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1.
Genes Dev ; 36(13-14): 765-769, 2022 07 01.
Artigo em Inglês | MEDLINE | ID: mdl-36342833

RESUMO

The nucleolus is best known for housing the highly ordered assembly line that produces ribosomal subunits. The >100 ribosome assembly factors in the nucleolus are thought to cycle between two states: an operative state (when integrated into subunit assembly intermediates) and a latent state (upon release from intermediates). Although it has become commonplace to refer to the nucleolus as "being a multilayered condensate," and this may be accurate for latent factors, there is little reason to think that such assertions pertain to the operative state of assembly factors.


Assuntos
Nucléolo Celular , RNA Ribossômico
2.
Int J Mol Sci ; 22(13)2021 Jun 23.
Artigo em Inglês | MEDLINE | ID: mdl-34201772

RESUMO

Nucleolar stress occurs when ribosome production or function declines. Nucleolar stress in stem cells or progenitor cells often leads to disease states called ribosomopathies. Drosophila offers a robust system to explore how nucleolar stress causes cell cycle arrest, apoptosis, or autophagy depending on the cell type. We provide an overview of nucleolar stress in Drosophila by depleting nucleolar phosphoprotein of 140 kDa (Nopp140), a ribosome biogenesis factor (RBF) in nucleoli and Cajal bodies (CBs). The depletion of Nopp140 in eye imaginal disc cells generates eye deformities reminiscent of craniofacial deformities associated with the Treacher Collins syndrome (TCS), a human ribosomopathy. We show the activation of c-Jun N-terminal Kinase (JNK) in Drosophila larvae homozygous for a Nopp140 gene deletion. JNK is known to induce the expression of the pro-apoptotic Hid protein and autophagy factors Atg1, Atg18.1, and Atg8a; thus, JNK is a central regulator in Drosophila nucleolar stress. Ribosome abundance declines upon Nopp140 loss, but unusual cytoplasmic granules accumulate that resemble Processing (P) bodies based on marker proteins, Decapping Protein 1 (DCP1) and Maternal expression at 31B (Me31B). Wild type brain neuroblasts (NBs) express copious amounts of endogenous coilin, but coilin levels decline upon nucleolar stress in most NB types relative to the Mushroom body (MB) NBs. MB NBs exhibit resilience against nucleolar stress as they maintain normal coilin, Deadpan, and EdU labeling levels.


Assuntos
Nucléolo Celular/genética , Corpos Enovelados/patologia , Proteínas de Drosophila/genética , Drosophila melanogaster/genética , Regulação da Expressão Gênica no Desenvolvimento , Proteínas de Ligação a RNA/genética , Estresse Fisiológico , Animais , Sistemas CRISPR-Cas , Corpos Enovelados/genética , Proteínas de Drosophila/antagonistas & inibidores , Drosophila melanogaster/fisiologia , Larva/genética , Larva/crescimento & desenvolvimento , Fosfoproteínas , Proteínas de Ligação a RNA/antagonistas & inibidores , Ribossomos/genética , Ribossomos/metabolismo
3.
J Eukaryot Microbiol ; 67(1): 125-131, 2020 01.
Artigo em Inglês | MEDLINE | ID: mdl-31529563

RESUMO

Representatives of the genus Anncaliia are known as natural parasites of dipteran and coleopteran insects, amphipod crustaceans, but also humans, primarily with immunodeficiency. Anncaliia algerae-caused fatal myositis is considered as an emergent infectious disease in humans. A. (=Nosema, Brachiola) algerae, the best studied species of the genus, demonstrates the broadest among microsporidia range of natural and experimental hosts, but it has never been propagated in Drosophila. We present ultrastructural analysis of development of A. algerae in visceral muscles and adipocytes of Drosophila melanogaster 2 wk after per oral experimental infection. We observed typical to Anncaliia spp. features of ultrastructure and cell pathology including spore morphology, characteristic extensions of the plasma membrane, and presence of "ridges" and appendages of tubular material at proliferative stages. Anncaliia algerae development in D. melanogaster was particularly similar to one of A. algerae and A.(Brachiola) vesicularum in humans with acute myositis. Given D. melanogaster is currently the most established genetic model, with a fully sequenced genome and easily available transgenic forms and genomic markers, a novel host-parasite system might provide new genetic tools to investigate host-pathogen interactions of A. algerae, as well to test antimicrosporidia drugs.


