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1.
J Water Health ; 21(12): 1747-1760, 2023 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-38153709

RESUMO

Small water supplies face similar problems worldwide, regardless of ownership or management type. Non-compliance with water quality regulations is more frequent in small supplies than in large ones, as are waterborne disease outbreaks. The new European Union Drinking Water Directive requires risk-based approach (RBA) to secure water safety as is recommended in the World Health Organization's Guidelines for drinking water quality through 'water safety plans'. This is already in regulation in the Nordic countries, although less used in small supplies. In this research, we explore the challenges, barriers and possible solutions to implementing RBA and improving compliance in small supplies. This was achieved by conducting and analysing interviews with 53 stakeholders from all eight Nordic countries to produce recommendations for action by the different implicated actors. Our findings suggest the centrality of governmental policy, including support for continuous training, provision of simple RBA guidelines and increasing cooperation in the water sector. The Nordic experience reflects global challenges with small water supplies and the trend towards systematic preventive management epitomized in the framework for drinking water safety advocated by the World Health Organization since 2004.


Assuntos
Água Potável , Qualidade da Água , Abastecimento de Água , Surtos de Doenças , União Europeia
2.
Environ Sci Technol ; 53(21): 12433-12441, 2019 Nov 05.
Artigo em Inglês | MEDLINE | ID: mdl-31593453

RESUMO

Copper is a cofactor of the ammonia monooxygenase, an essential enzyme for the activity of ammonia oxidizing prokaryotes (AOP). Copper dosing at less than 1 µg/L stimulated ammonium removal in the poorly nitrifying biological filters of three full-scale drinking water treatment plants. Upon copper dosing, the ammonium concentration in the effluent decreased from up to 0.18 to less than 0.01 mg NH4+-N/L. To investigate how copper dosing affected the filter microbial community, we applied amplicon sequencing and qPCR targeting key nitrifying groups, including complete ammonia oxidizing (comammox) Nitrospira. Copper dosing increased the abundance of different nitrifiers. Multiple Nitrosomonas variants (betaproteobacterial ammonia oxidizers), which initially collectively represented 1% or less of the total community, increased almost 10-fold. Comammox Nitrospira were abundant and increased too, but their relative abundance within the AOP decreased because of Nitrosomonas proliferation. No other consistent change in the filter communities was detected, as well as no adverse effect of copper on the filters functionality. Our results show that copper dosing in three independent treatment plants was associated with consistent growth of AOP and that efficient nitrification was achieved through the joint contribution of comammox Nitrospira and an increasing fraction of betaproteobacterial ammonia oxidizers.


Assuntos
Água Potável , Nitrificação , Amônia , Proliferação de Células , Cobre , Nitritos , Nitrosomonas , Oxirredução
3.
Appl Microbiol Biotechnol ; 103(2): 1007-1019, 2019 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-30474728

RESUMO

Drinking water supply is in many parts of the world based on groundwater. Groundwater often contains methane, which can be oxidized by methanotrophs upon aeration. Sand from rapid sand filters fed with methane-rich groundwater can remove some pesticides (Hedegaard and Albrechtsen in Water Res 48:71-81, 2014). We enriched methanotrophs from filter sand and investigated whether they could drive the degradation of various pesticides. To enrich for methanotrophs, we designed and operated four laboratory-scale, continuously methane-fed column reactors, inoculated with filter sand and one control column fed with tap water. When enrichments were obtained, methane was continuously supplied to three reactors, while the fourth was starved for methane for 1 week, and the reactors were spiked with ten pesticides at groundwater-relevant concentrations (2.1-6.6 µg/L). Removal for most pesticides was not detected at the investigated contact time (1.37 min). However, the degradation of phenoxy acids was observed in the methanotrophic column reactor starved for methane, while it was not detected in the control column indicating the importance of methanotrophs. Phenoxy acid removal, using dichlorprop as a model compound, was further investigated in batch experiments with methanotrophic biomass collected from the enrichment reactors. Phenoxy acid removal (expressed per gram of matrix sand) was substantially improved in the methanotrophic enrichment compared to parent filter sand. The presence of methane did not clearly impact dichlorprop removal but did impact mineralization. We suggest that other heterotrophs are responsible for the first step in dichlorprop degradation, while the subsequent steps including ring-hydroxylation are driven by methanotrophs.


