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1.
Environ Res ; 197: 110978, 2021 06.
Artigo em Inglês | MEDLINE | ID: mdl-33689825

RESUMO

The skin is a complex organ responsible for protecting the body from physical, chemical and biological insults. The skin microbiome is known to play an important role in protecting the host from skin infections. This study examined the skin microbiome and the changes in antibiotic resistance genes (ARGs), antibiotic biosynthesis genes (ABSGs) and virulence factor genes (VFGs) on human skin before and after swimming in the ocean. Skin microbiome samples were collected from human participants before and after they swam in the ocean, and at 6 h and 24 h post-swim. The samples were analyzed using 16S rRNA gene and shotgun metagenomic sequencing. The results showed that not only is the skin microbiome composition altered after swimming, but the abundance and diversity of ARGs, ABSGs and VFGs on the skin increased post-swim. Overall, there was an increase in total ARGs by 70.6% from before to after swimming. The elevated number of ARGs persisted and continued to increase for at least 6 h post-swim with greater than a 300% increase in comparison with samples collected before ocean swimming. The outcomes of the study support the epidemiological observations of increased risk of skin infections after swimming in the ocean. Cleaning the skin immediately after recreational ocean activities is recommended to reduce the opportunity for infection.


Assuntos
Antibacterianos , Natação , Antibacterianos/farmacologia , Resistência Microbiana a Medicamentos , Genes Bacterianos , Humanos , Oceanos e Mares , RNA Ribossômico 16S/genética
2.
Environ Res ; 194: 110667, 2021 03.
Artigo em Inglês | MEDLINE | ID: mdl-33400948

RESUMO

The discovery of cheap and eco-friendly functional materials for the removal of anionic heavy metal ions is still challenging in the treatment of heavy metal-contaminated water. Herein, a new poly(allyltrimethylammonium) grafted chitosan and biochar composite (PATMAC-CTS-BC) was introduced for the removal of selenate (SeO42-) in water. Results suggest that the PATMAC-CTS-BC showed a rapid removal of SeO42- with efficiency of >97% within 10 min and it followed a pseudo-second-order model. High capacity of SeO42- adsorption by the composite was achieved, with maximum value of 98.99 mg g-1 based on Langmuir model, considerably higher than most of reported adsorbents. The thermodynamic results reflected the spontaneous and exothermic nature of SeO42- adsorption onto the composite. The composite could be applied at a wide initial pH range (2-10) with high removal efficiency of SeO42- because of permanent positive charges of quaternary ammonium groups (=N+-). The removal mechanisms of SeO42- were mainly attributed to electrostatic interactions with =N+- and protonated -NH3+ groups, and redox-complexation interactions with -NH2, -NH-, and -OH groups. Besides SeO42-, the hexavalent chromium (Cr2O72-) was considered as example to further demonstrate the anion removal capability of cationic hydrogel-BC composite. The study outcomes open up new opportunities to efficiently remove anionic heavy metal ions (e.g., SeO42- and Cr2O72-) in water using these materials.


Assuntos
Quitosana , Poluentes Químicos da Água , Purificação da Água , Adsorção , Carvão Vegetal , Cinética , Ácido Selênico , Água , Poluentes Químicos da Água/análise
3.
Environ Sci Technol ; 49(19): 11264-80, 2015 Oct 06.
Artigo em Inglês | MEDLINE | ID: mdl-26317612

RESUMO

Catchment urbanization perturbs the water and sediment budgets of streams, degrades stream health and function, and causes a constellation of flow, water quality, and ecological symptoms collectively known as the urban stream syndrome. Low-impact development (LID) technologies address the hydrologic symptoms of the urban stream syndrome by mimicking natural flow paths and restoring a natural water balance. Over annual time scales, the volumes of stormwater that should be infiltrated and harvested can be estimated from a catchment-scale water-balance given local climate conditions and preurban land cover. For all but the wettest regions of the world, a much larger volume of stormwater runoff should be harvested than infiltrated to maintain stream hydrology in a preurban state. Efforts to prevent or reverse hydrologic symptoms associated with the urban stream syndrome will therefore require: (1) selecting the right mix of LID technologies that provide regionally tailored ratios of stormwater harvesting and infiltration; (2) integrating these LID technologies into next-generation drainage systems; (3) maximizing potential cobenefits including water supply augmentation, flood protection, improved water quality, and urban amenities; and (4) long-term hydrologic monitoring to evaluate the efficacy of LID interventions.


