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1.
Phys Rev Lett ; 125(17): 177002, 2020 Oct 23.
Artigo em Inglês | MEDLINE | ID: mdl-33156658

RESUMO

We investigate low-temperature electronic properties of the nondimeric organic superconductor ß^{''}-(ET)_{4}[(H_{3}O)Ga(C_{2}O_{4})_{3}]PhNO_{2}. By examining ultrasonic properties, charge disproportionation (CD) without magnetic field dependence is detected below T_{CD}∼8 K just above the superconducting critical temperature T_{c}∼6 K. From quantum oscillations in high fields, we find variation in the Fermi surface and mass enhancement induced by the CD. Heat capacity studies elucidate that the superconducting gap function is fully gapped in the Fermi surface, but anisotropic with fourfold symmetry. We point out that the pairing mechanism of the superconductivity is possibly dominated by charge fluctuations.

2.
Hum Reprod ; 34(9): 1762-1769, 2019 09 29.
Artigo em Inglês | MEDLINE | ID: mdl-31398259

RESUMO

STUDY QUESTION: Do monosomy rescue (MR) and trisomy rescue (TR) in preimplantation human embryos affect other developmental processes, such as X-chromosome inactivation (XCI)? SUMMARY ANSWER: Aneuploid rescue precedes XCI and increases the incidence of XCI skewness by reducing the size of the embryonic progenitor cell pools. WHAT IS KNOWN ALREADY: More than half of preimplantation human embryos harbor aneuploid cells, some of which can be spontaneously corrected through MR or TR. XCI in females is an indispensable process, which is predicted to start at the early-blastocyst phase. STUDY DESIGN, SIZE, DURATION: We examined the frequency of XCI skewness in young females who carried full uniparental disomy (UPD) resulting from MR or TR/gamete complementation (GC). The results were statistically analyzed using a theoretical model in which XCI involves various numbers of embryonic progenitor cells. PARTICIPANTS/MATERIALS, SETTING, METHODS: We studied 39 children and young adults ascertained by imprinting disorders. XCI ratios were determined by DNA methylation analysis of a polymorphic locus in the androgen receptor gene. We used Bayesian approach to assess the probability of the occurrence of extreme XCI skewness in the MR and TR/GC groups using a theoretical model of 1-12 cell pools. MAIN RESULTS AND THE ROLE OF CHANCE: A total of 12 of 39 individuals (31%) showed skewed XCI. Extreme skewness was observed in 3 of 15 MR cases (20%) and 1 of 24 TR/GC cases (4.2%). Statistical analysis indicated that XCI in the MR group was likely to have occurred when the blastocyst contained three or four euploid embryonic progenitor cells. The estimated size of the embryonic progenitor cell pools was approximately one-third or one-fourth of the predicted size of normal embryos. The TR/GC group likely had a larger pool size at the onset of XCI, although the results remained inconclusive. LIMITATIONS, REASONS FOR CAUTION: This is an observational study and needs to be validated by experimental analyses. WIDER IMPLICATIONS OF THE FINDINGS: This study provides evidence that the onset of XCI is determined by an intrinsic clock, irrespectively of the number of embryonic progenitor cells. Our findings can also be applied to individuals without UPD or imprinting disorders. This study provides a clue to understand chromosomal and cellular dynamics in the first few days of human development, their effects on XCI skewing and the possible implications for the expression of X-linked diseases in females. STUDY FUNDING/COMPETING INTEREST(S): This study was supported by the Grants-in-aid for Scientific Research on Innovative Areas (17H06428) and for Scientific Research (B) (17H03616) from Japan Society for the Promotion of Science (JSPS), and grants from Japan Agency for Medical Research and Development (AMED) (18ek0109266h0002 and 18ek0109278h0002), National Center for Child Health and Development and Takeda Science Foundation. The authors declare no conflict of interest. TRIAL REGISTRATION NUMBER: Not applicable.


