Storage and Distribution of Organic Carbon and Nutrients in Acidic Soils Developed on Sulfidic Sediments: The Roles of Reactive Iron and Macropores.

In a boreal acidic sulfate-rich subsoil (pH 3-4) developing on sulfidic and organic-rich sediments over the past 70 years, extensive brownish-to-yellowish layers have formed on macropores. Our data reveal that these layers ("macropore surfaces") are strongly enriched in 1 M HCl-extractable reactive iron (2-7% dry weight), largely bound to schwertmannite and 2-line ferrihydrite. These reactive iron phases trap large pools of labile organic matter (OM) and HCl-extractable phosphorus, possibly derived from the cultivated layer. Within soil aggregates, the OM is of a different nature from that on the macropore surfaces but similar to that in the underlying sulfidic sediments (C-horizon). This provides evidence that the sedimentary OM in the bulk subsoil has been largely preserved without significant decomposition and/or fractionation, likely due to physiochemical stabilization by the reactive iron phases that also existed abundantly within the aggregates. These findings not only highlight the important yet underappreciated roles of iron oxyhydroxysulfates in OM/nutrient storage and distribution in acidic sulfate-rich and other similar environments but also suggest that boreal acidic sulfate-rich subsoils and other similar soil systems (existing widely on coastal plains worldwide and being increasingly formed in thawing permafrost) may act as global sinks for OM and nutrients in the short run.

A Combined X-ray Absorption and Mössbauer Spectroscopy Study on Fe Valence and Secondary Mineralogy in Granitoid Fracture Networks: Implications for Geological Disposal of Spent Nuclear Fuels.

Underground repository in crystalline bedrock is a widely accepted solution for long-term disposal of spent nuclear fuels. During future deglaciations, meltwater will intrude via bedrock fractures to the depths of future repositories where O2 left in the meltwater could corrode metal canisters and enhance the migration of redox-sensitive radionuclides. Since glacial meltwater is poor in reduced phases, the quantity and (bio)accessibility of minerogenic Fe(II) in bedrock fractures determine to what extent O2 in future meltwater can be consumed. Here, we determined Fe valence and mineralogy in secondary mineral assemblages sampled throughout the upper kilometer of fractured crystalline bedrock at two sites on the Baltic Shield, using X-ray absorption and Mössbauer spectroscopic techniques that were found to deliver matching results. The data point to extensive O2-consuming capacity of the bedrock fractures, because Fe(II)-rich phyllosilicates were abundant and secondary pyrite was dispersed deep into the bedrock with no overall increase in Fe(II) concentrations and Fe(II)/Fe(III) proportions with depth. The results imply that repeated Pleistocene deglaciations did not cause a measurable decrease in the Fe(II) pool. In surficial fractures, largely opened during glacial unloading, ferrihydrite and illite have formed abundantly via oxidative transformation of Fe(II)-rich phyllosilicates and recently exposed primary biotite/hornblende.

Incorporation of Metals into Calcite in a Deep Anoxic Granite Aquifer.

Understanding metal scavenging by calcite in deep aquifers in granite is of importance for deciphering and modeling hydrochemical fluctuations and water-rock interaction in the upper crust and for retention mechanisms associated with underground repositories for toxic wastes. Metal scavenging into calcite has generally been established in the laboratory or in natural environments that cannot be unreservedly applied to conditions in deep crystalline rocks, an environment of broad interest for nuclear waste repositories. Here, we report a microanalytical study of calcite precipitated over a period of 17 years from anoxic, low-temperature (14 °C), neutral (pH: 7.4-7.7), and brackish (Cl: 1700-7100 mg/L) groundwater flowing in fractures at >400 m depth in granite rock. This enabled assessment of the trace metal uptake by calcite under these deep-seated conditions. Aquatic speciation modeling was carried out to assess influence of metal complexation on the partitioning into calcite. The resulting environment-specific partition coefficients were for several divalent ions in line with values obtained in controlled laboratory experiments, whereas for several other ions they differed substantially. High absolute uptake of rare earth elements and U(IV) suggests that coprecipitation into calcite can be an important sink for these metals and analogousactinides in the vicinity of geological repositories.