Assuntos
Ácido 2,4-Diclorofenoxiacético/análogos & derivados , Filtração , Água Subterrânea/microbiologia , Metano/metabolismo , Microbiota , Praguicidas/metabolismo , Purificação da Água/métodos , Ácido 2,4-Diclorofenoxiacético/metabolismo , Reatores Biológicos/microbiologia , Biotransformação , Água Subterrânea/química , Poluentes Químicos da Água/metabolismo
4.
Environ Microbiol ; 19(7): 2785-2793, 2017 07.
Artigo em Inglês | MEDLINE | ID: mdl-28488787

RESUMO

Community assembly is a central topic in microbial ecology: how do assembly processes interact and what is the relative contribution of stochasticity and determinism? Here, we exposed replicate flow-through biofilm systems, fed with nitrite-supplemented tap water, to continuous immigration from a source community, present in the tap water, to determine the extent of selection and neutral processes in newly assembled biofilm communities at both the community and the functional guild (of nitrite-oxidizing bacteria, NOB) levels. The community composition of biofilms assembled under low and high nitrite loading was described after 40 days of complete nitrite removal. The total community assembly, as well as the NOB guild assembly were largely governed by a combination of deterministic and stochastic processes. Furthermore, we observed deterministic enrichment of certain types of NOB in the biofilms. Specifically, elevated nitrite loading selected for a single Nitrotoga representative, while lower nitrite conditions selected for a number of Nitrospira. Therefore, even when focusing on ecologically coherent ensembles, assembly is the result of complex stochastic and deterministic processes that can only be interrogated by observing multiple assemblies under controlled conditions.


Assuntos
Biofilmes/crescimento & desenvolvimento , Gallionellaceae/metabolismo , Nitritos/metabolismo , Reatores Biológicos/microbiologia , Água Potável/microbiologia , Gallionellaceae/classificação , Gallionellaceae/crescimento & desenvolvimento , Oxirredução , Microbiologia da Água
5.
Environ Sci Technol ; 49(12): 7073-81, 2015 Jun 16.
Artigo em Inglês | MEDLINE | ID: mdl-26000605

RESUMO

Biodegradation is one of the most favored and sustainable means of removing organic pollutants from contaminated aquifers but the major steering factors are still surprisingly poorly understood. Growing evidence questions some of the established concepts for control of biodegradation. Here, we critically discuss classical concepts such as the thermodynamic redox zonation, or the use of steady state transport scenarios for assessing biodegradation rates. Furthermore, we discuss if the absence of specific degrader populations can explain poor biodegradation. We propose updated perspectives on the controls of biodegradation in contaminant plumes. These include the plume fringe concept, transport limitations, and transient conditions as currently underestimated processes affecting biodegradation.


Assuntos
Bactérias/metabolismo , Água Subterrânea/microbiologia , Poluentes Químicos da Água/análise , Biodegradação Ambiental , Elétrons , Oxirredução
6.
Appl Environ Microbiol ; 80(22): 7010-20, 2014 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-25192987

RESUMO

A mineral coating develops on the filter grain surface when groundwater is treated via rapid sand filtration in drinking water production. The coating changes the physical and chemical properties of the filter material, but little is known about its effect on the activity, colonization, diversity, and abundance of microbiota. This study reveals that a mineral coating can positively affect the colonization and activity of microbial communities in rapid sand filters. To understand this effect, we investigated the abundance, spatial distribution, colonization, and diversity of all and of nitrifying prokaryotes in filter material with various degrees of mineral coating. We also examined the physical and chemical characteristics of the mineral coating. The amount of mineral coating correlated positively with the internal porosity, the packed bulk density, and the biologically available surface area of the filter material. The volumetric NH4 (+) removal rate also increased with the degree of mineral coating. Consistently, bacterial 16S rRNA and amoA abundances positively correlated with increased mineral coating levels. Microbial colonization could be visualized mainly within the outer periphery (60.6 ± 35.6 µm) of the mineral coating, which had a thickness of up to 600 ± 51 µm. Environmental scanning electron microscopic (E-SEM) observations suggested an extracellular polymeric substance-rich matrix and submicron-sized bacterial cells. Nitrifier diversity profiles were similar irrespective of the degree of mineral coating, as indicated by pyrosequencing analysis. Overall, our results demonstrate that mineral coating positively affects microbial colonization and activity in rapid sand filters, most likely due to increased volumetric cell abundances facilitated by the large surface area of internal mineral porosity accessible for microbial colonization.


