative correlation between lymphocyte, pH and BE. Discussion: There is not enough information about pyometra in queens. As a result, it was determined that there were significant changes in complete blood count, blood gases and serum biochemical parameters in queens with pyometra in this study. These changes were generally thought to be related to dehydration and sepsis or endotoxemia. In addition, it was evaluated that prerenal azotemia occurring in pyometra affected queens may cause renal dysfunction. For this reason, it is thought that the results obtained in the presented study may contribute to the diagnosis, treatment, and prognosis of pyometra cases in queens.

Morphology and molecular phylogeny of trypanorhynchid metacestodes infecting commercial fish of the Mediterranean Sea / Morfologia e filogenia molecular das metacestodes de tripanorhynchid que infectam os peixes comerciais do Mar Mediterrâneo

Members of the order Trypanorhyncha are cestode parasites that are frequently found infecting the muscles of several marine fish species, affecting fish health, and resulting in consumers' rejection of fish. Fifty-two specimens of marine fish were freshly caught throughout the year 2020 from boat landing sites at the Alexandria coast along the Mediterranean Sea in Egypt, including the grey trigger fish Balistes carolinensis (F: Balistidae); the mottled grouper Mycteroperca rubra (F: Serranidae) and the common sole Solea vulgaris (F: Soleidae). Blastocysts were isolated and ruptured; the generated pleurocerci were described morphologically and morphometrically by light and scanning electron microscopy. Also, multiple-sequence alignment was performed, and a phylogenetic tree was constructed following maximum likelihood analysis of the 18s and 28s ribosomal RNA sequences of the recovered worms. Thirty fish were infected; the infection was recorded as blastocysts embedded in fish flesh. Three different parasitic species were recovered and classified morphologically as Gymnorhynchus isuri, Pseudotobothrium dipsacum and Heteronybelinia estigmena. The taxonomic position of these parasites was justified by molecular analysis of their 18s and 28s rRNAs, which revealed high percentages of homology with species recovered from the GenBank. The accession numbers ON157059, ON139663 and ON139662 were respectively assigned to the recovered parasites after their deposition in GenBank. The results obtained from the molecular analyses confirmed the morphological records of the recovered parasites. Since metacestodes are found in the musculature of infected fish specimens, it is necessary to remove these areas in the commercialization of fish.

Os membros da ordem Trypanorhyncha são parasitas de cestóides que são freqüentemente encontrados infectando os músculos de várias espécies de peixes marinhos, afetando a saúde dos peixes e resultando na rejeição do peixe por parte dos consumidores. Cinqüenta e dois espécimes de peixes marinhos foram capturados recentemente durante todo o ano de 2020 nos locais de desembarque de barcos na costa de Alexandria ao longo do Mar Mediterrâneo, no Egito, incluindo o peixe de gatilho cinzento Balistes carolinensis (F: Balistidae); a garoupa mosqueada Mycteroperca rubra (F: Serranidae) e o linguado comum Solea vulgaris (F: Soleidae). Os blastocistos foram isolados e rompidos; os pleurocistos gerados foram descritos morfologicamente e morfometricamente por microscopia eletrônica de luz e varredura. Além disso, foi realizado o alinhamento de sequências múltiplas e uma árvore filogenética foi construída seguindo a análise de máxima probabilidade das sequências de RNA ribossômico de 18s e 28s dos vermes recuperados. Trinta peixes foram infectados; a infecção foi registrada como blastocistos embutidos na carne do peixe. Três espécies diferentes de parasitas foram recuperadas e classificadas morfologicamente como Gymnorhynchus isuri, Pseudotobothrium dipsacum e Heteronybelinia estigmena. A posição taxonômica desses parasitas foi justificada pela análise molecular de seus rRNAs de 18 e 28 anos, que revelou altas porcentagens de homologia com espécies recuperadas do GenBank. Os números de acesso ON157059, ON139663 e ON139662 foram respectivamente atribuídos aos parasitas recuperados após sua deposição no GenBank. Os resultados obtidos a partir das análises moleculares confirmaram os registros morfológicos dos parasitas recuperados. Como as metacestodes são encontradas na musculatura dos espécimes de peixes infectados, é necessário remover estas áreas na comercialização dos peixes.

Characterization of the species of genus Physa on the basis of typological species concept from Central Punjab / Caracterização das espécies do gênero Physa com base no conceito tipológico de espécie do Punjab Central

Physids belong to Class Gastropoda; Phylum Mollusca have important position in food web and act as bio indicators, pests and intermediate host. Being resistant these are called cockroaches of malacology. Physid snails were collected from different water bodies of Faisalabad (Punjab) and were identified up to species using morphological markers. The morphometry of the specimens was carried out with the help of a digital Vernier caliper in millimeters (mm) using linear measurement of shell characters. Linear regression analysis of the AL/SW ratio vs AL and SL/SW ratiovs AL indicated that allometric growth exists only in Physa acuta when compared with P.gyrina and P. fontinalis. This study will lead to assess the status of the Physid species in Central Punjab. The Principal component analysis shows that the Component 1 (Shell Length) and component 2 (Shell Width) are the most prolific components and nearly 80 percent of the identification. The distance between P. acuta and P. fontinalis is 5.4699, P. acuta and P. gyrina is 7.6411, P. fontinalis and P. gyrina is 16.6080 showing that P. acuta resembles with P. fontinalis, and both these specimens donot resemble with P. gyrina. P.acuta is an invasive species and shows bioactivity making it a potent candidate for bioactive substances.

Os físidos pertencem à classe Gastropoda; o filo Mollusca possui importante posição na teia alimentar e atua como bioindicador, praga e hospedeiro intermediário. Por serem resistentes, são chamadas baratas de malacologia. Os caramujos físidos foram coletados em diferentes corpos d’água de Faisalabad (Punjab) e identificados até as espécies por meio de marcadores morfológicos. A morfometria dos corpos de prova foi realizada com auxílio de paquímetro digital Vernier em milímetros (mm) por meio de medida linear dos caracteres da casca. A análise de regressão linear da razão AL / SW vs. AL e razão SL / SW vs. AL indicou que o crescimento alométrico existe apenas em Physa acuta quando comparado com P. gyrina e P. fontinalis. Este estudo levará a avaliar a situação das espécies de físido no Punjab Central. A análise do componente principal mostra que o componente 1 (comprimento da casca) e o componente 2 (largura da casca) são os componentes mais prolíficos e quase 80% da identificação. A distância entre P. acuta e P. fontinalis é 5,4699, P. acuta e P. gyrina é 7,6411, P. fontinalis e P. gyrina é 16,6080, mostrando que P. acuta se assemelha a P. fontinalis, e ambos os espécimes não se parecem com P. gyrina. P. acuta é uma espécie invasora e apresenta bioatividade, tornando-se uma candidata potente para substâncias bioativas.