Iron­sulfur geochemistry and acidity retention in hydrologically active macropores of boreal acid sulfate soils: Effects of mitigation suspensions of fine-grained calcite and peat.

Acid sulfate soils discharge large amounts of sulfuric acid along with toxic metals, deteriorating water quality and ecosystem health of recipient waterbodies. There is thus an urgent need to develop cost-effective and sustainable measures to mitigate the negative effects of these soils. In this study, we flushed aseptically-prepared MQ water (reference) or mitigation suspensions containing calcite, peat or a combination of both through 15-cm-thick soil cores from an acid sulfate soil field in western Finland, and investigated the geochemistry of Fe and S on the surfaces of macropores and in the solid columnar blocks (interiors) of the soil columns. The macropore surfaces of all soil columns were strongly enriched in total and HCl-extractable Fe and S relative to the interiors, owing to the existence of abundant Fe oxyhydroxysulfates (schwertmannite and partly jarosite) as yellow-to-brownish surface-coatings. The dissolution/hydrolysis of Fe oxyhydroxysulfates (predominantly jarosite) on the macropore surfaces of the reference columns, although being constantly flushed, effectively buffered the permeates at pH close to 4. These results suggest that Fe oxyhydroxysulfates accumulated on the macropore surfaces of boreal acid sulfate soils can act as long-lasting acidification sources. The treatments with mitigation suspensions led to a (near-)complete conversion of jarosite to Fe hydroxides, causing a substantial loss of S. In contrast, we did not observe any recognizable evidence indicating transformation of schwertmannite. However, sulfate sorbed by this mineral might be partially lost through anion-exchange processes during the treatments with calcite. No Fe sulfides were found in the peat-treated columns. Since Fe sulfides can support renewed acidification events, the moderate mineralogical changes induced by peat are desirable. In addition, peat materials can act as toxic-metal scavengers. Thus, the peat materials used here, which is relatively cheap in the boreal zone, is ideal for remediating boreal acid sulfate soils and other similar jarosite-bearing soils.

A nationwide acid sulfate soil study - A rapid and cost-efficient approach for characterizing large-scale features.

Acid sulfate soils are sulfide-rich soils that pose a notable environmental risk as their strong acidity and low pH mobilizes metals from soil minerals leading to both acidification and metal contamination of the surrounding environment. In this study a rapid and cost-efficient approach was developed to resolve the main distribution patterns and geochemical features of acid sulfate soils throughout coastal plains stretching for some 2000 km in eastern, southern, and western Sweden. Of the investigated 126 field sites, 47 % had acid sulfate soils including 33 % active, 12 % potential, and 2 % pseudo acid sulfate soils. There were large regional variations in the extent of acid sulfate soils, with overall much higher proportions of these soils along the eastern coastal plains facing the Baltic Sea than the western coastal plains facing the Kattegatt/Skagerrak (Atlantic Ocean). The sulfur concentrations of the soil's parent material, consisting of reduced near-pH neutral sediments, were correlated inversely both with the minimum pH of the soils in situ (rS = -0.65) and the pH after incubation (oxidation) of the reduced sediments (rS = -0.77). This indicated the importance of sulfide levels in terms of both present and potential future acidification. Hence, the higher proportion of acid sulfate soils in the east was largely the result of higher sulfur concentrations in this part of the country. The study showed that the approach was successful in identifying large-scale spatial patterns and geochemical characteristics of importance for environmental assessments related to these environmentally unfriendly soils.

Effect of tunnel excavation on source and mixing of groundwater in a coastal granitoidic fracture network.