Assuntos
Bactérias/metabolismo , Filtração/instrumentação , Água Subterrânea/química , Minerais/química , Dióxido de Silício/química , Poluentes Químicos da Água/metabolismo , Purificação da Água/instrumentação , Compostos de Amônio/química , Compostos de Amônio/metabolismo , Bactérias/genética , Bactérias/crescimento & desenvolvimento , Bactérias/isolamento & purificação , Biodegradação Ambiental , Filtração/métodos , Água Subterrânea/microbiologia , Porosidade , Poluentes Químicos da Água/química , Purificação da Água/métodos
7.
Appl Environ Microbiol ; 79(1): 367-75, 2013 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-23124226

RESUMO

Two 4-chloro-2-methylphenoxyacetic acid (MCPA)-degrading enrichment cultures selected from an aquifer on low (0.1 mg liter(-1)) or high (25 mg liter(-1)) MCPA concentrations were compared in terms of metabolic activity, community composition, population growth, and single cell physiology. Different community compositions and major shifts in community structure following exposure to different MCPA concentrations were observed using both 16S rRNA gene denaturing gradient gel electrophoresis fingerprinting and pyrosequencing. The communities also differed in their MCPA-mineralizing activities. The enrichments selected on low concentrations mineralized MCPA with shorter lag phases than those selected on high concentrations. Flow cytometry measurements revealed that mineralization led to cell growth. The presence of low-nucleic acid-content bacteria (LNA bacteria) was correlated with mineralization activity in cultures selected on low herbicide concentrations. This suggests that LNA bacteria may play a role in degradation of low herbicide concentrations in aquifers impacted by agriculture. This study shows that subpopulations of herbicide-degrading bacteria that are adapted to different pesticide concentrations can coexist in the same environment and that using a low herbicide concentration enables enrichment of apparently oligotrophic subpopulations.


Assuntos
Ácido 2-Metil-4-clorofenoxiacético/metabolismo , Bactérias/classificação , Bactérias/metabolismo , Biota , Água Subterrânea/microbiologia , Herbicidas/metabolismo , Bactérias/genética , Bactérias/crescimento & desenvolvimento , Eletroforese em Gel de Gradiente Desnaturante , Citometria de Fluxo , RNA Ribossômico 16S/genética
8.
J Water Health ; 11(3): 465-72, 2013 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-23981875

RESUMO

In order to identify the optimal pH range for chlorinated swimming pools, the formation of trihalomethanes, haloacetonitriles and trichloramine was investigated in the pH-range 6.5-7.5 in batch experiments. An artificial body fluid analogue was used to simulate bather load as the precursor for by-products. The chlorine-to-precursor ratio used in the batch experiments influenced the amounts of by-products formed, but regardless of the ratio the same trends in the effect of pH were observed. Trihalomethane formation was reduced by decreasing pH, but haloacetonitrile and trichloramine formation increased. To evaluate the significance of the increase and decrease of the investigated organic by-products at the different pH values, the genotoxicity was calculated based on literature values. The calculated genotoxicity was approximately at the same level in the pH range 6.8-7.5 and increased when pH was 6.7 or lower. An optimal pH range for by-products formation in swimming pools was identified at pH 7.0-7.2. In the wider pH range (pH 6.8-7.5), the effect on by-product formation was negligible. Swimming pools should never be maintained at lower pH than 6.8 since formation of both haloacetonitriles and trichloramine increase significantly below this value.


Assuntos
Halogenação , Piscinas , Poluentes Químicos da Água/análise , Acetonitrilas/química , Cloretos/química , Concentração de Íons de Hidrogênio , Testes de Mutagenicidade , Compostos de Nitrogênio/química , Trialometanos/química
9.
Water Res ; 229: 119480, 2023 Feb 01.
Artigo em Inglês | MEDLINE | ID: mdl-36528929