Assuntos
Drosophila melanogaster/microbiologia , Interações entre Hospedeiro e Microrganismos , Microsporídios/crescimento & desenvolvimento , Animais , Esporos Fúngicos/crescimento & desenvolvimento
4.
Mol Genet Genomics ; 294(4): 1073-1083, 2019 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-31006039

RESUMO

Nopp140, often called the nucleolar and Cajal body phosphoprotein (NOLC1), is an evolutionarily conserved chaperone for the transcription and processing of rRNA during ribosome subunit assembly. Metazoan Nopp140 contains an amino terminal LisH dimerization domain and a highly conserved carboxyl domain. A large central domain consists of alternating basic and acidic motifs of low sequence complexity. Orthologous versions of Nopp140 contain variable numbers of repeating basic-acidic units. While vertebrate Nopp140 genes use multiple exons to encode the central domain, the Nopp140 gene in Drosophila uses exclusively exon 2 to encode the central domain. Here, we define three overlapping repeat sequence patterns (P, P', and P″) within the central domain of D. melanogaster Nopp140. These repeat patterns are poorly conserved in other Drosophila species. We also describe a length polymorphism in exon 2 that pertains specifically to the P' pattern in D. melanogaster. The pattern displays either two or three 96 base pair repeats, respectively, referred to as Nopp140-Short and Nopp140-Long. Fly lines homozygous for one or the other allele, or heterozygous for both alleles, show no discernible phenotypes. PCR characterization of the long and short alleles shows a poorly defined, artifactual bias toward amplifying the long allele over the short allele. The significance of this polymorphism will be in discerning the largely unknown properties of Nopp140's large central domain in rDNA transcription and ribosome biogenesis.


Assuntos
Proteínas de Drosophila/química , Proteínas de Drosophila/genética , Drosophila melanogaster/metabolismo , Proteínas Nucleares/química , Proteínas Nucleares/genética , Polimorfismo Genético , Animais , Drosophila melanogaster/genética , Éxons , Fenótipo , Domínios Proteicos , RNA Ribossômico/genética , Proteínas de Ligação a RNA , Sequências Repetitivas de Ácido Nucleico
5.
Chromosoma ; 126(3): 375-388, 2017 06.
Artigo em Inglês | MEDLINE | ID: mdl-27150106

RESUMO

Four nucleostemin-like proteins (nucleostemin (NS) 1-4) were identified previously in Drosophila melanogaster. NS1 and NS2 are nucleolar proteins, while NS3 and NS4 are cytoplasmic proteins. We showed earlier that NS1 (homologous to human GNL3) enriches within the granular components (GCs) of Drosophila nucleoli and is required for efficient maturation or nucleolar release of the 60S subunit. Here, we show that NS2 is homologous to the human nucleostemin-like protein, Ngp1 (GNL2), and that endogenous NS2 is expressed in both progenitor and terminally differentiated cell types. Exogenous GFP-NS2 enriched within nucleolar GCs versus endogenous fibrillarin that marked the dense fibrillar components (DFCs). Like NS1, depletion of NS2 in midgut cells blocked the release of the 60S subunit as detected by the accumulation of GFP-RpL11 within nucleoli, and this likely led to the general loss of 60S subunits as shown by immunoblot analyses of RpL23a and RpL34. At the ultrastructural level, nucleoli in midgut cells depleted of NS2 displayed enlarged GCs not only on the nucleolar periphery but interspersed within the DFCs. Depletion of NS2 caused ribosome stress: larval midgut cells displayed prominent autophagy marked by the appearance of autolysosomes containing mCherry-ATG8a and the appearance of rough endoplasmic reticulum (rER)-derived isolation membranes. Larval imaginal wing disc cells depleted of NS2 induced apoptosis as marked by anti-caspase 3 labeling; loss of these progenitor cells resulted in defective adult wings. We conclude that nucleolar proteins NS1 and NS2 have similar but non-overlapping roles in the final maturation or nucleolar release of 60S ribosomal subunits.


Assuntos
Nucléolo Celular/metabolismo , Proteínas de Drosophila/metabolismo , Drosophila melanogaster/metabolismo , Proteínas de Ligação ao GTP/metabolismo , Subunidades Ribossômicas/metabolismo , Animais , Nucléolo Celular/genética , Proteínas de Drosophila/genética , Drosophila melanogaster/genética , Proteínas de Ligação ao GTP/genética , Proteínas Nucleares/genética , Proteínas Nucleares/metabolismo , Subunidades Ribossômicas/genética
7.
Chromosoma ; 124(2): 191-208, 2015 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-25384888