The aim of this study was to assess how the excavation of the Äspö Hard Rock Laboratory tunnel has impacted on sources and mixing of groundwater in fractured crystalline (granitoidic) bedrock. The tunnel is 3600 m long and extends to a depth of 460 m at a coastal site in Boreal Europe. The study builds on a unique data set consisting of 1117 observations on chloride and δ(18)O of groundwater collected from a total of 356 packed-off fractures between 1987 and 2011. On the basis of the values of these two variables in selected source waters, a classification system was developed to relate the groundwater observations to source and postinfiltration mixing phenomena. The results show that the groundwater has multiple sources and a complex history of transport and mixing, and is composed of at least glacial water, marine water, recent meteoric water, and an old saline water. The tunnel excavation has had a large impact on flow, sources, and mixing of the groundwater. Important phenomena include upflow of deep-lying saline water, extensive intrusion of current Baltic Sea water, and substantial temporal variability of chloride and δ(18)O in many fractures.

Geochemistry of multiple sclerosis in Finland.

Multiple sclerosis (MS) affects some 3 million people around the world and the prevalence is increasing. The MS incidence increases with distance from the equator forming a north-to-south gradient. The cause of this gradient and the cause of MS in general are largely unknown. Sulphide-bearing marine and lake sediments, when exposed to oxygen after drainage, form sulphuric acid resulting in the development of acid sulphate soils. From these soils major neurotoxic metals such as iron, aluminum and manganese and trace metals such as nickel, copper and cadmium are released into the surrounding environment. As these soils are largely used for farming, obvious routes to human metal exposure exist. Here we compare the distribution of acid sulphate soils in Finland to the geographic localisation of MS cases using data from a national acid sulphate soil mapping project and historical MS distribution data. Finland has among the highest MS prevalences in the world and several independent nationwide surveys have shown the highest prevalence in western Finland, stable over time. Acid sulphate soil distribution colocalizes with MS, both on a regional (nationwide) scale and local (proximity to rivers) scale. A toxicokinetic LADME model for MS pathogenesis is presented. We propose that neurotoxic metals leaching from acid sulphate soils contribute to the clustering of MS in Finland.

Dredging and deposition of metal sulfide rich river sediments results in rapid conversion to acid sulfate soil materials.

Sediments along the Baltic Sea coast can contain considerable amounts of metal sulfides that if dredged and the spoils deposited such that they are exposed to air, can release high concentrations of acid and toxic metals into recipient water bodies. Two river estuaries in western Finland were dredged from 2013 to 2018 and the dredge spoils were deposited on land previously covered with agricultural limestone to buffer the pH and mitigate acid and metal release. In this study, the geochemistry and 16S rRNA gene amplicon based bacterial communities were investigated over time to explore whether the application of lime prevented a conversion of the dredge spoils into acid producing and metal releasing soil. The pH of the dredge spoils decreased with time indicating metal sulfide oxidation and resulted in elevated sulfate concentrations along with a concomitant release of metals. However, calculations indicated only approximately 5% of the added lime had been dissolved. The bacterial communities decreased in diversity with the lowering of the pH as taxa most similar to extremely acidophilic sulfur, and in some cases iron, oxidizing Acidithiobacillus species became the dominant characterized genus in the deposited dredge spoils as the oxidation front moved deeper. In addition, other taxa characterized as involved in oxidation of iron or sulfur were identified including Gallionella, Sulfuricurvum, and Sulfurimonas. These data suggest there was a rapid conversion of the dredge spoils to severely acidic soil similar to actual acid sulfate soil and that the lime placed on the land prior to deposition of the spoils, and later ploughed into the dry dredge spoils, was insufficient to halt this process. Hence, future dredging and deposition of dredge spoils containing metal sulfides should not only take into account the amount of lime used for buffering but also its grain size and mixing into the soil.

The response of metal mobilization and redistribution to reoxygenation in Baltic Sea anoxic sediments.

