Detalhe da pesquisa
1.
metaProbiotics: a tool for mining probiotic from metagenomic binning data based on a language model.
Brief Bioinform
; 25(2)2024 Jan 22.
Artigo
em Inglês
| MEDLINE | ID: mdl-38487846
2.
HoPhage: an ab initio tool for identifying hosts of phage fragments from metaviromes.
Bioinformatics
; 38(2): 543-545, 2022 01 03.
Artigo
em Inglês
| MEDLINE | ID: mdl-34383025
3.
PlasGUN: gene prediction in plasmid metagenomic short reads using deep learning.
Bioinformatics
; 36(10): 3239-3241, 2020 05 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-32091572
4.
The Microbiome Protocols eBook initiative: Building a bridge to microbiome research.
Imeta
; 3(2): e182, 2024 Apr.
Artigo
em Inglês
| MEDLINE | ID: mdl-38882487
5.
DeePVP: Identification and classification of phage virion proteins using deep learning.
Gigascience
; 112022 08 11.
Artigo
em Inglês
| MEDLINE | ID: mdl-35950840
6.
More Positive or More Negative? Metagenomic Analysis Reveals Roles of Virome in Human Disease-Related Gut Microbiome.
Front Cell Infect Microbiol
; 12: 846063, 2022.
Artigo
em Inglês
| MEDLINE | ID: mdl-35493727
7.
A Virtual Machine Platform for Non-Computer Professionals for Using Deep Learning to Classify Biological Sequences of Metagenomic Data.
J Vis Exp
; (175)2021 09 25.
Artigo
em Inglês
| MEDLINE | ID: mdl-34633370
8.
VirionFinder: Identification of Complete and Partial Prokaryote Virus Virion Protein From Virome Data Using the Sequence and Biochemical Properties of Amino Acids.
Front Microbiol
; 12: 615711, 2021.
Artigo
em Inglês
| MEDLINE | ID: mdl-33613485
9.
Corrigendum: VirionFinder: Identification of Complete and Partial Prokaryote Virus Virion Protein From Virome Data Using the Sequence and Biochemical Properties of Amino Acids.
Front Microbiol
; 12: 824018, 2021.
Artigo
em Inglês
| MEDLINE | ID: mdl-35116017
10.
DeePhage: distinguishing virulent and temperate phage-derived sequences in metavirome data with a deep learning approach.
Gigascience
; 10(9)2021 09 08.
Artigo
em Inglês
| MEDLINE | ID: mdl-34498685
11.
Predicting hosts based on early SARS-CoV-2 samples and analyzing the 2020 pandemic.
Sci Rep
; 11(1): 17422, 2021 08 31.
Artigo
em Inglês
| MEDLINE | ID: mdl-34465838
12.
Identification of the conjugative and mobilizable plasmid fragments in the plasmidome using sequence signatures.
Microb Genom
; 6(11)2020 11.
Artigo
em Inglês
| MEDLINE | ID: mdl-33074084
13.
PPR-Meta: a tool for identifying phages and plasmids from metagenomic fragments using deep learning.
Gigascience
; 8(6)2019 06 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-31220250