Assuntos
Aneuploidia , Tamanho Celular , Cromossomos Humanos X/genética , Células-Tronco Embrionárias/patologia , Inativação do Cromossomo X/genética , Adolescente , Teorema de Bayes , Blastocisto , Criança , Pré-Escolar , Estudos de Coortes , Desenvolvimento Embrionário/genética , Feminino , Impressão Genômica , Humanos , Incidência , Lactente , Gravidez , Diagnóstico Pré-Implantação/métodos , Adulto Jovem
3.
Inorg Chem ; 56(17): 10452-10457, 2017 Sep 05.
Artigo em Inglês | MEDLINE | ID: mdl-28809550

RESUMO

Magnetization measurements under pressure reveal that the external hydrostatic pressure significantly increases in the ferrimagnetic transition temperature, Tc, for A2Mn[Mn(CN)6] (A = K, Rb, Cs). In the case of monoclinic A = K and Rb, dTc/dp values are 21.2 and 14.6 K GPa-1, respectively, and Tc increases by 53 and 39%, respectively, from ambient pressure to 1.0 GPa. The cubic A = Cs compound also shows a monotonous increase with an initial rate of 4.22 K GPa-1 and about 11.4 K GPa-1 above 0.6 GPa, and an overall Tc increase by 26% at 1.0 GPa. The increase in Tc is attributed to deformation of the structure such that the MnII-N≡C angle decreases with increasing pressure. The smaller the alkali cation, the greater the decrease in the MnII-N≡C angle induced by pressure and the larger the increase of dTc/dp. This is in accordance with the ambient-pressure structures for A2Mn[Mn(CN)6] (A = K, Rb, Cs), which have decreasing MnII-N≡C angles that correlate to the observed increasing Tcs as K > Rb > Cs. The large increase in Tc for the A = K compound is the highest class among several cyano-bridged metal complexes. The tuning of the transition temperature by such a weak pressure may lead to additional applications such as switching devices.

4.
Science ; 290(5496): 1578-81, 2000 Nov 24.
Artigo em Inglês | MEDLINE | ID: mdl-11090356

RESUMO

To study whether cloning resets the epigenetic differences between the two X chromosomes of a somatic female nucleus, we monitored X inactivation in cloned mouse embryos. Both X chromosomes were active during cleavage of cloned embryos, followed by random X inactivation in the embryo proper. In the trophectoderm (TE), X inactivation was nonrandom with the inactivated X of the somatic donor being chosen for inactivation. When female embryonic stem cells with two active X chromosomes were used as donors, random X inactivation was seen in the TE and embryo. These results demonstrate that epigenetic marks can be removed and reestablished on either X chromosome during cloning. Our results also suggest that the epigenetic marks imposed on the X chromosomes during gametogenesis, responsible for normal imprinted X inactivation in the TE, are functionally equivalent to the marks imposed on the chromosomes during somatic X inactivation.


Assuntos
Clonagem de Organismos , Mecanismo Genético de Compensação de Dose , Embrião de Mamíferos/metabolismo , Cromossomo X/genética , Alelos , Animais , Diferenciação Celular , Embrião de Mamíferos/citologia , Desenvolvimento Embrionário e Fetal , Feminino , Inativação Gênica , Genes Reporter , Impressão Genômica , Proteínas de Fluorescência Verde , Proteínas Luminescentes/genética , Masculino , Camundongos , Muridae , Técnicas de Transferência Nuclear , Oócitos , Placenta/metabolismo , Reação em Cadeia da Polimerase Via Transcriptase Reversa , Transplante de Células-Tronco , Células-Tronco/metabolismo , Transgenes , Cromossomo X/metabolismo
5.
Science ; 293(5527): 95-7, 2001 Jul 06.
Artigo em Inglês | MEDLINE | ID: mdl-11441181

RESUMO

Cloning by nuclear transfer (NT) is an inefficient process in which most clones die before birth and survivors often display growth abnormalities. In an effort to correlate gene expression with survival and fetal overgrowth, we have examined imprinted gene expression in both mice cloned by nuclear transfer and in the embryonic stem (ES) cell donor populations from which they were derived. The epigenetic state of the ES cell genome was found to be extremely unstable. Similarly, variation in imprinted gene expression was observed in most cloned mice, even in those derived from ES cells of the same subclone. Many of the animals survived to adulthood despite widespread gene dysregulation, indicating that mammalian development may be rather tolerant to epigenetic aberrations of the genome. These data imply that even apparently normal cloned animals may have subtle abnormalities in gene expression.