RESUMO

The nucleolar and Cajal body phosphoprotein of 140 kDa (Nopp140) is considered a ribosome assembly factor, but its precise functions remain unknown. To approach this problem, we deleted the Nopp140 gene in Drosophila using FLP-FRT recombination. Genomic PCR, reverse transcriptase-PCR (RT-PCR), and immunofluorescence microscopy confirmed the loss of Nopp140, its messenger RNA (mRNA), and protein products from all tissues examined. Nopp140-/- larvae arrested in the second instar stage and most died within 8 days. While nucleoli appeared intact in Nopp140-/- cells, the C/D small nucleolar ribonucleoprotein (snoRNP) methyltransferase, fibrillarin, redistributed to the nucleoplasm in variable amounts depending on the cell type; RT-PCRs showed that 2'-O-methylation of ribosomal RNA (rRNA) in Nopp140-/- cells was reduced at select sites within both the 18S and 28S rRNAs. Ultrastructural analysis showed that Nopp140-/- cells were deficient in cytoplasmic ribosomes, but instead contained abnormal electron-dense cytoplasmic granules. Immunoblot analysis showed a loss of RpL34, and metabolic labeling showed a significant drop in protein translation, supporting the loss of functional ribosomes. Northern blots showed that pre-RNA cleavage pathways were generally unaffected by the loss of Nopp140, but that R2 retrotransposons that naturally reside within the 28S region of normally silent heterochromatic Drosophila ribosomal DNA (rDNA) genes were selectively expressed in Nopp140-/- larvae. Unlike copia elements and the related R1 retrotransposon, R2 expression appeared to be preferentially dependent on the loss of Nopp140 and not on environmental stresses. We believe the phenotypes described here define novel intracellular ribosomopathies resulting from the loss of Nopp140.


Assuntos
Proteínas de Drosophila/genética , Drosophila/genética , Deleção de Genes , Proteínas Nucleares/genética , RNA Ribossômico/isolamento & purificação , Ribossomos/patologia , Animais , Núcleo Celular/metabolismo , Cromatina/genética , Cromatina/metabolismo , Proteínas Cromossômicas não Histona/genética , Proteínas Cromossômicas não Histona/metabolismo , Corpos Enovelados/genética , Corpos Enovelados/metabolismo , Proteínas de Drosophila/metabolismo , Feminino , Genômica , Masculino , Proteínas Nucleares/metabolismo , Fosfoproteínas/genética , Fosfoproteínas/metabolismo , Reação em Cadeia da Polimerase , RNA Ribossômico/genética , Proteínas de Ligação a RNA , Ribonucleoproteínas Nucleolares Pequenas/genética , Ribonucleoproteínas Nucleolares Pequenas/metabolismo
8.
Mol Biol Cell ; 18(6): 2179-91, 2007 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-17392509

RESUMO

Nopp140 associates with small nucleolar RNPs to chaperone pre-rRNA processing and ribosome assembly. Alternative splicing yields two isoforms in Drosophila: Nopp140-True is homologous to vertebrate Nopp140 particularly in its carboxy terminus, whereas Nopp140-RGG contains a glycine and arginine-rich (RGG) carboxy terminus typically found in vertebrate nucleolin. Loss of ribosome function or production at critical points in development leads to Minute phenotypes in Drosophila or the Treacher Collins syndrome (TCS) in humans. To ascertain the functional significance of Nopp140 in Drosophila development, we expressed interfering RNA using the GAL4/UAS system. Reverse transcription-PCR showed variable losses of Nopp140 mRNA in larvae from separate RNAi-expressing transgenic lines, whereas immunofluorescence microscopy with isoform-specific antibodies showed losses of Nopp140 in imaginal and polyploid tissues. Phenotypic expression correlated with the percent loss of Nopp140 transcripts: a >or=50% loss correlated with larval and pupal lethality, disrupted nuclear structures, and in some cases melanotic tumors, whereas a 30% loss correlated with adult wing, leg, and tergite deformities. We consider these adult phenotypes to be Minute-like and reminiscent of human craniofacial malformations associated with TCS. Similarly, overexpression of either isoform caused embryonic and larval lethality, thus indicating proper expression of Nopp140 is critical for normal development.


Assuntos
Proteínas de Drosophila/metabolismo , Drosophila melanogaster , Proteínas Nucleares/metabolismo , Fenótipo , Isoformas de Proteínas/metabolismo , Interferência de RNA , Proteínas de Ligação a RNA/metabolismo , Processamento Alternativo , Animais , Anticorpos/metabolismo , Anormalidades Congênitas , Modelos Animais de Doenças , Proteínas de Drosophila/genética , Drosophila melanogaster/anatomia & histologia , Drosophila melanogaster/fisiologia , Embrião não Mamífero/anatomia & histologia , Embrião não Mamífero/metabolismo , Genótipo , Humanos , Disostose Mandibulofacial , Proteínas Nucleares/genética , Isoformas de Proteínas/genética , RNA Mensageiro/genética , RNA Mensageiro/metabolismo , Proteínas de Ligação a RNA/genética , Proteínas Recombinantes de Fusão/genética , Proteínas Recombinantes de Fusão/metabolismo , Síndrome
9.
Biol Open ; 9(4)2020 04 13.
Artigo em Inglês | MEDLINE | ID: mdl-32184230