To bring life back to anoxic coastal and sea basins, reoxygenation of anoxic/hypoxic zones has been proposed. This research focuses on the metals released during the oxidization of sediments from two locations in the anoxic Eastern Gotland Basin under a laboratory-scale study. Triplicate experimental cores and reference cores were collected from the North and South Eastern Gotland Basins. The oxygenation of the water column took place over a 96-hour experiment in a dark and 5 °C environment. In 12 and 24 hour intervals, the surface waters were exchanged and, over time, analyzed for pH, electroconductivity (EC), total organic carbon (TOC), soluble metal concentrations, and the top samples (0-10 cm) were analyzed with 3-step (E1: water-soluble, E2: exchangeable, and E3: organic-bound) sequential chemical extraction (SCE). Results show stable pH and decreasing EC in the column waters. The EC indicates that metals are released in the initial phases (12 h) of reoxygenation for both sites. Arsenic, Ba, Co, Mn, Rb, U, K, Sr, and Mo are released into the water column during the 96 hour experiment, and based on the calculations for the entire East Gotland Basin, would mean 8, 50, 0.55, 734, 53, 27, 347,178, 3468, and 156 µg L-1 are released, respectively. Elements Mn, Mo, U, and As are released in higher concentrations during the experiment than previously measured in the Eastern Gotland Basin, which provides vital information for future proposed remediation and natural geochemical processes with their known environmental impacts. The SCE results show that redox-sensitive metals (Mn, U, and Mo) are released in the highest concentrations into the solution. The relationship between the highest released metals (beside redox-sensitive) into solution over the oxygenation and their initial abundant phase is noticed, where the smallest released concentrations belong to K < Rb < Sr in E2, and As

Connectivity of Fennoscandian Shield terrestrial deep biosphere microbiomes with surface communities.

The deep biosphere is an energy constrained ecosystem yet fosters diverse microbial communities that are key in biogeochemical cycling. Whether microbial communities in deep biosphere groundwaters are shaped by infiltration of allochthonous surface microorganisms or the evolution of autochthonous species remains unresolved. In this study, 16S rRNA gene amplicon analyses showed that few groups of surface microbes infiltrated deep biosphere groundwaters at the Äspö Hard Rock Laboratory, Sweden, but that such populations constituted up to 49% of the microbial abundance. The dominant persisting phyla included Patescibacteria, Proteobacteria, and Epsilonbacteraeota. Despite the hydrological connection of the Baltic Sea with the studied groundwaters, infiltrating microbes predominantly originated from deep soil groundwater. Most deep biosphere groundwater populations lacked surface representatives, suggesting that they have evolved from ancient autochthonous populations. We propose that deep biosphere groundwater communities in the Fennoscandian Shield consist of selected infiltrated and indigenous populations adapted to the prevailing conditions.

Baltic Sea sediments record anthropogenic loads of Cd, Pb, and Zn.

The unsustainable settlement and high industrialization around the catchment of the Baltic Sea has left records of anthropogenic heavy metal contamination in Baltic Sea sediments. Here, we show that sediments record post-industrial and anthropogenic loads of Cd, Zn, and Pb over a large spatial scale in the Baltic Sea. We also demonstrate that there is a control on the accumulation of these metals in relation to oxic/anoxic conditions of bottom waters. The total concentrations of Cd, Zn, and Pb were obtained with the near-total digestion method in thirteen cores collected from the Bothnian Bay, the Bothnian Sea, and the west and central Baltic Proper. The lowest average concentrations of Cd, Zn, and Pb were observed in Bothnian Bay (0.4, 125, 40.2 mg kg-1 DW, respectively). In contrast, the highest concentrations were observed in the west Baltic Proper (5.5, 435, and 56.6 mg kg-1 DW, respectively). The results indicate an increasing trend for Cd, Zn, and Pb from the early nineteenth century until the 1970s, followed by a decrease until 2000-2008. However, surface sediments still have concentrations above the pre-industrial values suggested by the Swedish EPA (Cd is 0.2, Zn is 85, and Pb is 31 mg kg-1 DW). The results also show that the pre-industrial Cd, Zn, and Pb concentrations obtained from 3 cores with ages < 1500 B.C. were 1.8, 1.7, and 1.2 times higher, respectively, than the pre-industrial values suggested by the Swedish EPA. To conclude, accumulations of metals in the Baltic Sea are governed by anthropogenic load and the redox conditions of the environment. The significance of correct environmental governance (measures) can be illustrated with the reduction in the pollution of Pb, Zn, and Cd within the Baltic Sea since the 1980s.