Assuntos
Núcleo Celular/genética , Clonagem de Organismos , Embrião de Mamíferos/citologia , Regulação da Expressão Gênica no Desenvolvimento , Impressão Genômica/genética , Células-Tronco/citologia , Células-Tronco/metabolismo , Animais , Animais Recém-Nascidos , Peso ao Nascer , Cesárea , Clonagem de Organismos/métodos , Anormalidades Congênitas/genética , Metilação de DNA , Perda do Embrião/genética , Transferência Embrionária , Embrião de Mamíferos/metabolismo , Feminino , Morte Fetal/genética , Inativação Gênica , Camundongos , Oócitos/metabolismo , Placenta/metabolismo , Placentação , Poliploidia , Gravidez , RNA Mensageiro/genética , RNA Mensageiro/metabolismo , Respiração , Taxa de Sobrevida
6.
Biochim Biophys Acta ; 684(2): 172-8, 1982 Jan 22.
Artigo em Inglês | MEDLINE | ID: mdl-7055560

RESUMO

The effects of the local anesthetic dibucaine on the membrane headgroup conformations of phosphatidylcholine and phosphatidylethanolamine were determined using 2H- and 31P-NMR. The size of the deuterium quadrupole splittings of the two methylene segments of the choline and ethanolamine groups changed dramatically and the 31-phosphorus chemical shift anisotropy of the phosphatidylcholine headgroup decreased by about 7 ppm in the presence of local anesthetic. The quadrupole splittings of the 3-glycerol and choline methyl segments were relatively insensitive to the addition of dibucaine. The headgroup data for dibucaine addition paralleled similar data for the addition of various cations. These NMR results agree with the previous observation that these drugs displace calcium from phospholipids. The effects of this local anesthetic on these headgroups were distinctly different from the changes induced by cholesterol, heat and the general anesthetic chloroform.


Assuntos
Dibucaína , Fosfatidilcolinas , Fosfatidiletanolaminas , Cátions Bivalentes , Espectroscopia de Ressonância Magnética , Modelos Biológicos , Conformação Molecular , Relação Estrutura-Atividade
7.
Biochim Biophys Acta ; 1369(2): 240-6, 1998 Mar 02.
Artigo em Inglês | MEDLINE | ID: mdl-9518634

RESUMO

Temperature dependence of the spin-lattice relaxation time of proton in the rotating frame (T1rho(H)) was examined for the membranes of the intact PM2 phage, its host bacterial cells, and the phospholipids extracted from the cells. The relevant motions of the phospholipid molecules in all lipid membranes were found in the fast-motional regime (tauc < 1.7 x 10(-6) s) in the temperature range from 0 to 34 degrees C. The motions responsible for the relaxation in the intact biomembranes are more suppressed than those of the extracted phospholipid bilayers, suggesting that the lipid-protein interactions induce slow motions of the phospholipids in the membrane. Especially, the membrane of the intact PM2 phage showed a cooperative change in the motional state, being consistent with the reported change in the phosphorus chemical shift anisotropies of DNA and phospholipids of the phage particle.


Assuntos
Membrana Celular/química , Corticoviridae/química , Bacilos e Cocos Aeróbios Gram-Negativos/virologia , Espectroscopia de Ressonância Magnética , Prótons
8.
Biochim Biophys Acta ; 854(2): 213-8, 1986 Jan 29.
Artigo em Inglês | MEDLINE | ID: mdl-3942726

RESUMO

A Raman band assigned to the 'totally' symmetric stretching vibration of the choline C-N bonds is relatively strong and sensitive to the conformation of the choline backbone (Akutsu, H. (1981) Biochemistry 20, 7359-7366). By monitoring this Raman band, the influence of Eu3+, La3+, Ca2+ and a local anesthetic, dibucaine, on the conformation of the choline group was examined for the bilayers of dipalmitoylphosphatidylcholine and those of deuterated one at the choline methyl group (-N(C2H3)3). NMR lanthanide-shift studies proposed that the interaction with metal ions induces a conformational change from the gauche to the trans form in the O-C-C-N+ backbone of the choline group. However, present Raman work clearly showed that neither metal ions nor anesthetics induce such a conformational change. Therefore, a structural change in the polar group detected by 2H-NMR on addition of metal ions should not include a significant conformational change in the choline group as well. Deuterated phosphatidylcholine used here was proved to be more suitable for the direct detection of the amount of the trans conformation by Raman spectroscopy than the nondeuterated one. The spectra of the deuterated compound in the gel and liquid-crystalline states confirmed that the trans conformation of the choline group does not appear at all in both states.