Assuntos
Cidades , Hidrologia , Chuva , Rios , Filtração/instrumentação , Modelos Teóricos , Água , Movimentos da Água
4.
Sci Total Environ ; 937: 173370, 2024 Aug 10.
Artigo em Inglês | MEDLINE | ID: mdl-38772489

RESUMO

To innovate the design of water treatment technology for algal toxin removal, this research investigated the mechanisms of cyanotoxin microcystin-LR (MC-LR) removal by a coupled adsorption-biodegradation. Eight types of woody carbonaceous adsorbents with and without Sphingopyxis sp. m6, a MC-LR degrading bacterium, were tested for MC-LR removal in water. All adsorbents showed good adsorption capability, removing 40 % to almost 100 % of the MC-LR (4.5 mg/L) within 48 h in batch experiments. Adding Sphingopyxis sp. m6 continuously promoted MC-LR biological removal, and successfully broke the barrier of adsorption capacity of tested adsorbents, removing >90 % of the MC-LR in most of the coupled adsorption-biodegradation tests, especially for those adsorbents had low physiochemical adsorption capacity. Variance partitioning analysis indicated that mesopore was the dominant contributor to adsorption capacity of MC-LR in pure adsorption treatments, which acted synergistically with electrical conductivity, polarity and total functional groups on the absorbent. Pore structure was the key factor beneficial for the growth of Sphingopyxis sp. m6 (51% contribution) and subsequent MC-LR biological removal rate (80 % contribution). Overall, pinewood-based carbonaceous adsorbents (especially pinewood activated carbon) exhibited the highest adsorption capacity towards MC-LR and provided the most favorable conditions for biological removal of MC-LR, largely because of their high mesopore volume, total functional groups and electric conductivity. The research outcomes not only deepened the quantitative understanding of mechanisms for MC-LR removal by the coupled process, but also provided theoretical basis for future materials' selection and modification during the practical application of coupled process.


Assuntos
Biodegradação Ambiental , Toxinas Marinhas , Microcistinas , Poluentes Químicos da Água , Purificação da Água , Microcistinas/metabolismo , Microcistinas/química , Adsorção , Purificação da Água/métodos , Sphingomonadaceae/metabolismo
5.
Appl Environ Microbiol ; 79(1): 294-302, 2013 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-23104412

RESUMO

This study investigated the occurrence of three types of vibrios in Southern California recreational beach waters during the peak marine bathing season in 2007. Over 160 water samples were concentrated and enriched for the detection of vibrios. Four sets of PCR primers, specific for Vibrio cholerae, V. parahaemolyticus, and V. vulnificus species and the V. parahaemolyticus toxin gene, respectively, were used for the amplification of bacterial genomic DNA. Of 66 samples from Doheny State Beach, CA, 40.1% were positive for V. cholerae and 27.3% were positive for V. parahaemolyticus, and 1 sample (1.5%) was positive for the V. parahaemolyticus toxin gene. Of the 96 samples from Avalon Harbor, CA, 18.7% were positive for V. cholerae, 69.8% were positive for V. parahaemolyticus, and 5.2% were positive for the V. parahaemolyticus toxin gene. The detection of the V. cholerae genetic marker was significantly more frequent at Doheny State Beach, while the detection of the V. parahaemolyticus genetic marker was significantly more frequent at Avalon Harbor. A probability-of-illness model for V. parahaemolyticus was applied to the data. The risk for bathers exposed to recreational waters at two beaches was evaluated through Monte Carlo simulation techniques. The results suggest that the microbial risk from vibrios during beach recreation was below the illness benchmark set by the U.S. EPA. However, the risk varied with location and the type of water recreation activities. Surfers and children were exposed to a higher risk of vibrio diseases. Microbial risk assessment can serve as a useful tool for the management of risk related to opportunistic marine pathogens.