RESUMO

Different stem cells or progenitor cells display variable threshold requirements for functional ribosomes. This is particularly true for several human ribosomopathies in which select embryonic neural crest cells or adult bone marrow stem cells, but not others, show lethality due to failures in ribosome biogenesis or function (now known as nucleolar stress). To determine if various Drosophila neuroblasts display differential sensitivities to nucleolar stress, we used CRISPR-Cas9 to disrupt the Nopp140 gene that encodes two splice variant ribosome biogenesis factors (RBFs). Disruption of Nopp140 induced nucleolar stress that arrested larvae in the second instar stage. While the majority of larval neuroblasts arrested development, the mushroom body (MB) neuroblasts continued to proliferate as shown by their maintenance of deadpan, a neuroblast-specific transcription factor, and by their continued EdU incorporation. MB neuroblasts in wild-type larvae appeared to contain more fibrillarin and Nopp140 in their nucleoli as compared to other neuroblasts, indicating that MB neuroblasts stockpile RBFs as they proliferate in late embryogenesis while other neuroblasts normally enter quiescence. A greater abundance of Nopp140 encoded by maternal transcripts in Nopp140-/- MB neuroblasts of 1----2-day-old larvae likely rendered these cells more resilient to nucleolar stress.


Assuntos
Nucléolo Celular/genética , Nucléolo Celular/metabolismo , Drosophila/genética , Drosophila/metabolismo , Células-Tronco Neurais/metabolismo , Estresse Fisiológico , Animais , Sistemas CRISPR-Cas , Diferenciação Celular/genética , Modelos Animais de Doenças , Suscetibilidade a Doenças , Drosophila/embriologia , Proteínas de Drosophila/genética , Proteínas de Drosophila/metabolismo , Edição de Genes , Regulação da Expressão Gênica , Técnicas de Silenciamento de Genes , Humanos , Larva , Células-Tronco Neurais/citologia , Organogênese/genética , Proteínas de Ligação a RNA/genética , Proteínas de Ligação a RNA/metabolismo , Ribossomos/metabolismo
10.
Transcription ; 9(5): 273-285, 2018.
Artigo em Inglês | MEDLINE | ID: mdl-30063880

RESUMO

The ribosomal RNA genes (rDNA) of Drosophila melanogaster reside within centromere-proximal nucleolar organizers on both the X and Y chromosomes. Each locus contains between 200-300 tandem repeat rDNA units that encode 18S, 5.8S, 2S, and 28S ribosomal RNAs (rRNAs) necessary for ribosome biogenesis. In arthropods like Drosophila, about 60% of the rDNA genes have R1 and/or R2 retrotransposons inserted at specific sites within their 28S regions; these units likely fail to produce functional 28S rRNA. We showed earlier that R2 expression increases upon nucleolar stress caused by the loss of the ribosome assembly factor, Nucleolar Phosphoprotein of 140 kDa (Nopp140). Here we show that R1 expression is selectively induced by heat shock. Actinomycin D, but not α-amanitin, blocked R1 expression in S2 cells upon heat shock, indicating that R1 elements are transcribed by Pol I. A series of RT-PCRs established read-through transcription by Pol I from the 28S gene region into R1. Sequencing the RT-PCR products confirmed the 28S-R1 RNA junction and the expression of R1 elements within nucleolar rDNA rather than R1 elements known to reside in centromeric heterochromatin. Using a genome-wide precision run-on sequencing (PRO-seq) data set available at NCBI-GEO, we show that Pol I activity on R1 elements is negligible under normal non-heat shock conditions but increases upon heat shock. We propose that prior to heat shock Pol I pauses within the 5' end of R1 where we find a consensus "pause button", and that heat shock releases Pol I for read-through transcription farther into R1.


Assuntos
DNA Ribossômico/genética , Drosophila melanogaster/genética , Drosophila melanogaster/fisiologia , Resposta ao Choque Térmico/genética , Região Organizadora do Nucléolo/genética , RNA Polimerase I/metabolismo , Retroelementos/genética , Transcrição Gênica , Animais , Dactinomicina/farmacologia , Peróxido de Hidrogênio/farmacologia , Larva/efeitos dos fármacos , Inibidores da Síntese de Ácido Nucleico/farmacologia , Estresse Oxidativo/fisiologia , RNA Polimerase I/genética , RNA Ribossômico 28S/genética , RNA Ribossômico 28S/metabolismo
11.
Mol Biol Cell ; 13(1): 362-81, 2002 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-11809845

RESUMO

The Nopp140 gene of Drosophila maps within 79A5 of chromosome 3. Alternative splicing yields two variants. DmNopp140 (654 residues) is the sequence homolog of vertebrate Nopp140. Its carboxy terminus is 64% identical to that of the prototypical rat Nopp140. DmNopp140-RGG (688 residues) is identical to DmNopp140 throughout its first 551 residues, but its carboxy terminus contains a glycine/arginine-rich domain that is often found in RNA-binding proteins such as vertebrate nucleolin. Both Drosophila variants localize to nucleoli in Drosophila Schneider II cells and Xenopus oocytes, specifically within the dense fibrillar components. In HeLa cells, DmNopp140-RGG localizes to intact nucleoli, whereas DmNopp140 partitions HeLa nucleoli into phase-light and phase-dark regions. The phase-light regions contain DmNopp140 and endogenous fibrillarin, whereas the phase-dark regions contain endogenous nucleolin. When coexpressed, both Drosophila variants colocalize to HeLa cell nucleoli. Both variants fail to localize to endogenous Cajal bodies in Xenopus oocyte nuclei and in HeLa cell nuclei. Endogenous HeLa coilin, however, accumulates around the periphery of phase-light regions in cells expressing DmNopp140. The carboxy truncation (DmNopp140DeltaRGG) also fails to localize to Cajal bodies, but it forms similar phase-light regions that peripherally accumulate endogenous coilin. Conversely, we see no unusual accumulation of coilin in cells expressing DmNopp140-RGG.