RESUMO

Polyethylene (PE) pipes are often the material of choice for water supply systems, thanks to their favorable properties, such as high strength-density ratio and corrosion resistance. However, previous studies have shown that organic compounds can migrate from PE pipes to the water. This study aimed to identify potential organic compounds migrating from high-density PE (HDPE) pipes used to distribute drinking water in Denmark, based on laboratory experiments and sampling in the distribution system using a two-tiered study design. In the first tier, migration of volatile and semi-volatile organic compounds (VOCs and semi-VOCs) from HDPE pipes were investigated over one, three, and nine days in laboratory experiments, performed according to modified standards for migration testing (EN 12,873-1). The analytical workflow consisted of solid-phase extraction (SPE) for 10,000 times enrichment and gas chromatography - mass spectrometry (GC-MS) analysis from the water phase after migration. A total of 133 compounds originating from the PE pipes were detected. Thirty-one compounds were detected by suspect screening (SS), while the remaining 102 compounds were detected by non-target screening (NTS) analysis. Among the detected compounds were also hindered amine stabilizers (HALS), flame retardant, and plasticizer tris(2-chloroethyl) phosphate. In the second tier, drinking water from a water distribution system in Copenhagen, Denmark, with a newly installed HDPE pipe was sampled and analyzed with GC-MS and liquid chromatography high-resolution mass spectrometry (LCHRMS). A total of 51 compounds were detected in the water, 12 of which were assigned to migration from HDPE. Surprisingly, HDPE antioxidants and their degradation products contributed only a relatively small percentage of the total measured compound intensities in the drinking water distribution system. Instead, a larger proportion of the compounds detected were assigned to rubber seals, used upstream in the water system from the abstraction site to delivery at the consumer tap. Seals are considered trifle in the larger picture of materials in contact with drinking water, however these results may cause a reconsideration of this position.


Assuntos
Água Potável , Compostos Orgânicos Voláteis , Poluentes Químicos da Água , Água Potável/química , Abastecimento de Água , Polietileno/análise , Borracha , Compostos Orgânicos Voláteis/análise , Poluentes Químicos da Água/análise
10.
BMC Microbiol ; 11: 254, 2011 Nov 21.
Artigo em Inglês | MEDLINE | ID: mdl-22103438

RESUMO

BACKGROUND: Culture and quantitative polymerase chain reaction (qPCR) assays for the detection of Legionella were compared on samples from a residential area before and after two interventions. A total of 84 samples were collected from shower hoses and taps as first flush samples and at constant temperature. Samples were grouped according to the origin of the sample, a) circulation water b) water from empty apartments c) water from shower hoses. The aims were to investigate the usefulness of qPCR compared to culture for monitoring remedial actions for elimination of Legionella bacteria and as a tool for risk assessment. RESULTS: In water collected from the apartments Legionella spp were detected by qPCR in the concentration range from LOQ to 9.6*105GU/L while L. pneumophila were detected in a range from LOQ to 6.8*105 GU/L. By culturing, the legionellae were detected in the range from below detection limit (> 10 CFU/L) to 1.6*106 CFU/L. In circulating water and in first flush water from shower hoses, culture and qPCR showed the same tendencies. The overall correlation between the bacteria number detected by culture and the two developed qPCR assays (L. spp and L. pneumophila) was relatively poor (r2 = 0.31 for culture and Legionella spp. assay, r2 = 0.20 for culture and L. pneumophila assay). CONCLUSION: Detection by qPCR was suitable for monitoring changes in the concentration of Legionella but the precise determination of bacteria is difficult. Risk assessment by qPCR only on samples without any background information regarding treatment, timing, etc is dubious. However, the rapid detection by qPCR of high concentrations of Legionella - especially Legionella pneumophila - is valuable as an indicator of risk, although it may be false positive compared to culture results. On the other hand, the detection of a low number of bacteria by qPCR is a strong indication for the absence of risk.


Assuntos
Legionella pneumophila/isolamento & purificação , Legionella/isolamento & purificação , Reação em Cadeia da Polimerase , Contagem de Colônia Microbiana , Monitoramento Ambiental/métodos , Legionella/genética , Legionella pneumophila/genética , Limite de Detecção , Reação em Cadeia da Polimerase/métodos , Medição de Risco/métodos
11.
J Environ Manage ; 92(1): 185-94, 2011 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-20888683