Assuntos
Toxinas Bacterianas/genética , Praias , Água do Mar/microbiologia , Vibrioses/epidemiologia , Vibrio cholerae/isolamento & purificação , Vibrio parahaemolyticus/isolamento & purificação , Vibrio vulnificus/isolamento & purificação , California , Primers do DNA/genética , Humanos , Reação em Cadeia da Polimerase , Medição de Risco , Vibrio cholerae/genética , Vibrio parahaemolyticus/genética , Vibrio vulnificus/genética
6.
Astrobiology ; 23(8): 897-907, 2023 08.
Artigo em Inglês | MEDLINE | ID: mdl-37102710

RESUMO

Molecular biology methods and technologies have advanced substantially over the past decade. These new molecular methods should be incorporated among the standard tools of planetary protection (PP) and could be validated for incorporation by 2026. To address the feasibility of applying modern molecular techniques to such an application, NASA conducted a technology workshop with private industry partners, academics, and government agency stakeholders, along with NASA staff and contractors. The technical discussions and presentations of the Multi-Mission Metagenomics Technology Development Workshop focused on modernizing and supplementing the current PP assays. The goals of the workshop were to assess the state of metagenomics and other advanced molecular techniques in the context of providing a validated framework to supplement the bacterial endospore-based NASA Standard Assay and to identify knowledge and technology gaps. In particular, workshop participants were tasked with discussing metagenomics as a stand-alone technology to provide rapid and comprehensive analysis of total nucleic acids and viable microorganisms on spacecraft surfaces, thereby allowing for the development of tailored and cost-effective microbial reduction plans for each hardware item on a spacecraft. Workshop participants recommended metagenomics approaches as the only data source that can adequately feed into quantitative microbial risk assessment models for evaluating the risk of forward (exploring extraterrestrial planet) and back (Earth harmful biological) contamination. Participants were unanimous that a metagenomics workflow, in tandem with rapid targeted quantitative (digital) PCR, represents a revolutionary advance over existing methods for the assessment of microbial bioburden on spacecraft surfaces. The workshop highlighted low biomass sampling, reagent contamination, and inconsistent bioinformatics data analysis as key areas for technology development. Finally, it was concluded that implementing metagenomics as an additional workflow for addressing concerns of NASA's robotic mission will represent a dramatic improvement in technology advancement for PP and will benefit future missions where mission success is affected by backward and forward contamination.


Assuntos
Planetas , Voo Espacial , Estados Unidos , Humanos , Meio Ambiente Extraterreno , Metagenômica , United States National Aeronautics and Space Administration , Astronave , Políticas
7.
Sci Total Environ ; 813: 152556, 2022 Mar 20.
Artigo em Inglês | MEDLINE | ID: mdl-34952082

RESUMO

Waterborne diseases cause millions of deaths worldwide, especially in developing communities. The monitoring and rapid detection of microbial pathogens in water is critical for public health protection. This study reports the development of a proof-of-concept portable pathogen analysis system (PPAS) that can detect bacteria in water with the potential application in a point-of-sample collection setting. A centrifugal microfluidic platform is adopted to integrate bacterial cell lysis in water samples, nucleic acid extraction, and reagent mixing with a droplet digital loop mediated isothermal amplification assay for bacteria quantification onto a single centrifugal disc (CD). Coupled with a portable "CD Driver" capable of automating the assay steps, the CD functions as a single step bacterial detection "lab" without the need to transfer samples from vial-to-vial as in a traditional laboratory. The prototype system can detect Enterococcus faecalis, a common fecal indicator bacterium, in water samples with a single touch of a start button within 1 h and having total hands-on-time being less than 5 min. An add-on bacterial concentration cup prefilled with absorbent polymer beads was designed to integrate with the pathogen CD to improve the downstream quantification sensitivity. All reagents and amplified products are contained within the single-use disc, reducing the opportunity of cross contamination of other samples by the amplification products. This proof-of-concept PPAS lays the foundation for field testing devices in areas needing more accessible water quality monitoring tools and are at higher risk for being exposed to contaminated waters.


Assuntos
Técnicas Analíticas Microfluídicas , Microfluídica , Técnicas de Amplificação de Ácido Nucleico , Qualidade da Água
8.
Water (Basel) ; 14(8)2022 Apr 02.
Artigo em Inglês | MEDLINE | ID: mdl-37622131

