On the stereochemical inertness of the auride lone pair: ab initio studies of AAu (A = K, Rb, Cs).

The "lone" 6s electron pair often plays a key role in determining the structure and physical properties of compounds containing sixth-row elements in their lower oxidation states: Tl(+), Pb(2+), and Bi(3+) with the [Xe]4f(14)5d(10)6s(2) electronic configuration. The lone pairs on these ions are associated with reduced structural symmetries, including ferroelectric instabilities and other important phenomena. Here we consider the isoelectronic auride Au(-) ion with the [Xe]4f(14)5d(10)6s(2) electronic configuration. Ab initio density functional theory methods are employed to probe the effect of the 6s lone pair in alkali-metal aurides (KAu, RbAu, and CsAu) with the CsCl structure. The dielectric constants, Born effective charges, and structural instabilities suggest that the 6s lone pair on the Au(-) anion is stereochemically inert to minor mechanical and electrical perturbation. Pressures greater than 14 GPa, however, lead to reorganization of the electronic structure of CsAu and activate lone-pair involvement and Au-Au interactions in bonding, resulting in a transformation from the cubic CsCl structure type to an orthorhombic Cmcm structure featuring zigzag Au-Au chains.

Physiological and proteomic analyses of Fe(III)-reducing co-cultures of Desulfotomaculum reducens MI-1 and Geobacter sulfurreducens PCA.

We established Fe(III)-reducing co-cultures of two species of metal-reducing bacteria, the Gram-positive Desulfotomaculum reducens MI-1 and the Gram-negative Geobacter sulfurreducens PCA. Co-cultures were given pyruvate, a substrate that D. reducens can ferment and use as electron donor for Fe(III) reduction. G. sulfurreducens relied upon products of pyruvate oxidation by D. reducens (acetate, hydrogen) for use as electron donor in the co-culture. Co-cultures reduced Fe(III) to Fe(II) robustly, and Fe(II) was consistently detected earlier in co-cultures than pure cultures. Notably, faster cell growth, and correspondingly faster pyruvate oxidation, was observed by D. reducens in co-cultures. Global comparative proteomic analysis was performed to observe differential protein abundance during co-culture vs. pure culture growth. Proteins previously associated with Fe(III) reduction in G. sulfurreducens, namely c-type cytochromes and type IV pili proteins, were significantly increased in abundance in co-cultures relative to pure cultures. D. reducens ribosomal proteins were significantly increased in co-cultures, likely a reflection of faster growth rates observed for D. reducens cells while in co-culture. Furthermore, we developed multiple reaction monitoring (MRM) assays to quantitate specific biomarker peptides. The assays were validated in pure and co-cultures, and protein abundance ratios from targeted MRM and global proteomic analysis correlate significantly.

Topoisomerase II and tubulin inhibitors both induce the formation of apoptotic topoisomerase I cleavage complexes.

Topoisomerase I (Top1) is a ubiquitous enzyme that removes DNA supercoiling generated during transcription and replication. Top1 can be trapped on DNA as cleavage complexes by the anticancer drugs referred to as Top1 inhibitors as well as by alterations of the DNA structure. We reported recently that Top1 cleavage complexes (Top1cc) are trapped during apoptosis induced by arsenic trioxide and staurosporine. In the present study, we generalize the occurrence of apoptotic Top1cc in response to anticancer drugs, which by themselves do not directly interact with Top1: the topoisomerase II inhibitors etoposide, doxorubicin, and amsacrine, and the tubulin inhibitors vinblastine and Taxol. In all cases, the Top1cc form in the early phase of apoptosis and persist throughout the apoptotic process. Their formation is prevented by the caspase inhibitor benzyloxycarbonyl-Val-Ala-DL-Asp(OMe)-fluoromethylketone and the antioxidant N-acetyl-L-cysteine. We propose that the trapping of Top1cc is a general process of programmed cell death, which is caused by alterations of the DNA structure (oxidized bases and strand breaks) induced by caspases and reactive oxygen species.

Magnetic ordering and magnetodielectric phenomena in CoSeO4.

CoSeO(4) has a structure consisting of edge-sharing chains of Co(2+) octahedra which are held together by SeO(4)(2-) tetrahedra via shared oxygen atoms at the edges of the octahedra. DC magnetization measurements indicate a transition to an ordered state below 30 K. Powder neutron diffraction refinements suggest an ordered state with two unique antiferromagnetic chains within the unit cell. Isothermal magnetization measurements indicate a temperature-dependent field-induced magnetic transition below the ordering temperature. From neutron diffraction, we find that this corresponds to a realignment of spins from the canted configuration towards the c-axis. The dielectric constant shows a change in slope at the magnetic ordering temperature indicating an interplay between the spin and charge degrees of freedom.

Topoisomerase I requirement for death receptor-induced apoptotic nuclear fission.

Topoisomerase I (Top1) is known to relax DNA supercoiling generated by transcription, replication, and chromatin remodeling. However, it can be trapped on DNA as cleavage complexes (Top1cc) by oxidative and carcinogenic DNA lesions, base damage, and camptothecin treatment. We show here that Top1 is also functionally involved in death receptor-induced programmed cell death. In cells exposed to TRAIL or Fas ligand, Top1cc form at the onset of apoptosis. Those apoptotic Top1cc are prevented by caspase inhibition and Bax inactivation, indicating that both caspases and the mitochondrial death pathway are required for their formation. Accordingly, direct activation of the mitochondrial pathway by BH3 mimetic molecules induces apoptotic Top1cc. We also show that TRAIL-induced apoptotic Top1cc are preferentially formed by caspase-3-cleaved Top1 at sites of oxidative DNA lesions with an average of one apoptotic Top1cc/100 kbp. Examination of Top1 knock-down cells treated with TRAIL revealed similar DNA fragmentation but a marked decrease in apoptotic nuclear fission with reduced formation of nuclear bodies. Thus, we propose that Top1 contributes to the full apoptotic responses induced by TRAIL.