RESUMO

Urban water supplies are traditionally based on limited freshwater resources located outside the cities. However, a range of concepts and techniques to exploit alternative water resources has gained ground as water demands begin to exceed the freshwater available to cities. Based on 113 cases and 15 in-depth case studies, solutions used to increase water self-sufficiency in urban areas are analyzed. The main drivers for increased self-sufficiency were identified to be direct and indirect lack of water, constrained infrastructure, high quality water demands and commercial and institutional pressures. Case studies demonstrate increases in self-sufficiency ratios to as much as 80% with contributions from recycled water, seawater desalination and rainwater collection. The introduction of alternative water resources raises several challenges: energy requirements vary by more than a factor of ten amongst the alternative techniques, wastewater reclamation can lead to the appearance of trace contaminants in drinking water, and changes to the drinking water system can meet tough resistance from the public. Public water-supply managers aim to achieve a high level of reliability and stability. We conclude that despite the challenges, self-sufficiency concepts in combination with conventional water resources are already helping to reach this goal.


Assuntos
Cidades , Conservação dos Recursos Naturais , Abastecimento de Água , Água do Mar
12.
Water Res ; 203: 117439, 2021 Sep 15.
Artigo em Inglês | MEDLINE | ID: mdl-34399249

RESUMO

Drinking water softening is often implemented to increase consumer convenience e.g. by reducing lime scaling and soap use. Softening reduces hardness, but changes also the overall mineral composition of the water, depending on the technology. A broad spectrum of effects from softening has to be considered in relation to e.g. health and corrosion when selecting softening technology and design, otherwise adverse effects may be overlooked in the attempt to increase consumer convenience. We here provided a framework for evaluating softening technologies using water quality indicators for lime scaling, soap use, corrosion, human health, taste and removal of contaminants. None of the evaluated softening technologies scored positive on all the included water quality indicators. Precipitation technologies (lime/soda-ash softening and pellet softening) reduce the predicted copper and lead release, but negatively affect stainless steel corrosion expressed by the Larson Ratio. Pellet softening does not remove magnesium, which may limit the achievable softening depth, but maintains a protective effect against cardio-vascular diseases. Strong-acid cation exchange is not expected to affect the included corrosion indicators, whereas the effects from membrane separation (nanofiltration and reverse osmosis) and weak-acid cation exchange depend on the specific source water and process design. All the evaluated technologies reduce hardness, calcium carbonate precipitation potential (CCPP) and atopic eczema, but have potential adverse effects on dental carries (expressed by DMF-S). Our framework provides a better understanding of softening and can prepare water utility planners and managers for better decisions that balance the positive and adverse effects from drinking water softening.


Assuntos
Água Potável , Purificação da Água , Humanos , Indicadores de Qualidade em Assistência à Saúde , Tecnologia , Abrandamento da Água
13.
Int J Hyg Environ Health ; 230: 113627, 2020 09.
Artigo em Inglês | MEDLINE | ID: mdl-32956900

RESUMO

Reliable safe water supply is a pillar of society and a key to public health. The Nordic countries have an abundance of clean fresh water as a source for drinking water supplies. They have followed developments in safeguarding water, both the recommendations of the World Health Organization framework for safe drinking water and European legislation. Worldwide, including the Nordic countries, small water supplies are less compliant with water safety regulation. The forthcoming EU directive on drinking water require risk-based approaches and improved transparency on water quality. This research looks at the Nordic frameworks for safe water supply, with emphasis on risk-based approaches and smaller systems. We analyzed the legal frameworks for safe water, the structure of the water sector across the Nordic countries and explored how prepared these countries are to meet these requirements. Our findings show that, while legal requirements are mostly in place, delivery of information to the public needs to be improved. Most Nordic countries are in the process of implementing risk-based management in large and medium size water supplies, whereas small supplies are lagging. We conclude that a key to success is increased training and support for small supplies. We suggest wider adoption of the Nordic model of cooperation with benchmarking of safe water for all to transfer knowledge between the countries. This work provides insights into challenges and opportunities for the Nordic countries and provides insights relevant to countries worldwide in their effort towards realization of SDG Target 6.1.