In situ Rb-Sr dating of slickenfibres in deep crystalline basement faults.

Establishing temporal constraints of faulting is of importance for tectonic and seismicity reconstructions and predictions. Conventional fault dating techniques commonly use bulk samples of syn-kinematic illite and other K-bearing minerals in fault gouges, which results in mixed ages of repeatedly reactivated faults as well as grain-size dependent age variations. Here we present a new approach to resolve fault reactivation histories by applying high-spatial resolution Rb-Sr dating to fine-grained mineral slickenfibres in faults occurring in Paleoproterozoic crystalline rocks. Slickenfibre illite and/or K-feldspar together with co-genetic calcite and/or albite were targeted with 50 µm laser ablation triple quadrupole inductively coupled plasma mass spectrometry analyses (LA-ICP-MS/MS). The ages obtained disclose slickenfibre growth at several occasions spanning over 1 billion years, from at least 1527 Ma to 349 ± 9 Ma. The timing of these growth phases and the associated structural orientation information of the kinematic indicators on the fracture surfaces are linked to far-field tectonic events, including the Caledonian orogeny. Our approach links faulting to individual regional deformation events by minimizing age mixing through micro-scale analysis of individual grains and narrow crystal zones in common fault mineral assemblages.

Geochemical controls on dispersion of U and Th in Quaternary deposits, stream water, and aquatic plants in an area with a granite pluton.

The weathering of U and/or Th rich granite plutons, which occurs worldwide, may serve as a potentially important, but as yet poorly defined source for U and Th in (sub-)surface environments. Here, we assessed the impact of an outcrop of such granite (5 km in diameter) and its erosional products on the distribution of U and Th in four nemo-boreal catchments. The results showed that (i) the pluton was enriched in both U and Th; and (ii) secondary U and Th phases were accumulated by peat/gyttja and in other Quaternary deposits with high contents of organic matter. Movement of the ice sheet during the latest glaciation led to dispersal of U- and Th-rich materials eroded from the pluton, resulting in a progressive increase in dissolved U and Th concentrations, as well as U concentrations in aquatic plants with increasing proximity to the pluton. The accumulation of U in the aquatic plants growing upon the pluton (100-365 mg kg-1, dry ash weight) shows that this rock represents a long-term risk for adjacent ecosystems. Dissolved pools of U and Th were correlated with those of dissolved organic matter (DOM) and were predicted to largely occur as organic complexes. This demonstrates the importance of DOM in the transport of U and Th in the catchments. Large fractions of Ca2UO2(CO3)30(aq) were modeled to occur in the stream with highest pH and alkalinity and thus, explain the strongly elevated U concentrations and fluxes in this particular stream. In future climate scenarios, boreal catchments will experience intensified runoff and warmer temperature that favor the production of hydrologically accessible DOM and alkalinity. Therefore, the results obtained from this study have implications for predicting the distribution and transport of Th and U in boreal catchments, especially those associated with U and/or Th rich granite plutons.

Comparison of boreal acid sulfate soil microbial communities in oxidative and reductive environments.

Due to land uplift after the last ice age, previously stable Baltic Sea sulfidic sediments are becoming dry land. When these sediments are drained, the sulfide minerals are exposed to air and can release large amounts of metals and acid into the environment. This can cause severe ecological damage such as fish kills in rivers feeding the northern Baltic Sea. In this study, five sites were investigated for the occurrence of acid sulfate soils and their geochemistry and microbiology was identified. The pH and soil chemistry identified three of the areas as having classical acid sulfate soil characteristics and culture independent identification of 16S rRNA genes identified populations related to acidophilic bacteria capable of catalyzing sulfidic mineral dissolution, including species likely adapted to low temperature. These results were compared to an acid sulfate soil area that had been flooded for ten years and showed that the previously oxidized sulfidic materials had an increased pH compared to the unremediated oxidized layers. In addition, the microbiology of the flooded soil had changed such that alkalinity producing ferric and sulfate reducing reactions had likely occurred. This suggested that flooding of acid sulfate soils mitigates their environmental impact.

