Detalhe da pesquisa
1.
Genome sequencing and analysis of the Tasmanian devil and its transmissible cancer.
Cell
; 148(4): 780-91, 2012 Feb 17.
Artigo
em Inglês
| MEDLINE | ID: mdl-22341448
2.
RCandy: an R package for visualizing homologous recombinations in bacterial genomes.
Bioinformatics
; 38(5): 1450-1451, 2022 02 07.
Artigo
em Inglês
| MEDLINE | ID: mdl-34864895
3.
Fast and flexible bacterial genomic epidemiology with PopPUNK.
Genome Res
; 29(2): 304-316, 2019 02.
Artigo
em Inglês
| MEDLINE | ID: mdl-30679308
4.
The MITRE trial protocol: a study to evaluate the microbiome as a biomarker of efficacy and toxicity in cancer patients receiving immune checkpoint inhibitor therapy.
BMC Cancer
; 22(1): 99, 2022 Jan 24.
Artigo
em Inglês
| MEDLINE | ID: mdl-35073853
5.
The Distribution and Spread of Susceptible and Resistant Neisseria gonorrhoeae Across Demographic Groups in a Major Metropolitan Center.
Clin Infect Dis
; 73(9): e3146-e3155, 2021 11 02.
Artigo
em Inglês
| MEDLINE | ID: mdl-32829411
6.
Genome-wide epistasis and co-selection study using mutual information.
Nucleic Acids Res
; 47(18): e112, 2019 10 10.
Artigo
em Inglês
| MEDLINE | ID: mdl-31361894
7.
Genomic evolution of Neisseria gonorrhoeae since the preantibiotic era (1928-2013): antimicrobial use/misuse selects for resistance and drives evolution.
BMC Genomics
; 21(1): 116, 2020 Feb 03.
Artigo
em Inglês
| MEDLINE | ID: mdl-32013864
8.
Systematic longitudinal survey of invasive Escherichia coli in England demonstrates a stable population structure only transiently disturbed by the emergence of ST131.
Genome Res
; 2017 Jul 18.
Artigo
em Inglês
| MEDLINE | ID: mdl-28720578
9.
Comprehensive global genome dynamics of Chlamydia trachomatis show ancient diversification followed by contemporary mixing and recent lineage expansion.
Genome Res
; 27(7): 1220-1229, 2017 07.
Artigo
em Inglês
| MEDLINE | ID: mdl-28588068
10.
Evaluation of parameters affecting performance and reliability of machine learning-based antibiotic susceptibility testing from whole genome sequencing data.
PLoS Comput Biol
; 15(9): e1007349, 2019 09.
Artigo
em Inglês
| MEDLINE | ID: mdl-31479500
11.
Pre-Columbian mycobacterial genomes reveal seals as a source of New World human tuberculosis.
Nature
; 514(7523): 494-7, 2014 Oct 23.
Artigo
em Inglês
| MEDLINE | ID: mdl-25141181
12.
Bayesian inference of ancestral dates on bacterial phylogenetic trees.
Nucleic Acids Res
; 46(22): e134, 2018 12 14.
Artigo
em Inglês
| MEDLINE | ID: mdl-30184106
13.
Correction: Dynamics and impact of homologous recombination on the evolution of Legionella pneumophila.
PLoS Genet
; 13(12): e1007116, 2017 Dec.
Artigo
em Inglês
| MEDLINE | ID: mdl-29194455
14.
Dynamics and impact of homologous recombination on the evolution of Legionella pneumophila.
PLoS Genet
; 13(6): e1006855, 2017 Jun.
Artigo
em Inglês
| MEDLINE | ID: mdl-28650958
15.
Interacting networks of resistance, virulence and core machinery genes identified by genome-wide epistasis analysis.
PLoS Genet
; 13(2): e1006508, 2017 02.
Artigo
em Inglês
| MEDLINE | ID: mdl-28207813
16.
Multiple major disease-associated clones of Legionella pneumophila have emerged recently and independently.
Genome Res
; 26(11): 1555-1564, 2016 11.
Artigo
em Inglês
| MEDLINE | ID: mdl-27662900
17.
Phandango: an interactive viewer for bacterial population genomics.
Bioinformatics
; 34(2): 292-293, 2018 Jan 15.
Artigo
em Inglês
| MEDLINE | ID: mdl-29028899
18.
Genome specialization and decay of the strangles pathogen, Streptococcus equi, is driven by persistent infection.
Genome Res
; 25(9): 1360-71, 2015 Sep.
Artigo
em Inglês
| MEDLINE | ID: mdl-26160165
19.
Seeding and Establishment of Legionella pneumophila in Hospitals: Implications for Genomic Investigations of Nosocomial Legionnaires' Disease.
Clin Infect Dis
; 64(9): 1251-1259, 2017 05 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-28203790
20.
Evolution of mobile genetic element composition in an epidemic methicillin-resistant Staphylococcus aureus: temporal changes correlated with frequent loss and gain events.
BMC Genomics
; 18(1): 684, 2017 Sep 04.
Artigo
em Inglês
| MEDLINE | ID: mdl-28870171