Assuntos
Processamento Alternativo , Proteínas de Drosophila/genética , Drosophila melanogaster/metabolismo , Proteínas Nucleares/genética , Fosfoproteínas/genética , Motivos de Aminoácidos , Sequência de Aminoácidos , Animais , Nucléolo Celular/metabolismo , Células Cultivadas , Mapeamento Cromossômico , Proteínas de Drosophila/química , Proteínas de Drosophila/metabolismo , Drosophila melanogaster/genética , Feminino , Imunofluorescência , Células HeLa , Humanos , Dados de Sequência Molecular , Proteínas Nucleares/química , Proteínas Nucleares/metabolismo , Oócitos/metabolismo , Fosfoproteínas/química , Fosfoproteínas/metabolismo , Fosforilação , Estrutura Terciária de Proteína , RNA Mensageiro/metabolismo , Proteínas de Ligação a RNA/química , Proteínas de Ligação a RNA/genética , Proteínas de Ligação a RNA/metabolismo , Homologia de Sequência de Aminoácidos , Transfecção , Xenopus
12.
Int Rev Cytol ; 239: 99-178, 2004.
Artigo em Inglês | MEDLINE | ID: mdl-15464853

RESUMO

Nucleoli disassemble in prophase of the metazoan mitotic cycle, and they begin their reassembly (nucleologenesis) in late anaphase?early telophase. Nucleolar disassembly and reassembly were obvious to the early cytologists of the eighteenth and nineteenth centuries, and although this has lead to a plethora of literature describing these events, our understanding of the molecular mechanisms regulating nucleolar assembly and disassembly has expanded immensely just within the last 10-15 years. We briefly survey the findings of nineteenth-century cytologists on nucleolar assembly and disassembly, followed by the work of Heitz and McClintock on nucleolar organizers. A primer review of nucleolar structure and functions precedes detailed descriptions of modern molecular and microscopic studies of nucleolar assembly and disassembly. Nucleologenesis is concurrent with the reinitiation of rDNA transcription in telophase. The perichromosomal sheath, prenucleolar bodies, and nucleolar-derived foci serve as repositories for nucleolar processing components used in the previous interphase. Disassembly of the perichromosomal sheath along with the dynamic movements and compositional changes of the prenucleolar bodies and nucleolus-derived foci coincide with reactivation of rDNA synthesis within the chromosomal nucleolar organizers during telophase. Nucleologenesis is considered in various model organisms to provide breadth to our understanding. Nucleolar disassembly occurs at the onset of mitosis primarily as a result of the mitosis-specific phosphorylation of Pol I transcription factors and processing components. Although we have learned much regarding nucleolar assembly and disassembly, many questions still remain, and these questions are as vibrant for us today as early questions were for nineteenth- and early twentieth-century cytologists.


Assuntos
Nucléolo Celular/fisiologia , DNA Ribossômico/metabolismo , Região Organizadora do Nucléolo/fisiologia , Precursores de RNA/metabolismo , RNA Ribossômico/metabolismo , Animais , Nucléolo Celular/genética , Montagem e Desmontagem da Cromatina/genética , Montagem e Desmontagem da Cromatina/fisiologia , Citocinese/fisiologia , Humanos , Biologia Molecular , Proteínas Nucleares/metabolismo , Região Organizadora do Nucléolo/genética , Precursores de RNA/genética , RNA Ribossômico/genética , RNA Nuclear Pequeno/metabolismo , Transcrição Gênica/genética , Transcrição Gênica/fisiologia
13.
Nucleus ; 5(5): 402-26, 2014.
Artigo em Inglês | MEDLINE | ID: mdl-25482194

RESUMO

A veritable explosion of primary research papers within the past 10 years focuses on nucleolar and ribosomal stress, and for good reason: with ribosome biosynthesis consuming ~80% of a cell's energy, nearly all metabolic and signaling pathways lead ultimately to or from the nucleolus. We begin by describing p53 activation upon nucleolar stress resulting in cell cycle arrest or apoptosis. The significance of this mechanism cannot be understated, as oncologists are now inducing nucleolar stress strategically in cancer cells as a potential anti-cancer therapy. We also summarize the human ribosomopathies, syndromes in which ribosome biogenesis or function are impaired leading to birth defects or bone narrow failures; the perplexing problem in the ribosomopathies is why only certain cells are affected despite the fact that the causative mutation is systemic. We then describe p53-independent nucleolar stress, first in yeast which lacks p53, and then in other model metazoans that lack MDM2, the critical E3 ubiquitin ligase that normally inactivates p53. Do these presumably ancient p53-independent nucleolar stress pathways remain latent in human cells? If they still exist, can we use them to target >50% of known human cancers that lack functional p53?


