Lack of correlation between micro fungi species and chemical control method of Atta treated with toxic baits / Ausência de correlação entre espécies de microfungos e método de controle químico de Atta tratadas com iscas tóxicas

Atta sexdens rubropilosa (leaf-cutter ants) has a symbiotic association with a fungus and has a negative interaction with other fungi due to parasitism of the fungus cultivated by ants; also, there are several other fungi with no exact known role occurring in their cultivated fungus garden. In the present study, we use the ITS region (internal transcribed spacer) to identify fungi in colonies treated with toxic baits. Experiments using two toxic baits were carried out: 0.75g of sulfluramid [0.3%] and 0.75g fipronil [0.003%]. Samples of fungi were collected and cultured in Czapek medium for seven days to allow fungal growth and subsequent identification. Total DNA was isolated from 100-150 mg of mycelium using the CTAB method and using PCR, with the universal primers (ITS4 and ITS5), to amplify the ITS region. Sequencing was performed using the Sanger method. Sequences were subjected to BLAST, allowing the identification of nine different species of the orders Agaricales, Eurotiales, Hypocreales, Pleosporales, Saccharomycetales and Tremellales showing a variation in identity of 96-100%. Using "The Automatic Barcode Gap Discovery" analysis, nine groups were identified, corresponding to species described in NCBI. The K2P distances were used to generate a tree using Neighbour-joining, demonstrating that the species were grouped according to phylogenetic groups. We concluded that leaf-cutter ant colonies exhibited a wide variety of fungi and this study suggested that there is no correlation between the species of fungi isolated with the control method used on the ant nest.

Atta sexdens rubropilosa (cortadeira de folha) possui associação simbiótica com fungos e interação negativa com outros fungos devido ao parasitismo do fungo cultivado pelas formigas. Quando colônias da formiga cortadeira de folhas são submetidas ao tratamento com iscas tóxicas, diversas espécies de fungos surgem dentro da colônia, podendo contribuir com a morte ou sobrevivência da colônia. Para entender os relacionamentos ecológicos em colônias de formigas, a identificação de espécie de fungos se torna muito importante e, o uso de DNA barcoding tem sido um método rápido e eficiente para identificação de espécies usando métodos moleculares. No presente trabalho, usamos a região ITS (internal transcribed spacer) para identificar fungos em colônias tratadas com iscas tóxicas. Dois experimentos com iscas tóxicas foram aplicados: 0.75g de Fipronil [0.003%] e 0.75g de Sulfluramid [0.3%]. As amostras, contendo os possíveis fungos, foram coletadas e cultivadas em meio Czaped durante sete dias para o crescimento do fungo e posterior identificação. O DNA total foi isolado de 100-150mg de micélio usando o método CTAB, usado para amplificar a região ITS por PCR empregando primers universais (ITS5 e ITS4). O sequenciamento foi realizado utilizando o método de Sanger. As sequências foram submetidas ao BLAST, permitindo identificar nove diferentes espécies das ordens Agaricales, Eurotiales, Hypocreales, Pleosporales, Saccharomycetales e Tremellales, mostrando variação 96-100% de identidade. Empregando a análise "The Automatic Barcode Gap Discovery", identificou-se nove grupos, correspondendo as espécies descritas no NCBI. As distâncias K2P foram usadas para gerar uma árvore usando Neighbour-Joining, apresentando que as espécies foram agrupadas de acordo com as filogenias dos grupos. Conclui-se que as colônias de formigas cortadeira de folhas apresentam grande diversidade de fungos e que DNA barcoding é eficiente para identificação destes.

Lack of correlation between micro fungi species and chemical control method of Atta treated with toxic baits / Ausência de correlação entre espécies de microfungos e método de controle químico de Atta tratadas com iscas tóxicas

Atta sexdens rubropilosa (leaf-cutter ants) has a symbiotic association with a fungus and has a negative interaction with other fungi due to parasitism of the fungus cultivated by ants; also, there are several other fungi with no exact known role occurring in their cultivated fungus garden. In the present study, we use the ITS region (internal transcribed spacer) to identify fungi in colonies treated with toxic baits. Experiments using two toxic baits were carried out: 0.75g of sulfluramid [0.3%] and 0.75g fipronil [0.003%]. Samples of fungi were collected and cultured in Czapek medium for seven days to allow fungal growth and subsequent identification. Total DNA was isolated from 100-150 mg of mycelium using the CTAB method and using PCR, with the universal primers (ITS4 and ITS5), to amplify the ITS region. Sequencing was performed using the Sanger method. Sequences were subjected to BLAST, allowing the identification of nine different species of the orders Agaricales, Eurotiales, Hypocreales, Pleosporales, Saccharomycetales and Tremellales showing a variation in identity of 96-100%. Using "The Automatic Barcode Gap Discovery" analysis, nine groups were identified, corresponding to species described in NCBI. The K2P distances were used to generate a tree using Neighbour-joining, demonstrating that the species were grouped according to phylogenetic groups. We concluded that leaf-cutter ant colonies exhibited a wide variety of fungi and this study suggested that there is no correlation between the species of fungi isolated with the control method used on the ant nest.(AU)

