ATLANTIC BIRDS: a data set of bird species from the Brazilian Atlantic Forest.

South America holds 30% of the world's avifauna, with the Atlantic Forest representing one of the richest regions of the Neotropics. Here we have compiled a data set on Brazilian Atlantic Forest bird occurrence (150,423) and abundance samples (N = 832 bird species; 33,119 bird individuals) using multiple methods, including qualitative surveys, mist nets, point counts, and line transects). We used four main sources of data: museum collections, on-line databases, literature sources, and unpublished reports. The data set comprises 4,122 localities and data from 1815 to 2017. Most studies were conducted in the Florestas de Interior (1,510 localities) and Serra do Mar (1,280 localities) biogeographic sub-regions. Considering the three main quantitative methods (mist net, point count, and line transect), we compiled abundance data for 745 species in 576 communities. In the data set, the most frequent species were Basileuterus culicivorus, Cyclaris gujanensis, and Conophaga lineata. There were 71 singletons, such as Lipaugus conditus and Calyptura cristata. We suggest that this small number of records reinforces the critical situation of these taxa in the Atlantic Forest. The information provided in this data set can be used for macroecological studies and to foster conservation strategies in this biodiversity hotspot. No copyright restrictions are associated with the data set. Please cite this Data Paper if data are used in publications and teaching events.

Overlooked Bird Extinctions in Semideciduous Atlantic Forests.

The semideciduous forest is a prominent yet highly degraded phytophysiognomy within the Atlantic Forest. Historically, bird species inhabiting these forests occurred throughout central and western São Paulo state, south-eastern Brazil, until the mid-20th century. Many of these species have not been observed again or are nearing extinction within the state's inland forest fragments. This study reviews and compares historical and recent ornithological records, using museum specimens, literature, citizen science and recent field surveys to understand these species' current lack of records. In the early 20th century, extensive deforestation occurred statewide, resulting in the current forest fragments, which are currently in various stages of regeneration, conservation and isolation. Many of these fragments lack the specific habitats some species require, or they have not been recolonised due to insufficient connectivity with other forest fragments where these species still exist (particularly in the eastern Atlantic Forest). The non-detection of forest species in semideciduous forest fragments strongly suggests an unprecedented and largely unnoticed extinction scale. This pattern of defaunation, as predicted 30 years ago, may be prevalent across numerous Semideciduous Atlantic Forests in Brazil.

A taxonomic review of the Golden-green Woodpecker, Piculus chrysochloros (Aves: Picidae) reveals the existence of six valid taxa.

Piculus chrysochloros (Vieillot 1818) is a species of woodpecker that ranges from Argentina to Panama, occurring in lowland forests as well as Cerrado, Caatinga and Chaco vegetation. Currently, nine subspecies are accepted, but no study has evaluated individual variation within populations, so the status of these taxa remains uncertain. Here we review the taxonomy and distribution of this species, based on morphological and morphometric data from 267 specimens deposited in ornithological collections. Our results suggest the existence of six unambiguous taxonomic units that can be treated as phylogenetic species: Piculus xanthochloros (Sclater & Salvin 1875), from northwestern South America; Piculus capistratus (Malherbe 1862), from northern Amazonia west to the Branco River; Piculus laemostictus Todd 1937, from southern Amazonia; Piculus chrysochloros (Vieillot 1818), from the Cerrado, Caatinga and Chaco; Piculus paraensis (Snethlage 1907) from the Belém Center of Endemism; and Piculus polyzonus (Valenciennes 1826) from the Atlantic Forest. Both Brazilian endemics (P. polyzonus and P. paraensis) are threatened due to habitat loss. In addition, we found one undescribed form from the Tapajós-Tocantins interfluve, now under study, that may prove to be a valid species once more specimens and other data become available.

Avian Assemblages in Forest Fragments do not Sum to the Expected Regional Community in the Brazilian Atlantic Forest.

While bird diversity in the Atlantic Forest can be considered well-known, how the communities have been affected by deforestation and habitat fragmentation is not. We studied birds in 10 forest fragments of distinct sizes (all originally within the Atlantic Forest) in southern Bahia. In 5,391 bird encounters, we found 251 species, with 46 endemics and eight considered globally vulnerable or endangered. We also compiled a list of the 380 species that should comprise the expected regional assemblage, and found that only 66% of these species were present in all the fragments combined. Only 9% of all observed species were found in all fragments. The largest fragment (700 ha) had the greatest number of endemic species (40), and seven threatened species. All fragments had some conservation-important species (some were found in one or a few fragments), but no fragment included them all. Fragments shared 10% of endemic species, but overall, the contingent of endemics was unique in each fragment. Finally, most functional traits of bird assemblages decreased with increasing fragment size. Neither species richness nor similarity correlated with fragment size or distance between fragments, and unknown, non-random factors probably influence the likelihood of species survival in each fragment. Thus, to ensure the persistence of threatened species, as well as maintain the most common species, conservation management decisions should include all fragments together because no single fragment is most representative of the local community.