Assuntos
Anestésicos Locais/farmacologia , Colina , Bicamadas Lipídicas , Metais/farmacologia , Fosfatidilcolinas , Cálcio/farmacologia , Fenômenos Químicos , Físico-Química , Dibucaína/farmacologia , Európio/farmacologia , Lantânio/farmacologia , Espectroscopia de Ressonância Magnética , Análise Espectral Raman
9.
Biochim Biophys Acta ; 944(3): 321-8, 1988 Oct 20.
Artigo em Inglês | MEDLINE | ID: mdl-3052589

RESUMO

A glycerol-requiring auxotroph was isolated from mutagenized Escherichia coli K-12 UFAts cells. This auxotroph was used for the specific deuteration of E. coli phospholipids. The cells were grown under high osmotic pressure (in the presence of 2.0% KCl). The membrane had a highly saturated fatty acid composition (76% phosphatidylethanolamine, 20% cardiolipin and 4% phosphatidylglycerol). The deuterium magnetic resonance spectra of coarse liposomes of the extracted phospholipids with perdeuterated glycerol incorporated into them were measured. To obtain well characterized information, phospholipid mixtures reconstituted from the deuterated and nondeuterated components at the same ratios as in the case of the total extract were used. On the analysis of the spectra, the following conclusions were drawn. (1) The whole polar region of cardiolipin is dynamically symmetric and quite rigid in the presence of phosphatidylethanolamine. (2) Although the quadrupole splittings of the deuterons at the C-2 and C-3 positions of the glycerol backbone were similar to each other, those at the C-1 position for phosphatidylethanolamine and cardiolipin are different, even in the same bilayer. (3) Furthermore, each C-1 deuteron of phosphatidylethanolamine gave rise to a doublet, suggesting the presence of two backbone conformations, between which there is slow exchange. (4) The polar head group of phosphatidylethanolamine interacts with cardiolipin and phosphatidylglycerol in different ways, which could be responsible for the different osmotic properties of the vesicles composed of them.


Assuntos
Escherichia coli/análise , Lipídeos de Membrana/análise , Concentração Osmolar , Fosfatidiletanolaminas/análise , Cardiolipinas/análise , Glicerol/análise , Espectroscopia de Ressonância Magnética , Conformação Molecular
10.
Biochim Biophys Acta ; 1238(1): 42-8, 1995 Aug 23.
Artigo em Inglês | MEDLINE | ID: mdl-7654749

RESUMO

The intermolecular interactions and microscopic miscibility of the lipid bilayers of single component and binary mixtures with high content of saturated fatty acids were investigated by 2H- and 31P-NMR for phosphatidylcholine (PC), phosphatidylethanolamine (PE), phosphatidylglycerol (PG) and cardiolipin (CL). Their glycerol backbones were selectively deuterated by biosynthesis and chemical synthesis. Deuterium quadrupole splittings and phosphorus chemical shift anisotropies provided the consistent information for the molecular miscibility of each phospholipids. PE was found to be completely miscible with PG and CL. Since deuterium quadrupole splittings and phosphorus chemical shift anisotropy are identical for two components in the mixed bilayer, the dynamic structure from the glycerol backbone to phosphate group should be uniform in the binary mixture of these phospholipids. In contrast to PE, PC was not fully miscible with PG and CL at molecular resolution. The dynamic structure from the glycerol backbone to phosphate group is different for two components in the binary mixed bilayers. In the case of the mixed bilayers of PC and PE, both phospholipids are microscopically immiscible with each other. Thus, while PE, PG and CL can adapt to a new situation to form a uniform dynamic structure in mixed bilayers, PC has no ability for adaptation. The molecular miscibility in lipid bilayers was shown to depend on the molecular species and the nature of the molecular interactions. The biological significance of this result was discussed.


Assuntos
Bicamadas Lipídicas/química , Fosfatidilcolinas/química , Fosfatidiletanolaminas/química , Espectroscopia de Ressonância Magnética
11.
Biochim Biophys Acta ; 466(3): 393-401, 1977 May 02.
Artigo em Inglês | MEDLINE | ID: mdl-322716

RESUMO

Total phospholipids were extracted from cells of temperature sensitive unsaturated fatty acid auxotrophs of Escherichia coli (K-12 UFAts) grown at 28degrees C (PL28), and at 42degrees C in the presence of 2% KCl as an osmotic stabilizer (PL42 (KCl)). From the analysis of fatty acids, it was shown that the content of unsaturated fatty acids of PL42 (KCl) is only 9% of the total fatty acids, while that of PL28 is 54%. The thermal phase transitions of the bilayers prepared from the phospholipid fractions were studied by proton magnetic resonance. The line widths of the methylene signals and the sums of the methylene and methyl signal intensities were plotted against reciprocal values of absolute temperature 1/T or temperature itself. From the plots phase transitions were detected at about 19degrees C for PL28 and at 43degrees C for PL42 (KCl). In spite of its complex composition of fatty acids a highly cooperative transition was observed in the case of PL42 (KCl). It was also suggested that the phospholipids bilayers in the biomembranes of this strain at the growth temperature (42 degrees C) are in the state where the gel and liquid crystalline phases coexist.