Timing and origin of natural gas accumulation in the Siljan impact structure, Sweden.

Fractured rocks of impact craters may be suitable hosts for deep microbial communities on Earth and potentially other terrestrial planets, yet direct evidence remains elusive. Here, we present a study of the largest crater of Europe, the Devonian Siljan structure, showing that impact structures can be important unexplored hosts for long-term deep microbial activity. Secondary carbonate minerals dated to 80 ± 5 to 22 ± 3 million years, and thus postdating the impact by more than 300 million years, have isotopic signatures revealing both microbial methanogenesis and anaerobic oxidation of methane in the bedrock. Hydrocarbons mobilized from matured shale source rocks were utilized by subsurface microorganisms, leading to accumulation of microbial methane mixed with a thermogenic and possibly a minor abiotic gas fraction beneath a sedimentary cap rock at the crater rim. These new insights into crater hosted gas accumulation and microbial activity have implications for understanding the astrobiological consequences of impacts.

Estuarine behaviour of metal loads leached from coastal lowland acid sulphate soils.

The estuarine behaviour of the metal load leaching from acid sulphate (AS) soils was studied in a selected river system (the Vörå River), in western Finland. Large amounts of metals were transported with the river and deposited within the estuary, causing highly elevated metal concentrations in both the sediment traps and in the underlying bottom sediments. Among the metals, there was a diverging deposition pattern where Al, Cu, La and U demonstrated a strong association with organic matter and were deposited within approximately 4 km from the river mouth. In contrast, the deposition of Co, Mn, Ni and Zn occurred when pH reached circumneutral conditions further out in the estuary. Yet other metals were not abundantly leached from the AS soils and thus not elevated in the river and estuary (Fe, Ti, Cr, V). Five separate chemical extractions indicated the geochemical speciation of the metals.

Depth and Dissolved Organic Carbon Shape Microbial Communities in Surface Influenced but Not Ancient Saline Terrestrial Aquifers.

The continental deep biosphere is suggested to contain a substantial fraction of the earth's total biomass and microorganisms inhabiting this environment likely have a substantial impact on biogeochemical cycles. However, the deep microbial community is still largely unknown and can be influenced by parameters such as temperature, pressure, water residence times, and chemistry of the waters. In this study, 21 boreholes representing a range of deep continental groundwaters from the Äspö Hard Rock Laboratory were subjected to high-throughput 16S rRNA gene sequencing to characterize how the different water types influence the microbial communities. Geochemical parameters showed the stability of the waters and allowed their classification into three groups. These were (i) waters influenced by infiltration from the Baltic Sea with a "modern marine (MM)" signature, (ii) a "thoroughly mixed (TM)" water containing groundwaters of several origins, and (iii) deep "old saline (OS)" waters. Decreasing microbial cell numbers positively correlated with depth. In addition, there was a stronger positive correlation between increased cell numbers and dissolved organic carbon for the MM compared to the OS waters. This supported that the MM waters depend on organic carbon infiltration from the Baltic Sea while the ancient saline waters were fed by "geogases" such as carbon dioxide and hydrogen. The 16S rRNA gene relative abundance of the studied groundwaters revealed different microbial community compositions. Interestingly, the TM water showed the highest dissimilarity compared to the other two water types, potentially due to the several contrasting water types contributing to this groundwater. The main identified microbial phyla in the groundwaters were Gammaproteobacteria, unclassified sequences, Campylobacterota (formerly Epsilonproteobacteria), Patescibacteria, Deltaproteobacteria, and Alphaproteobacteria. Many of these taxa are suggested to mediate ferric iron and nitrate reduction, especially in the MM waters. This indicated that nitrate reduction may be a neglected but important process in the deep continental biosphere. In addition to the high number of unclassified sequences, almost 50% of the identified phyla were archaeal or bacterial candidate phyla. The percentage of unknown and candidate phyla increased with depth, pointing to the importance and necessity of further studies to characterize deep biosphere microbial populations.