Assuntos
Nucléolo Celular/genética , Ribossomos/genética , Estresse Fisiológico/genética , Proteína Supressora de Tumor p53/genética , Apoptose/genética , Pontos de Checagem do Ciclo Celular/genética , Humanos , Mutação , Neoplasias/genética , Neoplasias/terapia , Biossíntese de Proteínas/genética , Proteínas Proto-Oncogênicas c-mdm2/genética , Transdução de Sinais/genética , Proteína Supressora de Tumor p53/biossíntese
14.
Mol Biol Cell ; 29(7): 773-775, 2018 Apr 01.
Artigo em Inglês | MEDLINE | ID: mdl-31917828
15.
Nucleus ; 4(2): 123-33, 2013.
Artigo em Inglês | MEDLINE | ID: mdl-23412656

RESUMO

Nucleolar stress results when ribosome biogenesis is disrupted. An excellent example is the human Treacher Collins syndrome in which the loss of the nucleolar chaperone, Treacle, leads to p53-dependent apoptosis in embryonic neural crest cells and ultimately to craniofacial birth defects. Here, we show that depletion of the related nucleolar phosphoprotein, Nopp140, in Drosophila melanogaster led to nucleolar stress and eventual lethality when multiple tissues were depleted of Nopp140. We used TEM, immuno-blot analysis and metabolic protein labeling to show the loss of ribosomes. Targeted loss of Nopp140 in larval wing discs caused Caspase-dependent apoptosis which eventually led to defects in the adult wings. These defects were not rescued by a p53 gene deletion, as the craniofacial defects were in the murine model of TCS, thus suggesting that apoptosis caused by nucleolar stress in Drosophila is induced by a p53-independent mechanism. Loss of Nopp140 in larval polyploid midgut cells induced premature autophagy as marked by the accumulation of mCherry-ATG8a into autophagic vesicles. We also found elevated phenoloxidase A3 levels in whole larval lysates and within the hemolymph of Nopp140-depleted larvae vs. hemolymph from parental genotype larvae. Phenoloxidase A3 enrichment was coincident with the appearance of melanotic tumors in the Nopp140-depleted larvae. The occurrence of apoptosis, autophagy and phenoloxidase A3 release to the hemolymph upon nucleolar stress correlated well with the demonstrated activation of Jun N-terminal kinase (JNK) in Nopp140-depleted larvae. We propose that JNK is a central stress response effector that is activated by nucleolar stress in Drosophila larvae.


Assuntos
Nucléolo Celular/genética , Proteínas de Drosophila/genética , Proteínas Quinases JNK Ativadas por Mitógeno/genética , Disostose Mandibulofacial/genética , Proteínas Nucleares/genética , Animais , Apoptose/genética , Proteínas de Drosophila/metabolismo , Drosophila melanogaster/genética , Regulação da Expressão Gênica no Desenvolvimento , Hemolinfa/metabolismo , Humanos , Proteínas Quinases JNK Ativadas por Mitógeno/metabolismo , Larva/genética , Monofenol Mono-Oxigenase/genética , Monofenol Mono-Oxigenase/metabolismo , Proteínas Nucleares/metabolismo , Interferência de RNA , Proteínas de Ligação a RNA , Estresse Fisiológico/genética
16.
Mitochondrion ; 11(3): 397-404, 2011 May.
Artigo em Inglês | MEDLINE | ID: mdl-21168532

RESUMO

Delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDh) is a nuclear-encoded mitochondrial enzyme that catalyzes the second step in proline degradation. Mutations in human P5CDh cause type II hyperprolinemia, a complex syndrome displaying increased serum proline and mental disabilities. Conceptual gene CG7145 in Drosophila melanogaster encodes the orthologous DmP5CDh1. The mutant allele CG7145(f04633) contains a piggyBac transposon that truncates the enzyme by 83 residues. Heterozygous (CG7145(f04633)/TM3) individuals developed normally, while homozygous (CG7145(f04633)/CG7145(f04633)) individuals displayed proline levels twice that of normal, swollen mitochondria, and ultimately larval and pupal lethality. We believe this is the first correlation between the loss of P5CDh and morphological defects in mitochondria.