Assuntos
Água Potável , Água Doce , Saúde Pública , Qualidade da Água , Abastecimento de Água
14.
Sci Total Environ ; 698: 134185, 2020 Jan 01.
Artigo em Inglês | MEDLINE | ID: mdl-31505354

RESUMO

Drinking water quality has been regulated in most European countries for nearly two decades by the drinking water directive 98/83/EC. The directive is now under revision with the goal of meeting stricter demands for safe water for all citizens, as safe water has been recognized as a human right by the United Nations. An important change to the directive is the implementation of a risk-based approach in all regulated water supplies. The European Union Framework Seventh Programme Aquavalens project has developed several new detection technologies for pathogens and indicators and tested them in water supplies in seven European countries. One of the tasks of the project was to evaluate the impact of these new techniques on water safety and on water safety management. Data were collected on risk factors to water safety for five large supplies in Denmark, Germany, Spain and the UK, and for fifteen small water supplies in Scotland, Portugal and Serbia, via a questionnaire aiming to ascertain risk factors and the stage of implementation of Water Safety Plans, and via site-specific surveys known as Sanitary Site Inspection. Samples were collected from the water supplies from all stages of water production to delivery. Pathogens were detected in around 23% of the 470 samples tested. Fecal contamination was high in raw water and even in treated water at the small supplies. Old infrastructure was considered a challenge at all the water supplies. The results showed that some of the technique, if implemented as part of the water safety management, can detect rapidly the most common waterborne pathogens and fecal pollution indicators and therefore have a great early warning potential; can improve water safety for the consumer; can validate whether mitigation methods are working as intended; and can confirm the quality of the water at source and at the tap.


Assuntos
Água Potável/química , Monitoramento Ambiental , Purificação da Água , Abastecimento de Água , Microbiologia da Água , Qualidade da Água
15.
Sci Total Environ ; 652: 538-548, 2019 Feb 20.
Artigo em Inglês | MEDLINE | ID: mdl-30368183

RESUMO

Pellet softening of drinking water can provide aesthetic, socioeconomic and environmental benefits in areas with hard water. Calcium carbonate pellets are the main by-product from pellet softening and their characteristics determine their reuse potentials. We characterized pellets from a pilot-scale pellet reactor treating 16 water types at 8 Danish drinking water treatment plants to investigate the variations in pellet characteristics and how they depend on the influent water composition. The pellets consisted of up to 100% calcium as calcium carbonate, but contained often also impurities such as strontium, magnesium, iron and sodium, each contributing with up to 1.3% of the pellet mass. Other elements, including heavy metals, accounted for <0.04% of the pellet mass. The quartz sand seeding material contributed with up to 15% of the pellet mass and can be a barrier for pellet reuse. Therefore, replacing this with calcium carbonate (limestone) seeding material increases the pellet purity. Modelling the chemical speciation indicated that elements not forming carbonates (e.g. potassium and magnesium), are only incorporated into pellets to a limited extent. The concentrations of strontium, magnesium, manganese, iron and nickel in the pellets had a strong positive correlation with the influent water concentration. Consequently, the pellet purity increases if the concentration of these elements is reduced in the water before softening by other treatment technologies. Potassium, arsenic and zinc showed no or only a weak correlation. The pellets precipitated as calcite, and had a reactivity of ≤25.7% and a specific surface area of ≤0.32 m2/g, which limits the potential reuse as soil amendment in agriculture. The pellet mineralogy was independent of the investigated range of influent water quality and seeding materials. Including pellet characteristics when designing the softening process can improve pellet reuse, ultimately leading to a more environmentally sustainable drinking water supply.

16.
mBio ; 10(6)2019 11 05.
Artigo em Inglês | MEDLINE | ID: mdl-31690672

RESUMO

Nitrification, the oxidative process converting ammonia to nitrite and nitrate, is driven by microbes and plays a central role in the global nitrogen cycle. Our earlier investigations based on 16S rRNA and amoA amplicon analysis, amoA quantitative PCR and metagenomics of groundwater-fed biofilters indicated a consistently high abundance of comammox Nitrospira Here, we hypothesized that these nonclassical nitrifiers drive ammonia-N oxidation. Hence, we used DNA and RNA stable isotope probing (SIP) coupled with 16S rRNA amplicon sequencing to identify the active members in the biofilter community when subjected to a continuous supply of NH4+ or NO2- in the presence of 13C-HCO3- (labeled) or 12C-HCO3- (unlabeled). Allylthiourea (ATU) and sodium chlorate were added to inhibit autotrophic ammonia- and nitrite-oxidizing bacteria, respectively. Our results confirmed that lineage II Nitrospira dominated ammonia oxidation in the biofilter community. A total of 78 (8 by RNA-SIP and 70 by DNA-SIP) and 96 (25 by RNA-SIP and 71 by DNA-SIP) Nitrospira phylotypes (at 99% 16S rRNA sequence similarity) were identified as complete ammonia- and nitrite-oxidizing, respectively. We also detected significant HCO3- uptake by Acidobacteria subgroup10, Pedomicrobium, Rhizobacter, and Acidovorax under conditions that favored ammonia oxidation. Canonical Nitrospira alone drove nitrite oxidation in the biofilter community, and activity of archaeal ammonia-oxidizing taxa was not detected in the SIP fractions. This study provides the first in situ evidence of ammonia oxidation by comammox Nitrospira in an ecologically relevant complex microbiome.IMPORTANCE With this study we provide the first in situ evidence of ecologically relevant ammonia oxidation by comammox Nitrospira in a complex microbiome and document an unexpectedly high H13CO3- uptake and growth of proteobacterial and acidobacterial taxa under ammonia selectivity. This finding raises the question of whether comammox Nitrospira is an equally important ammonia oxidizer in other environments.