Assuntos
Escherichia coli/metabolismo , Ácidos Graxos Insaturados/metabolismo , Fosfolipídeos , Membrana Celular , Ácidos Graxos/análise , Espectroscopia de Ressonância Magnética , Lipídeos de Membrana/análise , Microscopia Eletrônica , Temperatura
12.
Biochim Biophys Acta ; 821(2): 277-85, 1985 Dec 05.
Artigo em Inglês | MEDLINE | ID: mdl-3904831

RESUMO

A temperature sensitive auxotroph of Escherichia coli K-12 requiring unsaturated fatty acids can grow normally at 28 degrees C, but requires an osmotic stabilizer such as a high amount of salt or sugar in the medium for the growth at 42 degrees C. Namely, the apparent osmotic stability of the cells at 28 degrees C and 42 degrees C is quite different. The osmotic properties of liposomes of the phospholipids extracted from these cells were investigated. The osmotically induced volume change of the multilamellar liposomes was examined by the turbidimetric method. The liposomes prepared from cells grown at 28 degrees C can swell and shrink under a wide range of hypo-and hypertonic conditions. However, those from cells grown at 42 degrees C could not swell under hypotonic conditions. These results exhibit a good correlation between the apparent osmotic stability of E. coli cells and the osmotic properties of the liposomes prepared from the extracted total phospholipids. To clarify the role of each phospholipid component, the osmotic properties of the liposomes reconstituted from the purified phospholipid species were further investigated. The results clearly showed that phosphatidylglycerol is the key factor that stabilizes the membranes of E. coli phospholipids against osmotic pressure.


Assuntos
Escherichia coli/metabolismo , Lipossomos/metabolismo , Fosfatidilgliceróis/metabolismo , Fosfolipídeos/metabolismo , Ácidos Graxos/análise , Matemática , Pressão Osmótica , Temperatura , Fatores de Tempo
13.
Biochim Biophys Acta ; 1140(2): 144-56, 1992 Dec 07.
Artigo em Inglês | MEDLINE | ID: mdl-1332780

RESUMO

The reduction of the tetraheme cytochrome c3 (from Desulfovibrio vulgaris, strains Miyazaki F and Hildenbourough) by flavin semiquinone and reduced methyl viologen follows a monophasic kinetic profile, even though the four hemes do not have equivalent reduction potentials. Rate constants for reduction of the individual hemes are obtained subsequent to incrementally reducing the cytochrome by phototitration. The dependence of each rate constant on the reduction potential difference between the heme and the reductant can be described by outer sphere electron transfer theroy. Thus, the very low reduction potentials of the cytochrome c3 hemes compensate for the very large solvent accessibility of the hemes. The relative rate constants for electron transfer to the four hemes of cytochrome c3 are consistent with the assignments of reduction potential to hemes previously made by Park et al. (Park, J.-S., Kano, K., Niki, S. and Akutsu, H. (1991) FEBS Lett. 285, 149-151) using NMR techniques. The ionic strength dependence of the observed rate constant for reduction by the methyl viologen radical cation indicates that ionic strength substantially alters the structure and/or the heme reduction potentials of the cytochrome. This result is confirmed by reduction with a neutral flavin species (5-deazariboflavin semiquinone) in which the reactivity of the highest potential heme decreases and the reactivity of the lowest potential heme increases at high (500 mM) ionic strength, and by the sensitivity of heme methyl resonances to ionic strength as observed by 1H-NMR. These unusual ionic strength-dependent effects may be due to a combination of structural changes in the cytochrome and alterations of the electrostatic fields at elevated ionic strengths.