Atta sexdens rubropilosa (cortadeira de folha) possui associação simbiótica com fungos e interação negativa com outros fungos devido ao parasitismo do fungo cultivado pelas formigas. Quando colônias da formiga cortadeira de folhas são submetidas ao tratamento com iscas tóxicas, diversas espécies de fungos surgem dentro da colônia, podendo contribuir com a morte ou sobrevivência da colônia. Para entender os relacionamentos ecológicos em colônias de formigas, a identificação de espécie de fungos se torna muito importante e, o uso de DNA barcoding tem sido um método rápido e eficiente para identificação de espécies usando métodos moleculares. No presente trabalho, usamos a região ITS (internal transcribed spacer) para identificar fungos em colônias tratadas com iscas tóxicas. Dois experimentos com iscas tóxicas foram aplicados: 0.75g de Fipronil [0.003%] e 0.75g de Sulfluramid [0.3%]. As amostras, contendo os possíveis fungos, foram coletadas e cultivadas em meio Czaped durante sete dias para o crescimento do fungo e posterior identificação. O DNA total foi isolado de 100-150mg de micélio usando o método CTAB, usado para amplificar a região ITS por PCR empregando primers universais (ITS5 e ITS4). O sequenciamento foi realizado utilizando o método de Sanger. As sequências foram submetidas ao BLAST, permitindo identificar nove diferentes espécies das ordens Agaricales, Eurotiales, Hypocreales, Pleosporales, Saccharomycetales e Tremellales, mostrando variação 96-100% de identidade. Empregando a análise "The Automatic Barcode Gap Discovery", identificou-se nove grupos, correspondendo as espécies descritas no NCBI. As distâncias K2P foram usadas para gerar uma árvore usando Neighbour-Joining, apresentando que as espécies foram agrupadas de acordo com as filogenias dos grupos. Conclui-se que as colônias de formigas cortadeira de folhas apresentam grande diversidade de fungos e que DNA barcoding é eficiente para identificação destes.(AU)

Antioxidant capacity of several Iranian, wild and cultivated strains of the button mushroom

The white button mushroom, Agaricus bisporus, is the most commonly grown mushroom in Iran; however, there is a significant shortage of research on its antioxidant activity and other medicinal properties. The aim of this study was to evaluate antioxidant capacity of the methanolic extracts from four cultivated strains and four Internal Transcribed Spacer (ITS)-identified, Iranian wild isolates of A. bisporus. Evaluations were made for total phenols, flavonoids and anthocyanins, and 2, 2-diphenyl-1-picrylhydrazyl (DPPH) scavenging activity. Overall, results showed that all the wild isolates exhibited significantly lower DPPH-derived EC₅₀, compared to the cultivated strains (p < 0.05). A relatively high relationship was observed between total phenols and flavonoids or anthocyanins (r² > 0.60). However, these constituents could not statistically differentiate the group of wild samples from the cultivated ones, and there was low correlation with the DPPH-derived EC₅₀s (r² < 0.40). In conclusion, comparisons showed that wild isolate 4 and cultivated strains A15 and H1 had higher antioxidant capacity than the others (p < 0.05). This result identifies these mushrooms as good candidates for further investigation..(AU)

Thermotolerant and mesophylic fungi from sugarcane bagasse and their prospection for biomass-degrading enzyme production

Nineteen fungi and seven yeast strains were isolated from sugarcane bagasse piles from an alcohol plant located at Brazilian Cerrado and identified up to species level on the basis of the gene sequencing of 5.8S-ITS and 26S ribosomal DNA regions. Four species were identified: Kluyveromyces marxianus, Aspergillus niger, Aspergillus sydowii and Aspergillus fumigatus, and the isolates were screened for the production of key enzymes in the saccharification of lignocellulosic material. Among them, three strains were selected as good producers of hemicellulolitic enzymes: A. niger (SBCM3), A. sydowii (SBCM7) and A. fumigatus (SBC4). The best β-xylosidase producer was A. niger SBCM3 strain. This crude enzyme presented optimal activity at pH 3.5 and 55 °C (141 U/g). For β-glucosidase and xylanase the best producer was A. fumigatus SBC4 strain, whose enzymes presented maximum activity at 60 °C and pH 3.5 (54 U/g) and 4.0 (573 U/g), respectively. All these crude enzymes presented stability around pH 3.0–8.0 and up to 60 °C, which can be very useful in industrial processes that work at high temperatures and low pHs. These enzymes also exhibited moderate tolerance to ethanol and the sugars glucose and xylose. These similar characteristics among these fungal crude enzymes suggest that they can be used synergistically in cocktails in future studies of biomass conversion with potential application in several biotechnological sectors..(AU)