Assuntos
Bactérias/genética , DNA/genética , Água Subterrânea/microbiologia , Nitrificação/genética , RNA Ribossômico 16S/genética , Amônia/metabolismo , Archaea/genética , Processos Autotróficos/genética , Isótopos , Nitratos/metabolismo , Nitritos/metabolismo , Ciclo do Nitrogênio/genética , Oxirredução
17.
Front Microbiol ; 9: 2808, 2018.
Artigo em Inglês | MEDLINE | ID: mdl-30559723

RESUMO

Although earlier circumstantial observations have suggested the presence of iron oxidizing bacteria (IOB) in groundwater-fed rapid sand filters (RSF), ferrous iron (Fe(II)) oxidation in this environment is often considered a chemical process due to the highly oxic and circumneutral pH conditions. The low water temperature (5-10°C), typical of groundwaters, on the other hand, may reduce the rates of chemical Fe(II) oxidation, which may allow IOB to grow and compete with chemical Fe(II) oxidation. Hence, we hypothesized that IOB are active and abundant in groundwater-fed RSFs. Here, we applied a combination of cultivation and molecular approaches to isolate, quantify, and confirm the growth of IOB from groundwater-fed RSFs, operated at different influent Fe(II) concentrations. Isolates related to Undibacterium and Curvibacter were identified as novel IOB lineages. Gallionella spp. were dominant in all waterworks, whereas Ferriphaselus and Undibacterium were dominant at pre-filters of waterworks receiving groundwaters with high (>2 mg/l) Fe(II) concentrations. The high density and diversity of IOB in groundwater-fed RSFs suggest that neutrophilic IOB may not be limited to oxic/anoxic interfaces.

18.
ISME J ; 12(11): 2748-2756, 2018 11.
Artigo em Inglês | MEDLINE | ID: mdl-30002504

RESUMO

Despite recent efforts in identifying the determinants of invasion in microbial communities, experimental observations across different ecosystems are inconclusive. While relationships between resident community diversity and invasion success are often noted, community diversity says little about community assembly processes. Community assembly processes may provide a more inclusive framework to explain-and potentially prevent or facilitate-invasion. Here we let replicate nitrite-oxidizing bacterial guilds assemble under different conditions from a natural source community and study their compositional patterns to infer the relative importance of the assembly processes. Then, an invader strain from that same guild was introduced at one of three propagule pressures. We found no significant correlation between community diversity and invasion success. Instead, we observed that the effect of selection on invasion success was surpassed by the effect of drift, as inferred from the substantial influence of propagule pressure on invasion success. This dominance of drift can probably be generalized to other invasion cases with high phylogenetic similarity between invader and resident community members. In these situations, our results suggest that attempting to modulate the invasibility of a community by altering its diversity is futile because stochastic processes determine the invasion outcome. Increasing or reducing propagule pressure is then deemed the most efficient avenue to enhance or limit invasion success.