Assuntos
Grupo dos Citocromos c/química , Desulfovibrio vulgaris/enzimologia , Grupo dos Citocromos c/isolamento & purificação , Ácido Edético , Heme/química , Concentração de Íons de Hidrogênio , Cinética , Oxirredução
14.
Biochim Biophys Acta ; 598(3): 437-46, 1980 Jun 06.
Artigo em Inglês | MEDLINE | ID: mdl-6992868

RESUMO

1. An unsaturated fatty acid auxotroph of Escherichia coli accumulated a high content of saturated fatty acids in its membrane when it was cultured under osmotically stabilized conditions. The physicochemical properties of the phospholipid extracts and of the membrane fraction from the cells were investigated by means of proton magnetic resonance, infrared spectroscopy and differential scanning calorimetry. 2. Physicochemical studies indicate that the phospholipid bilayers in the membranes exhibit at least two phase transitions, a minor one at approx. 19 degrees C and a major one at approx. 43 degrees C. Between the two temperatures, gel and liquid crystalline domains co-exist. Moreover, even in the gel state, phospholipids seem to segregated into domains containing different proportions of unsaturated fatty acids. 3. The Arrhenius plot of beta-galactoside transport rates is biphasic. The inflection point is at 22 degrees C. This means that the appearance of the fluid region in the bilayer at approx. 19 degrees C is important in the activation of membrane transport.


Assuntos
Membrana Celular/ultraestrutura , Escherichia coli/ultraestrutura , Lipídeos de Membrana/análise , Fosfolipídeos/análise , Transporte Biológico , Varredura Diferencial de Calorimetria , Membrana Celular/metabolismo , Escherichia coli/metabolismo , Ácidos Graxos Insaturados/metabolismo , Galactosídeos/metabolismo , Bicamadas Lipídicas , Espectroscopia de Ressonância Magnética , Espectrofotometria Infravermelho , Termodinâmica
15.
Biochim Biophys Acta ; 1436(3): 426-36, 1999 Jan 04.
Artigo em Inglês | MEDLINE | ID: mdl-9989273

RESUMO

The structures of two novel polar lipids (AGI and AI) of an aerobic hyperthermophilic archaeon, Aeropyrum pernix, were elucidated. AGI and AI were the only two major lipids and accounted for 91 mol% and 9 mol%, respectively, of total polar lipids of this organism. The core lipid of A. pernix total lipids consisted solely of 2,3-di-O-sesterterpanyl-sn-glycerol (C25,25-archaeol). The molecular weights of the free acid forms of AGI and AI were shown by FAB-mass spectrometry to be 1196 and 1034, respectively. AI was completely hydrolyzed by phosphatidylinositol-specific phospholipase C, while AGI was not hydrolyzed at all under the same condition for the hydrolysis of AI. The molar ratio of phosphate, myo-inositol, and glucose in AGI was 1.0:0.97:0.95. The positions of linkages between myo-inositol and glucose, and between myo-inositol and phosphate in AGI were determined by NMR analyses of intact AGI and glucosylinositol prepared from AGI. Finally, it was concluded that the structures of AGI and AI were 2,3-di-O-sesterterpanyl-sn-glycerol-1-phospho-1'-(2'-O-alpha-D-glu cosyl)- myo-inositol (C25,25-archaetidyl(glucosyl)inositol) and 2,3-di-O-sesterterpanyl-sn-glycerol-1-phospho-myo-inositol (C25,25-archaetidylinositol), respectively. This is the first example that a core lipid of whole polar lipids is composed of only one species C25,25-archaeol in one organism and that glucosylinositol is found in a polar lipid as a polar head group.


Assuntos
Crenarchaeota/química , Éteres Fosfolipídicos/isolamento & purificação , Crenarchaeota/classificação , Espectroscopia de Ressonância Magnética , Estrutura Molecular , Éteres Fosfolipídicos/química , Espectrometria de Massas de Bombardeamento Rápido de Átomos
16.
Biochim Biophys Acta ; 1293(1): 45-54, 1996 Mar 07.
Artigo em Inglês | MEDLINE | ID: mdl-8652627

