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1.
Mol Cell ; 50(6): 894-907, 2013 Jun 27.
Artigo em Inglês | MEDLINE | ID: mdl-23806335

RESUMO

The inhibition of transcriptional elongation plays an important role in gene regulation in metazoans, including C. elegans. Here, we combine genomic and biochemical approaches to dissect a role of ZFP-1, the C. elegans AF10 homolog, in transcriptional control. We show that ZFP-1 and its interacting partner DOT-1.1 have a global role in negatively modulating the level of polymerase II (Pol II) transcription on essential widely expressed genes. Moreover, the ZFP-1/DOT-1.1 complex contributes to progressive Pol II pausing on essential genes during development and to rapid Pol II pausing during stress response. The slowing down of Pol II transcription by ZFP-1/DOT-1.1 is associated with an increase in H3K79 methylation and a decrease in H2B monoubiquitination, which promotes transcription. We propose a model wherein the recruitment of ZFP-1/DOT-1.1 and deposition of H3K79 methylation at highly expressed genes initiates a negative feedback mechanism for the modulation of their expression.


Assuntos
Proteínas de Caenorhabditis elegans/metabolismo , Caenorhabditis elegans/metabolismo , DNA Polimerase II/genética , Histona-Lisina N-Metiltransferase/metabolismo , Histonas/metabolismo , Fatores de Transcrição/metabolismo , Transcrição Gênica , Ubiquitinação , Animais , Caenorhabditis elegans/genética , Imunoprecipitação da Cromatina , DNA Polimerase II/metabolismo , Regulação da Expressão Gênica , Técnicas de Silenciamento de Genes , Genes de Helmintos , Resposta ao Choque Térmico , Regiões Promotoras Genéticas , Transporte Proteico , Interferência de RNA
2.
RSC Adv ; 14(33): 23873-23885, 2024 Jul 26.
Artigo em Inglês | MEDLINE | ID: mdl-39081655

RESUMO

Initially hydrogenated silicon (Si:H) thin films have been deposited using a plasma-enhanced chemical vapor deposition technique (PECVD) using silane (SiH4) as a precursor gas diluted in an inert gas argon (Ar) environment. Subsequently phosphine gas (PH3) was used as the n-type dopant and the deposition was carried out at a fixed substrate temperature of 200 °C. The PH3 flow rate was varied in the range of 0-1 sccm. The effect of PH3 flow rates on optical, electrical, and structural properties of hydrogenated amorphous and micro/nanocrystalline silicon films has been investigated and detailed analysis is presented. These films may find application in heterojunction solar cells as an emitter layer. Further, a crystalline silicon (c-Si) based simple p-n junction solar cell is simulated using an SCAP-1D tool to observe the effect of layer thickness and doping density on solar cell parameters.

3.
J Mol Model ; 27(2): 27, 2021 Jan 07.
Artigo em Inglês | MEDLINE | ID: mdl-33411088

RESUMO

In this work, to probe the charge transfer mechanism of methylammonium lead triiodide (CH3NH3PbI3), we have used density functional theory (DFT) and time-dependent density functional theory (TDDFT). We investigate ground and excited states optimized geometry, UV-vis spectrum and vibrational frequencies of CH3NH3PbI3 molecule. It is observed that in an excited state, the structural change is mostly localized in PbI3 part of the molecule. Mulliken charge analysis shows that lead (Pb) atom acquires a maximum positive charge and all iodine atoms get a negative charge. In addition to this, all the hydrogen atoms donate their charge to iodine atoms. Therefore, electron transfer from lead (Pb) and hydrogen atoms to the iodine atoms can be considered as a significant charge transfer mechanism. Vibrational frequencies are obtained and assigned with the help of hessian calculations. Vibrational mode at 225 cm-1 is identified as the NH3-I stretching.

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