Assuntos
1-Pirrolina-5-Carboxilato Desidrogenase/metabolismo , Drosophila melanogaster/enzimologia , Drosophila melanogaster/metabolismo , Mitocôndrias/enzimologia , Mitocôndrias/fisiologia , Prolina/metabolismo , 1-Pirrolina-5-Carboxilato Desidrogenase/genética , Erros Inatos do Metabolismo dos Aminoácidos/patologia , Animais , Elementos de DNA Transponíveis , Modelos Animais de Doenças , Drosophila melanogaster/genética , Feminino , Masculino , Mitocôndrias/metabolismo , Mitocôndrias/ultraestrutura , Prolina Oxidase/deficiência , Deleção de Sequência , Análise de Sobrevida
17.
FEMS Microbiol Lett ; 291(2): 232-40, 2009 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-19146577

RESUMO

Eubacteria encode proteins that are required for nucleoid organization and for regulation of DNA-dependent processes. Of these histone-like proteins (Hlps), Escherichia coli HU has been shown to associate with the nucleoid and to regulate processes such as DNA repair and recombination. In contrast, the divergent HU homologs encoded by mycobacteria have been variously identified as involved in the physiology of dormancy, in the response to cold shock, or as laminin-binding proteins associated with the cell envelope. We show here, contrary to previous reports that the HU-related Hlp from Mycobacterium smegmatis associates with the nucleoid in vivo. Using indirect fluorescent antibody microscopy we show that cold shock causes Hlp to accumulate in the cytoplasm of M. smegmatis. No evidence of surface-associated Hlp was found in M. smegmatis cells treated for cell wall permeabilization. Quantitative Western blots indicate that exponentially growing cells contain c. 120 molecules per cell, with upregulation of Hlp after cold shock estimated to be c. 10-fold. That Hlp associates with the nucleoid in vivo suggests functions in DNA metabolism, perhaps in adaptation to environmental stress.


Assuntos
Proteínas de Bactérias/metabolismo , Nucléolo Celular/metabolismo , Histonas/metabolismo , Mycobacterium smegmatis/metabolismo , Sequência de Aminoácidos , Proteínas de Bactérias/química , Proteínas de Bactérias/genética , Nucléolo Celular/genética , Histonas/química , Histonas/genética , Dados de Sequência Molecular , Mycobacterium smegmatis/química , Mycobacterium smegmatis/citologia , Mycobacterium smegmatis/genética , Transporte Proteico , Homologia de Sequência de Aminoácidos
18.
Mol Biol Cell ; 20(20): 4424-34, 2009 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-19710426

RESUMO

Mammalian nucleostemin (NS) is a nucleolar guanosine triphosphate-binding protein implicated in cell cycle progression, stem cell proliferation, and ribosome assembly. Drosophila melanogaster contains a four-member nucleostemin family (NS1-4). NS1 is the closest orthologue to human NS; it shares 33% identity and 67% similarity with human NS. We show that NS1 has intrinsic GTPase and ATPase activity and that it is present within nucleoli of most larval and adult cells. Endogenous NS1 and lightly expressed green fluorescent protein (GFP)-NS1 enrich within the nucleolar granular regions as expected, whereas overexpressed GFP-NS1 localized throughout the nucleolus and nucleoplasm, and to several transcriptionally active interbands of polytene chromosomes. Severe overexpression correlated with the appearance of melanotic tumors and larval/pupal lethality. Depletion of 60% of NS1 transcripts also lead to larval and pupal lethality. NS1 protein depletion>95 correlated with the loss of imaginal island (precursor) cells in the larval midgut and to an apparent block in the nucleolar release of large ribosomal subunits in terminally differentiated larval midgut polyploid cells. Ultrastructural examination of larval Malpighian tubule cells depleted for NS1 showed a loss of cytoplasmic ribosomes and a concomitant appearance of cytoplasmic preautophagosomes and lysosomes. We interpret the appearance of these structures as indicators of cell stress response.


Assuntos
Trifosfato de Adenosina/metabolismo , Proteínas de Drosophila/fisiologia , Proteínas de Ligação ao GTP/fisiologia , Guanosina Trifosfato/metabolismo , Intestinos/citologia , Subunidades Ribossômicas Maiores/metabolismo , Sequência de Aminoácidos , Animais , Diferenciação Celular , Nucléolo Celular/enzimologia , Cromossomos/ultraestrutura , Sequência Conservada , Proteínas de Drosophila/deficiência , Proteínas de Drosophila/genética , Proteínas de Ligação ao GTP/deficiência , Proteínas de Ligação ao GTP/genética , Deleção de Genes , Técnicas de Silenciamento de Genes , Genes Reporter , Intestinos/enzimologia , Intestinos/crescimento & desenvolvimento , Larva , Lisossomos/fisiologia , Túbulos de Malpighi/enzimologia , Túbulos de Malpighi/ultraestrutura , Dados de Sequência Molecular , Neoplasias Experimentais/genética , Fagossomos/fisiologia , Pupa , Interferência de RNA , Alinhamento de Sequência , Homologia de Sequência de Aminoácidos
19.
Cell Tissue Res ; 323(1): 105-15, 2006 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-16158326