RESUMO

Wastewater reclamation and reuse have the potential to supplement water supplies, offering resiliency in times of drought and helping meet increased water demands associated with population growth. Non-potable water reuse represents the largest potential reuse market. Yet economic constraints for new water reuse infrastructure and safety concerns due to microbial water quality, and especially viral pathogen exposure, limit widespread implementation of water reuse. Cost-effective, real-time methods to measure or indicate viral quality of recycled water would do much to instill greater confidence in the practice. This manuscript discusses advancements in monitoring and modeling of viral health risks in the context of water reuse. First, we describe the current wastewater reclamation processes and treatment technologies with an emphasis on virus removal. Second, we review technologies for the measurement of viruses, both culture- and molecular-based, along with their advantages and disadvantages. We introduce promising viral surrogates and specific pathogenic viruses that can serve as indicators of viral risk for water reuse. We suggest metagenomic analyses for viral screening and flow cytometry for quantification of virus-like particles as new approaches to complement more traditional methods. Third, we describe modeling to assess health risks through quantitative microbial risk assessments (QMRAs), the most common strategy to couple data on virus concentrations with human exposure scenarios. We then explore the potential of artificial neural networks (ANNs) to incorporate suites of data from wastewater treatment processes, water quality parameters, and viral surrogates. We recommend ANNs as a means to utilize existing water quality data, alongside new complementary measures of viral quality, to achieve cost-effective strategies to assess risks associated with infectious human viruses in recycled water. Given the review, we conclude that technologies are ready for identifying and implementing viral surrogates for health risk reduction in the next decade. Incorporating modeling with monitoring data would likely result in more robust assessment of water reuse risk.

9.
Sci Rep ; 11(1): 12542, 2021 06 15.
Artigo em Inglês | MEDLINE | ID: mdl-34131202

RESUMO

Dose-response models (DRMs) are used to predict the probability of microbial infection when a person is exposed to a given number of pathogens. In this study, we propose a new DRM for Staphylococcus aureus (SA), which causes skin and soft-tissue infections. The current approach to SA dose-response is only partially mechanistic and assumes that individual bacteria do not interact with each other. Our proposed two-compartment (2C) model assumes that bacteria that have not adjusted to the host environment decay. After adjusting to the host, they exhibit logistic/cooperative growth, eventually causing disease. The transition between the adjusted and un-adjusted states is a stochastic process, which the 2C DRM explicitly models to predict response probabilities. By fitting the 2C model to SA pathogenesis data, we show that cooperation between individual SA bacteria is sufficient (and, within the scope of the 2C model, necessary) to characterize the dose-response. This is a departure from the classical single-hit theory of dose-response, where complete independence is assumed between individual pathogens. From a quantitative microbial risk assessment standpoint, the mechanistic basis of the 2C DRM enables transparent modeling of dose-response of antibiotic-resistant SA that has not been possible before. It also enables the modeling of scenarios having multiple/non-instantaneous exposures, with minimal assumptions.


Assuntos
Infecções Bacterianas/microbiologia , Hormese/genética , Infecções Cutâneas Estafilocócicas/microbiologia , Staphylococcus aureus/patogenicidade , Infecções Bacterianas/patologia , Interações Hospedeiro-Patógeno/genética , Humanos , Modelos Teóricos , Infecções dos Tecidos Moles/microbiologia , Infecções dos Tecidos Moles/patologia , Infecções Cutâneas Estafilocócicas/patologia
10.
Data Brief ; 37: 107207, 2021 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-34189199

RESUMO

These data represent the abundance, diversity and predicted function gene profiles of the microbial communities present on human skin before and after swimming in the ocean. The skin microbiome has been shown to provide protection against infection from pathogenic bacteria. It is well-known that exposure to ocean water can cause skin infection, but little is known about how exposure can alter the bacterial communities on the skin. Skin microbiome samples were collected from human participants before and after swimming in the ocean. These data were used to analyze the changes in abundance and diversity of microbial communities on the skin and the changes in the functional profiles of the bacteria, specifically focusing on genes involved in antibiotic resistance and bacterial virulence.