ATLANTIC BIRD TRAITS: a data set of bird morphological traits from the Atlantic forests of South America.

Scientists have long been trying to understand why the Neotropical region holds the highest diversity of birds on Earth. Recently, there has been increased interest in morphological variation between and within species, and in how climate, topography, and anthropogenic pressures may explain and affect phenotypic variation. Because morphological data are not always available for many species at the local or regional scale, we are limited in our understanding of intra- and interspecies spatial morphological variation. Here, we present the ATLANTIC BIRD TRAITS, a data set that includes measurements of up to 44 morphological traits in 67,197 bird records from 2,790 populations distributed throughout the Atlantic forests of South America. This data set comprises information, compiled over two centuries (1820-2018), for 711 bird species, which represent 80% of all known bird diversity in the Atlantic Forest. Among the most commonly reported traits are sex (n = 65,717), age (n = 63,852), body mass (n = 58,768), flight molt presence (n = 44,941), molt presence (n = 44,847), body molt presence (n = 44,606), tail length (n = 43,005), reproductive stage (n = 42,588), bill length (n = 37,409), body length (n = 28,394), right wing length (n = 21,950), tarsus length (n = 20,342), and wing length (n = 18,071). The most frequently recorded species are Chiroxiphia caudata (n = 1,837), Turdus albicollis (n = 1,658), Trichothraupis melanops (n = 1,468), Turdus leucomelas (n = 1,436), and Basileuterus culicivorus (n = 1,384). The species recorded in the greatest number of sampling localities are Basileuterus culicivorus (n = 243), Trichothraupis melanops (n = 242), Chiroxiphia caudata (n = 210), Platyrinchus mystaceus (n = 208), and Turdus rufiventris (n = 191). ATLANTIC BIRD TRAITS (ABT) is the most comprehensive data set on measurements of bird morphological traits found in a biodiversity hotspot; it provides data for basic and applied research at multiple scales, from individual to community, and from the local to the macroecological perspectives. No copyright or proprietary restrictions are associated with the use of this data set. Please cite this data paper when the data are used in publications or teaching and educational activities.

A new look at the holotype and type locality of Setopagis maculosa (Todd, 1920) Aves: Caprimulgidae), with remarks on its systematic relationships.

Setopagis maculosa (Todd, 1920) (Aves: Caprimulgidae) was described based on a single male specimen collected by Samuel Milton Klages in French Guiana, northeastern South America. Since then, no new specimens have been collected nor have any reliable records been made, and the validity of the species has been questioned. A detailed analysis of the holotype reveals that it has unique and distinctive morphological traits that support the validity and taxonomic status of the species, which is provisionally placed in Setopagis. We present new information on the type locality at the time of its collection, which may shed some light on the habitat preferences of the species, and we provide details on its plumage that have been largely overlooked and that will be important for future field identification.

Museum collections indicate bird defaunation in a biodiversity hotspot / Coleções de museus indicam defaunação de aves em um hotspot de biodiversidade

Abstract Ipanema National Forest, southeastern Brazil, once contained 340 bird species. Forest cover suffered for centuries from log exploitation and, as a result, most of the remaining forests are now an impoverished subset of the original vegetation. We show how the bird community changed over time by comparing historical and recent records. Currently, 228 species can be recorded, for a compilation of 410 species, of which 359 are documented. Some 89 forest species with historical records failed to be detected in recent surveys. Of the 72 Atlantic Forest or Cerrado endemic species, no more than 29 (40%) are still found. The bird community changed from one which used to be related to coastline rain forests to another, which relates more to drier semideciduous forests of the interior.

Resumo A Floresta Nacional de Ipanema, sudeste do Brasil, já abrigou 340 espécies de aves. Sua cobertura florestal sofreu por séculos com a exploração de madeira e, desse modo, a maior parte da vegetação remanescente é uma sub-representação daquela original. Neste artigo é demonstrado como a comunidade de aves foi modificada com o passar do tempo por meio da comparação entre registros históricos e recentes. Atualmente, 228 espécies podem ser registradas, para um total de 410 espécies, das quais 359 possuem documentação. Das espécies registradas historicamente, 89 não foram mais detectadas. Das 72 espécies endêmicas da Mata Atlântica ou do Cerrado, apenas 29 (40%) ainda podem ser encontradas. A comunidade de aves, outrora similar à de florestas ombrófilas costeiras, atualmente é mais relaciona à comunidade de matas semideciduais mais secas do interior.