Assuntos
Fenômenos Fisiológicos Bacterianos , Microbiota , Bactérias/classificação , Bactérias/genética , Bactérias/metabolismo , Nitritos/metabolismo , Filogenia , Processos Estocásticos
19.
Water Res ; 132: 42-51, 2018 04 01.
Artigo em Inglês | MEDLINE | ID: mdl-29306091

RESUMO

Drinking water treatment plants based on groundwater may suffer from incomplete ammonium removal, which deteriorates drinking water quality and constrains water utilities in the operation of their plants. Ammonium is normally removed through nitrification in biological granular media filters, and recent studies have demonstrated that dosing of copper can stimulate the removal of ammonium. Here, we investigated if copper dosing could generically improve ammonium removal of biofilters, at treatment plants with different characteristics. Copper was dosed at ≤1.5 µg Cu/L to biofilters at 10 groundwater treatment plants, all of which had displayed several years of incomplete nitrification. Plants exceeded the Danish national water quality standard of 0.05 mg NH4+/L by a factor of 2-12. Within only 2-3 weeks of dosing, ammonium removal rates increased significantly (up to 150%). Nitrification was fully established, with ammonium effluent concentrations of <0.01 mg NH4+-N/L at most plants, regardless of the differences in raw water chemistry, ammonium loading rates, filter design and operation, or treatment plant configuration. However, for filters without primary filtration, it took longer time to reach complete ammonium removal than for filters receiving prefiltered water, likely due to sorption of copper to iron oxides, at plants without prefiltration. With complete ammonium removal, we subjected two plants to short-term loading rate upshifts, to examine the filters' ability to cope with loading rate variations. After 2 months of dosing and an average loading rate of 1.0 g NH4+-N/m3 filter material/h, the loading rate was upshifted by 50%. Yet, a filter managed to completely remove all the influent ammonium, showing that with copper dosing the filter had extra capacity to remove ammonium even beyond its normal loading rates. Depth sampling revealed that the ammonium removal rate of the filter's upper 10 cm increased more than 7-fold from 0.67 to 4.90 g NH4+-N/m3/h, and that nitrite produced from increased ammonium oxidation was completely oxidized further to nitrate. Hence, no problems with nitrite accumulation or breakthrough occurred. Overall, copper dosing generically enhanced nitrification efficiency and allowed a range of quite different plants to meet water quality standards, even at increased loading rates. The capacity increase is highly relevant in practice, as it makes filters more robust towards sudden ammonium loading rate variations.


Assuntos
Compostos de Amônio/metabolismo , Cobre , Nitrificação , Poluentes Químicos da Água/metabolismo , Purificação da Água/métodos , Cobre/química , Água Potável , Filtração , Nitratos/metabolismo , Oxirredução , Purificação da Água/instrumentação , Qualidade da Água
20.
J Microbiol Methods ; 151: 28-34, 2018 08.
Artigo em Inglês | MEDLINE | ID: mdl-29859217

RESUMO

Universal (i.e., targeting most bacteria/prokaryotes) 16S rRNA gene based amplicon sequencing is widely used for assessing microbial communities due to its low cost, time efficiency, and ability to provide a full overview of the community. However, it is currently unclear if it can yield reliable information on specific microbial guilds, as obtained by using primer sets targeting functional genes or specific16S rRNA gene sequences. Here, we compared the relative abundance, diversity, richness, and composition of selected guilds (nitrifiers), obtained from universal 16S rRNA gene based amplicon sequencing and from guild targeted approaches. The universal amplicon sequencing provided 1) accurate estimates of nitrifier composition, 2) clustering of the samples based on these compositions consistent with sample origin, 3) estimates of the relative abundance of the guilds correlated with those obtained from the targeted approaches and within ~1.2 orders of magnitude of them, but with measurable bias that should be considered when comparing estimates from both approaches. In contrast, the diversity and richness estimations using the universal 16S rRNA based amplicon sequencing were likely limited by the sequencing depth; therefore, we suggest preferring targeted approaches for assessing nitrifiers diversity and richness or using sequencing depth larger than those currently typically practiced. Overvall, we conclude that universal amplicon sequencing provides, in a single analysis, useful information on the abundance and composition of diverse guilds in complex environmental communities.


Assuntos
Sequenciamento de Nucleotídeos em Larga Escala/métodos , Microbiota/genética , RNA Ribossômico 16S/genética , Amônia/metabolismo , Archaea/genética , Archaea/metabolismo , Bactérias/genética , Bactérias/metabolismo , Biodiversidade , Análise por Conglomerados , Biologia Computacional , DNA Bacteriano/isolamento & purificação , Nitrificação , Nitritos/metabolismo , Nitrobacter/genética , Águas Residuárias , Purificação da Água
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