RESUMO

The assignment of 1H-NMR signals of the heme methyl and propionate groups of cytochrome c3 of D. vulgaris Miyazaki F was performed. The heme assignment was revised for hemes 2 and 3 (sequential heme numbering). Namely, heme 4 is mainly reduced at first with hemes 1, 2 and 3 following it in this order. The p2H titration of heme methyl signals in four macroscopic oxidation states was performed in the p2H range of 5.2 to 9.0. While the heme methyl resonances in the fully oxidized state showed just small changes with p2H, most resonances in the intermediate oxidation states revealed clear p2H dependence. In particular, the methyl resonances of heme 1 shifted significantly in the acidic region. Then, the chemical shifts of beta-CH2 (next to the carboxyl group) of all propionate groups in the fully oxidized state were observed at various p2H in the range of 4.5 to 9.0. Only the propionate group at C-13 (IUPAC-IUB nomenclature) of heme 1 showed a clear change in this p2H range, its titration curve being similar to those of the methyl resonances of heme 1 in the intermediate oxidation states. pKa of the propionate group was 5.95 +/- 0.05. Analysis of the microscopic formal redox potentials was carried out for the observations at p2H 5.2, 7.1 and 9.0. The redox potentials of heme 1 showed the most remarkable p2H dependence, resulting in the change of the order of the redox potentials of four hemes. A significant change was also found in the interacting potential between hemes 1 and 2. In the light of the p2H-titration experiments, the propionate at C-13 of heme 1 was identified as the most plausible ionizable group responsible for the p2H dependence of microscopic redox potentials of heme 1 in the acidic region.


Assuntos
Grupo dos Citocromos c/química , Desulfovibrio vulgaris/química , Heme/química , Grupo dos Citocromos c/metabolismo , Desulfovibrio vulgaris/metabolismo , Transporte de Elétrons , Heme/metabolismo , Concentração de Íons de Hidrogênio , Espectroscopia de Ressonância Magnética , Estrutura Molecular , Oxirredução , Propionatos/química , Prótons
17.
Biochim Biophys Acta ; 1351(1-2): 239-47, 1997 Mar 20.
Artigo em Inglês | MEDLINE | ID: mdl-9116039

RESUMO

A gene encoding rubredoxin from Desulfovibrio vulgaris (Miyazaki F) was cloned and overexpressed in Escherichia coli. A 1.1-kilobase pair DNA fragment, isolated from D. vulgaris (Miyazaki F) by double digestion with SmaI and SalI, contained two genes, the rubredoxin gene (rub) and the desulfoferrodoxin gene (rbo) which was situated upstream of rub. The deduced amino acid sequence of desulfoferrodoxin was homologous to those from other strains and Cys residues that are responsible to bind irons were also conserved. The expression system for rub was constructed under the control of the T7 promoter in E. coli. The purified protein was soluble and had a characteristic visible absorption spectrum. Inductively coupled plasma-atomic emission analysis and electron paramagnetic resonance analysis of the recombinant rubredoxin revealed the presence of an iron ion in a distorted tetrahedral geometry that was the same as native D. vulgaris rubredoxin. In vitro NADH reduction analysis indicated that recombinant rubredoxin was active, and its redox potential was determined as -5 mV.


Assuntos
Desulfovibrio vulgaris/genética , Genes Bacterianos , Rubredoxinas/genética , Sequência de Aminoácidos , Sequência de Bases , Clonagem Molecular , Espectroscopia de Ressonância de Spin Eletrônica , Escherichia coli/genética , Ferredoxinas/genética , Vetores Genéticos , Ferro/análise , Dados de Sequência Molecular , NADH NADPH Oxirredutases/metabolismo , Proteínas Recombinantes/biossíntese , Proteínas Recombinantes/isolamento & purificação , Mapeamento por Restrição , Rubredoxinas/biossíntese , Rubredoxinas/isolamento & purificação , Análise de Sequência de DNA , Homologia de Sequência de Aminoácidos , Espectrofotometria , Zinco/análise
18.
J Mol Biol ; 174(1): 221-9, 1984 Mar 25.
Artigo em Inglês | MEDLINE | ID: mdl-6716478

RESUMO

31P nuclear magnetic resonance (n.m.r.) of highly oriented NaDNA and LiDNA fibers was measured as a function of relative humidity over the range from 66% to 98%. The humidity dependence of the spectral patterns of NaDNA fibers shows that the A form has a single conformation while the B form has multiple conformations, and that interconversion between the A and B conformers in the transition region is slow compared to the n.m.r. time-scale (approximately 10(-5) s). Two major conformations of the B form of LiDNA are found to be stable at low relative humidity and they rapidly interchange at high relative humidities. The spectral patterns of immobilized LiDNA are compatible with the single-crystal structure of double-stranded oligo nucleic acids.