Unprecedented 34 S-enrichment of pyrite formed following microbial sulfate reduction in fractured crystalline rocks.

In the deep biosphere, microbial sulfate reduction (MSR) is exploited for energy. Here, we show that, in fractured continental crystalline bedrock in three areas in Sweden, this process produced sulfide that reacted with iron to form pyrite extremely enriched in 34 S relative to 32 S. As documented by secondary ion mass spectrometry (SIMS) microanalyses, the δ34 Spyrite values are up to +132‰V-CDT and with a total range of 186‰. The lightest δ34 Spyrite values (-54‰) suggest very large fractionation during MSR from an initial sulfate with δ34 S values (δ34 Ssulfate,0 ) of +14 to +28‰. Fractionation of this magnitude requires a slow MSR rate, a feature we attribute to nutrient and electron donor shortage as well as initial sulfate abundance. The superheavy δ34 Spyrite values were produced by Rayleigh fractionation effects in a diminishing sulfate pool. Large volumes of pyrite with superheavy values (+120 ± 15‰) within single fracture intercepts in the boreholes, associated heavy average values up to +75‰ and heavy minimum δ34 Spyrite values, suggest isolation of significant amounts of isotopically light sulfide in other parts of the fracture system. Large fracture-specific δ34 Spyrite variability and overall average δ34 Spyrite values (+11 to +16‰) lower than the anticipated δ34 Ssulfate,0 support this hypothesis. The superheavy pyrite found locally in the borehole intercepts thus represents a late stage in a much larger fracture system undergoing Rayleigh fractionation. Microscale Rb-Sr dating and U/Th-He dating of cogenetic minerals reveal that most pyrite formed in the early Paleozoic era, but crystal overgrowths may be significantly younger. The δ13 C values in cogenetic calcite suggest that the superheavy δ34 Spyrite values are related to organotrophic MSR, in contrast to findings from marine sediments where superheavy pyrite has been proposed to be linked to anaerobic oxidation of methane. The findings provide new insights into MSR-related S-isotope systematics, particularly regarding formation of large fractions of 34 S-rich pyrite.

Potential for hydrogen-oxidizing chemolithoautotrophic and diazotrophic populations to initiate biofilm formation in oligotrophic, deep terrestrial subsurface waters.

BACKGROUND: Deep terrestrial biosphere waters are separated from the light-driven surface by the time required to percolate to the subsurface. Despite biofilms being the dominant form of microbial life in many natural environments, they have received little attention in the oligotrophic and anaerobic waters found in deep bedrock fractures. This study is the first to use community DNA sequencing to describe biofilm formation under in situ conditions in the deep terrestrial biosphere. RESULTS: In this study, flow cells were attached to boreholes containing either "modern marine" or "old saline" waters of different origin and degree of isolation from the light-driven surface of the earth. Using 16S rRNA gene sequencing, we showed that planktonic and attached populations were dissimilar while gene frequencies in the metagenomes suggested that hydrogen-fed, carbon dioxide- and nitrogen-fixing populations were responsible for biofilm formation across the two aquifers. Metagenome analyses further suggested that only a subset of the populations were able to attach and produce an extracellular polysaccharide matrix. Initial biofilm formation is thus likely to be mediated by a few bacterial populations which were similar to Epsilonproteobacteria, Deltaproteobacteria, Betaproteobacteria, Verrucomicrobia, and unclassified bacteria. CONCLUSIONS: Populations potentially capable of attaching to a surface and to produce extracellular polysaccharide matrix for attachment were identified in the terrestrial deep biosphere. Our results suggest that the biofilm populations were taxonomically distinct from the planktonic community and were enriched in populations with a chemolithoautotrophic and diazotrophic metabolism coupling hydrogen oxidation to energy conservation under oligotrophic conditions.