11.
Sci Total Environ ; 762: 143056, 2021 Mar 25.
Artigo em Inglês | MEDLINE | ID: mdl-33268249

RESUMO

The COVID-19 pandemic has had a profound impact on human society. The isolation of SARS-CoV-2 from patients' feces on human cell line raised concerns of possible transmission through human feces including exposure to aerosols generated by toilet flushing and through the indoor drainage system. Currently, routes of transmission, other than the close contact droplet transmission, are still not well understood. A quantitative microbial risk assessment was conducted to estimate the health risks associated with two aerosol exposure scenarios: 1) toilet flushing, and 2) faulty connection of a floor drain with the building's main sewer pipe. SARS-CoV-2 data were collected from the emerging literature. The infectivity of the virus in feces was estimated based on a range of assumption between viral genome equivalence and infectious unit. The human exposure dose was calculated using Monte Carlo simulation of viral concentrations in aerosols under each scenario and human breathing rates. The probability of COVID-19 illness was generated using the dose-response model for SARS-CoV-1, a close relative of SARS-CoV-2, that was responsible for the SARS outbreak in 2003. The results indicate the median risks of developing COVID-19 for a single day exposure is 1.11 × 10-10 and 3.52 × 10-11 for toilet flushing and faulty drain scenario, respectively. The worst case scenario predicted the high end of COVID-19 risk for the toilet flushing scenario was 5.78 × 10-4 (at 95th percentile). The infectious viral loads in human feces are the most sensitive input parameter and contribute significantly to model uncertainty.


Assuntos
COVID-19 , SARS-CoV-2 , Aerossóis , Humanos , Pandemias , Medição de Risco
12.
Appl Environ Microbiol ; 76(5): 1442-8, 2010 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-20080992

RESUMO

Methods for rapid detection and quantification of infectious viruses in the environment are urgently needed for public health protection. A fluorescence-activated cell-sorting (FACS) assay was developed to detect infectious adenoviruses (Ads) based on the expression of viral protein during replication in cells. The assay was first developed using recombinant Ad serotype 5 (rAd5) with the E1A gene replaced by a green fluorescent protein (GFP) gene. Cells infected with rAd5 express GFP, which is captured and quantified by FACS. The results showed that rAd5 can be detected at concentrations of 1 to 10(4) PFU per assay within 3 days, demonstrating a linear correlation between the viral concentration and the number of GFP-positive cells with an r(2) value of >0.9. Following the same concept, FACS assays using fluorescently labeled antibodies specific to the E1A and hexon proteins, respectively, were developed. Assays targeting hexon showed greater sensitivity than assays targeting E1A. The results demonstrated that as little as 1 PFU Ads was detected by FACS within 3 days based on hexon protein, with an r(2) value greater than 0.9 over a 4-log concentration range. Application of this method to environmental samples indicated positive detection of infectious Ads in 50% of primary sewage samples and 33% of secondary treated sewage samples, but none were found in 12 seawater samples. The infectious Ads ranged in quantity between 10 and 165 PFU/100 ml of sewage samples. The results indicate that the FACS assay is a rapid quantification tool for detecting infectious Ads in environmental samples and also represents a considerable advancement for rapid environmental monitoring of infectious viruses.


Assuntos
Adenoviridae/isolamento & purificação , Citometria de Fluxo/métodos , Esgotos/virologia , Virologia/métodos , Anticorpos Antivirais , Bioensaio , Genes Reporter , Proteínas de Fluorescência Verde/metabolismo , Sensibilidade e Especificidade , Coloração e Rotulagem/métodos , Fatores de Tempo
13.
Harmful Algae ; 98: 101872, 2020 09.
Artigo em Inglês | MEDLINE | ID: mdl-33129463

RESUMO

Cyanobacteria blooms and associated cyanotoxins pose significant public health risks during water recreation. Oral ingestion is the only recognized route of toxin exposure in water recreation guidelines. This review examines human skin as a barrier for the prevention of cyanotoxin absorption and investigates the likelihood of negative health effects through dermal exposure. Epidemiological studies of health effects from recreational exposure to algal blooms and toxins are summarized to highlight the importance of better understanding the toxicological effect of dermal exposure. The ability of a specific cyanotoxin to penetrate human skin is inferred by its physiochemical properties according to transdermal drug studies. The review identifies a disparity between the human health effects described in algal bloom exposure case studies and the toxicological skin exposure data. Skin penetration by algal toxins is likely and deserves further investigation.