Assuntos
DNA , Umidade , Lítio , Espectroscopia de Ressonância Magnética , Conformação de Ácido Nucleico , Sódio
19.
AJNR Am J Neuroradiol ; 36(2): 317-22, 2015 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-25300986

RESUMO

BACKGROUND AND PURPOSE: High-resolution 3D MR cisternography techniques such as 3D T2WI-driven equilibrium radiofrequency reset pulse (DRIVE) are used preoperatively to assess neurovascular anatomy in patients with neurovascular compression syndrome, but contrast between vessels and cranial nerves at the point of neurovascular contact is limited. The postprocessing technique subtraction of 3D T2WI-driven equilibrium radiofrequency reset pulse from contrast-enhanced 3D T1WI (sDRICE) provides both high spatial resolution and excellent contrast in depicting the neurovascular contact. We evaluated the usefulness of sDRICE compared with 3D T2WI-DRIVE. MATERIALS AND METHODS: Twelve patients who underwent microvascular decompression for hemifacial spasm or trigeminal neuralgia were examined preoperatively with 3D T2WI-DRIVE and sDRICE. Two neuroradiologists retrospectively analyzed and scored lesion conspicuity, defined as the ease of discrimination between offending vessels and compressed nerves or the brain stem at the neurovascular contact. They also quantitatively analyzed the contrast and contrast-to-noise ratio at the neurovascular contact. RESULTS: The lesion conspicuity scores of sDRICE images were significantly higher than those of 3D T2WI-DRIVE for all 12 patients (P = .006) and the 6 cases of hemifacial spasm (P = .023) but were not significantly higher in the 6 trigeminal neuralgia cases alone (P = .102). For all 12 patients, the contrast-to-noise ratio between the offending vessels and the brain stem and between the vessels and nerves on sDRICE images was significantly higher than that on 3D T2WI-DRIVE (P = .003 and P = .007, respectively). Among these structures, the contrast values were also significantly higher on the sDRICE than on the 3D T2WI-DRIVE (P < .001) images. CONCLUSIONS: The postprocessing technique sDRICE is useful to evaluate neurovascular anatomy and to improve contrast and the contrast-to-noise ratio in patients with neurovascular compression syndrome.


Assuntos
Interpretação de Imagem Assistida por Computador/métodos , Imageamento Tridimensional/métodos , Síndromes de Compressão Nervosa/diagnóstico por imagem , Neuroimagem/métodos , Adulto , Idoso , Feminino , Espasmo Hemifacial/diagnóstico por imagem , Humanos , Angiografia por Ressonância Magnética/métodos , Masculino , Pessoa de Meia-Idade , Radiografia , Estudos Retrospectivos , Neuralgia do Trigêmeo/diagnóstico por imagem
20.
Protein Sci ; 9(2): 369-75, 2000 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-10716189

RESUMO

Mutant human lysozymes (Ile56Thr & Asp67His) have been reported to form amyloid deposits in the viscera. From the standpoint of understanding the mechanism of amyloid formation, we searched for conditions of amyloid formation in vitro using hen egg lysozyme, which has been extensively studied from a physicochemical standpoint. It was found that the circular dichroism spectra in the far-ultraviolet region of the hen egg lysozyme changed to those characteristic of a beta-structure from the native alpha-helix rich spectrum in 90% ethanol solution. When the concentration of protein was increased to 10 mg/mL, the protein solution formed a gel in the presence of 90% ethanol, and precipitated on further addition of 10 mM NaCl. The precipitates were examined by electron microscopy, their ability to bind Congo red, and X-ray diffraction to determine whether amyloid fibrils were formed in the precipitates. Electron micrographs displayed unbranched protofilament with a diameter of approximately 70 A. The peak point of the difference spectrum for the Congo red binding assay was 541 nm, which is characteristic of amyloid fibrils. The X-ray diffraction pattern showed a sharp and intense diffraction ring at 4.7 A, a reflection that arises from the interstrand spacing in beta-sheets. These results indicate that the precipitates of hen egg lysozyme are amyloid protofilament, and that the amyloid protofilament formation of hen egg lysozyme closely follows upon the destruction of the helical and tertiary structures.


Assuntos
Amiloide/química , Amiloide/metabolismo , Muramidase/química , Muramidase/metabolismo , Amiloide/ultraestrutura , Animais , Galinhas , Dicroísmo Circular , Etanol , Feminino , Humanos , Técnicas In Vitro , Espectroscopia de Ressonância Magnética , Microscopia Eletrônica , Muramidase/ultraestrutura , Estrutura Secundária de Proteína , Soluções , Difração de Raios X
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