RESUMO

We expressed two green fluorescent protein (GFP)-tagged Nopp140 isoforms in transgenic Drosophila melanogaster to study nucleolar dynamics during oogenesis and early embryogenesis. Specifically, we wanted to test whether the quiescent oocyte nucleus stored maternal Nopp140 and then to determine precisely when nucleoli formed during embryogenesis. During oogenesis nurse cell nucleoli accumulated GFP-Nopp140 gradually such that posterior nurse cell nucleoli in egg chambers at stage 10 were usually brighter than the more anterior nurse cell nucleoli. Nucleoli within apoptotic nurse cells disassembled in stages 12 and 13, but not all GFP-Nopp140 entered the oocyte through inter-connecting cytoplasmic bridges. Oocytes, on the other hand, lost their nucleoli by stage 3, but GFP-Nopp140 gradually accumulated in oocyte nuclei during stages 8-13. Most oocyte nuclei at stage 10 stored GFP-Nopp140 uniformly, but many stage 10 oocytes accumulated GFP-Nopp140 in presumed endobodies or in multiple smaller spheres. All oocyte nuclei at stages 11-12 were uniformly labeled, and GFP-Nopp140 diffused to the cytoplasm upon nuclear disassembly in stage 13. GFP-Nopp140 reappeared during embryogenesis; initial nucleologenesis occurred in peripheral somatic nuclei during embryonic stage 13, one stage earlier than reported previously. These GFP-Nopp140-containing foci disassembled at the 13th syncytial mitosis, and a second nucleologenesis occurred in early stage 14. The resulting nucleoli occupied nuclear regions closest to the periphery of the embryos. Pole cells contained GFP-Nopp140 during the syncytial embryonic stages, but their nucleologenesis started at gastrulation.


Assuntos
Nucléolo Celular/fisiologia , Proteínas de Drosophila/metabolismo , Drosophila melanogaster/embriologia , Proteínas Nucleares/metabolismo , Oogênese , Animais , Nucléolo Celular/metabolismo , Proteínas de Drosophila/genética , Drosophila melanogaster/metabolismo , Gástrula/citologia , Gástrula/metabolismo , Proteínas de Fluorescência Verde/genética , Microscopia Confocal , Proteínas Nucleares/genética , Óvulo/metabolismo , Transporte Proteico , Proteínas de Ligação a RNA
20.
Chromosoma ; 111(7): 461-9, 2003 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-12707784

RESUMO

Vertebrate nucleolin is an abundant RNA-binding protein in the dense fibrillar component of active nucleoli. Nucleolin is modular in composition. Its amino-terminal third contains alternating acidic and basic domains, its middle section contains four consensus RNA-binding domains (cRBDs), and its carboxy-terminus contains a distinctive glycine/arginine-rich (GAR) domain with several RGG motifs. The arginines within these motifs are asymmetrically dimethylated. Several laboratories have shown that the GAR domain is necessary but not sufficient for the efficient localization of nucleolin to nucleoli. We examined the distribution of endogenous fibrillarin, Nopp140, and B23 when full-length and DeltaGAR nucleolin were expressed exogenously as enhanced green fluorescent protein (EGFP)-tagged fusions. Only B23 redistributed when DeltaGAR-EGFP was expressed at moderate to high levels, suggesting an in vivo interaction between nucleolin and B23. Next we substituted all ten arginines within the GAR domain of Chinese hamster ovary (CHO) nucleolin with lysines to test the hypothesis that methylation of the carboxy GAR domain is necessary for the nucleolar association of nucleolin. The lysine-substituted mutant was not an in vitro substrate for the yeast protein methyltransferase, Hmt1p/Rmt1. It was, however, able to associate properly with interphase nucleoli and with interphase pre-nucleolar bodies upon recovery from hypotonic shock. We conclude, therefore, that although the GAR domain is necessary for the efficient localization of nucleolin to nucleoli, methylation of this domain is not required for proper nucleolar localization.


Assuntos
Metiltransferases , Fosfoproteínas/química , Fosfoproteínas/genética , Proteínas de Ligação a RNA/química , Proteínas de Ligação a RNA/genética , Transportadores de Cassetes de Ligação de ATP/química , Transportadores de Cassetes de Ligação de ATP/metabolismo , Motivos de Aminoácidos , Sequência de Aminoácidos , Animais , Arginina/química , Células CHO , Nucléolo Celular/metabolismo , Nucléolo Celular/ultraestrutura , Cricetinae , DNA Complementar/metabolismo , Escherichia coli/metabolismo , Deleção de Genes , Proteínas de Fluorescência Verde , Células HeLa , Humanos , Peptídeos e Proteínas de Sinalização Intracelular , Proteínas Luminescentes/metabolismo , Lisina/química , Metilação , Dados de Sequência Molecular , Mutagênese Sítio-Dirigida , Mutação , Peptídeos/química , Estrutura Terciária de Proteína , Proteína-Arginina N-Metiltransferases , Transfecção , Nucleolina
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