Assuntos
Cianobactérias , Água , Eutrofização , Humanos , Recreação , Abastecimento de Água
14.
Water Res ; 171: 115440, 2020 Mar 15.
Artigo em Inglês | MEDLINE | ID: mdl-31955059

RESUMO

Managing waterborne and water-related diseases is one of the most critical factors in the aftermath of hurricane-induced natural disasters. The goal of the study was to identify water-quality impairments in order to set the priorities for post-hurricane relief and to guide future decisions on disaster preparation and relief administration. Field investigations were carried out on St. Thomas, U.S. Virgin Islands as soon as the disaster area became accessible after the back-to-back hurricane strikes by Irma and Maria in 2017. Water samples were collected from individual household rain cisterns, the coastal ocean, and street-surface runoffs for microbial concentration. The microbial community structure and the occurrence of potential human pathogens were investigated in samples using next generation sequencing. Loop mediated isothermal amplification was employed to detect fecal indicator bacteria, Enterococcus faecalis. The results showed both fecal indicator bacteria and Legionella genetic markers were prevalent but were low in concentration in the water samples. Among the 22 cistern samples, 86% were positive for Legionella and 82% for Escherichia-Shigella. Enterococcus faecalis was detected in over 68% of the rain cisterns and in 60% of the coastal waters (n = 20). Microbial community composition in coastal water samples was significantly different from cistern water and runoff water. Although identification at bacterial genus level is not direct evidence of human pathogens, our results suggest cistern water quality needs more organized attention for protection of human health, and that preparation and prevention measures should be taken before natural disasters strike.


Assuntos
Tempestades Ciclônicas , Qualidade da Água , Fezes , Humanos , Ilhas , Chuva , Ilhas Virgens Americanas , Microbiologia da Água
15.
Environ Int ; 141: 105787, 2020 08.
Artigo em Inglês | MEDLINE | ID: mdl-32402981

RESUMO

Biofouling poses considerable technical challenges to agricultural irrigation systems. Controlling biofouling with strong chemical biocides is not only expensive and sometimes ineffective, but also contributes to environmental pollution. This study investigated the application of nanobubbles (NBs) on minimizing biofouling in agricultural irrigation water pipelines. Treatment performances were assessed using low concentration bubbles (LCB) and high concentration bubbles (HCB) together with a negative control (CK: no-NBs). 16 s rRNA gene sequencing and X-ray diffraction were used to characterize the microbial community and mineral compositions of biofilms in water emitters. Results demonstrated that NBs effectively mitigated biofouling through reducing fixed-biomass by 31.3-52.1%. A significantly different microbial composition was found in the biofilm community with reduced biodiversity. Molecular ecological network analysis revealed that NBs were detrimental to the mutualistic interactions among microbial species - destabilizing the network complexity and size, which was expressed as decreasing in extracellular polymers and biofilm biomass. Furthermore, NBs significantly decreased the deposition of carbonate, silicate, phosphate, and quartz on the pipe surfaces, leading to reductions of total content of minerals in biofilms. Therefore, this study demonstrated that NBs treatment could be an effective, and eco-friendly solution for biofouling control in agricultural water distribution systems.


Assuntos
Incrustação Biológica , Purificação da Água , Biofilmes , Incrustação Biológica/prevenção & controle , Águas Residuárias , Água
16.
Sci Total Environ ; 744: 140980, 2020 Nov 20.
Artigo em Inglês | MEDLINE | ID: mdl-32687996

RESUMO

The ongoing COVID-19 pandemic is, undeniably, a substantial shock to our civilization which has revealed the value of public services that relate to public health. Ensuring a safe and reliable water supply and maintaining water sanitation has become ever more critical during the pandemic. For this reason, researchers and practitioners have promptly investigated the impact associated with the spread of SARS-CoV-2 on water treatment processes, focusing specifically on water disinfection. However, the COVID-19 pandemic impacts multiple aspects of the urban water sector besides those related to the engineering processes, including sanitary, economic, and social consequences which can have significant effects in the near future. Furthermore, this outbreak appears at a time when the water sector was already experiencing a fourth revolution, transitioning toward the digitalisation of the sector, which redefines the Water-Human-Data Nexus. In this contribution, a product of collaboration between academics and practitioners from water utilities, we delve into the multiple impacts that the pandemic is currently causing and their possible consequences in the future. We show how the digitalisation of the water sector can provide useful approaches and tools to help address the impact of the pandemic. We expect this discussion to contribute not only to current challenges, but also to the conceptualization of new projects and the broader task of ameliorating climate change.


Assuntos
Betacoronavirus , Infecções por Coronavirus , Pandemias , Pneumonia Viral , COVID-19 , Humanos , SARS-CoV-2 , Água
17.
J Water Health ; 7(4): 650-6, 2009 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-19590132

RESUMO

Human viral contamination in drinking and recreational waters poses health risks. The application of PCR-based molecular technology has advanced our knowledge of the occurrence and prevalence of human viruses in water; however, it has provided no information on viral viability and infectivity. Four human cell lines were compared for their sensitivity to different serotypes of human adenoviruses using the TCID50 test. The sensitivity of each cell line varied with different serotypes of adenovirus. Human embryonic kidney cell line 293A and human lung carcinoma cell line A549 were the most sensitive, especially to enteric adenovirus 40 and 41. Plaque assay of primary sewage samples showed 293A can detect viral plaques in 7 of 13 primary sewage samples tested. Adenoviruses were also isolated using 293A from environmental water concentrates. Cloning and sequencing of environmental adenoviral isolates indentified them to be aligned with adenoviruses serotype 40 and serotype 5. The result of this study suggests that plaque assay with 293A cell line is suitable for detection of adenovirus in the aquatic environment. Combining this cell culture with molecular methods for viral assay in the aquatic environment will provide critical information for risk assessment.


Assuntos
Adenoviridae/isolamento & purificação , Esgotos/virologia , Microbiologia da Água , Abastecimento de Água , California , Carcinoma Hepatocelular/virologia , Linhagem Celular , Primers do DNA , Humanos , Rim/virologia , Neoplasias Hepáticas/virologia , Neoplasias Pulmonares/virologia , Sorotipagem , Ensaio de Placa Viral
18.
Sci Rep ; 9(1): 17093, 2019 11 19.
Artigo em Inglês | MEDLINE | ID: mdl-31745096

RESUMO

Quantifying the human health risk of microbial infection helps inform regulatory policies concerning pathogens, and the associated public health measures. Estimating the infection risk requires knowledge of the probability of a person being infected by a given quantity of pathogens, and this relationship is modeled using pathogen specific dose response models (DRMs). However, risk quantification for antibiotic-resistant bacteria (ARB) has been hindered by the absence of suitable DRMs for ARB. A new approach to DRMs is introduced to capture ARB and antibiotic-susceptible bacteria (ASB) dynamics as a stochastic simple death (SD) process. By bridging SD with data from bench experiments, we demonstrate methods to (1) account for the effect of antibiotic concentrations and horizontal gene transfer on risk; (2) compute total risk for samples containing multiple bacterial types (e.g., ASB, ARB); and (3) predict if illness is treatable with antibiotics. We present a case study of exposure to a mixed population of Gentamicin-susceptible and resistant Escherichia coli and predict the health outcomes for varying Gentamicin concentrations. Thus, this research establishes a new framework to quantify the risk posed by ARB and antibiotics.


Assuntos
Antibacterianos/administração & dosagem , Bactérias/efeitos dos fármacos , Infecções Bacterianas/tratamento farmacológico , Farmacorresistência Bacteriana , Modelos Estatísticos , Bactérias/isolamento & purificação , Infecções Bacterianas/microbiologia , Relação Dose-Resposta a Droga , Humanos
19.
Mar Pollut Bull ; 145: 595-603, 2019 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-31590829

RESUMO

Skin is the body's first line of defense against invading microorganisms. The skin microbiome has been shown to provide immunity against exogenous bacterial colonization. Recreational water exposures may alter the skin microbiome and potentially induce skin infections. This study explored the link between ocean water exposures and the human skin microbiome. Skin microbiome samples were collected, using swabs, from human participants' calves before and after they swam in the ocean, and at 6 hour and 24 hour post-swim. Genomic analysis showed that skin microbiomes were different among individuals before swimming. But after swimming, microbial communities were no longer different, which was demonstrated by a decrease in inter-sample diversity. Taxonomic analysis showed that ocean bacteria, including potential pathogens, replaced the native skin bacteria and remained on the skin for at least 24 hour post-swim. This research provides insight into the relationship between the human skin microbiome and the environment.


Assuntos
Microbiota , Água do Mar/microbiologia , Pele/microbiologia , Adulto , Bactérias/classificação , Bactérias/genética , Biodiversidade , Exposição Ambiental , Feminino , Humanos , Masculino , Microbiota/genética , Oceanos e Mares
20.
Water Res ; 149: 617-631, 2019 02 01.
Artigo em Inglês | MEDLINE | ID: mdl-30530122

RESUMO

Biological drinking water treatment technologies offer a cost-effective and sustainable approach to mitigate microcystin (MC) toxins from harmful algal blooms. To effectively engineer these systems, an improved predictive understanding of the bacteria degrading these toxins is required. This study reports an initial comparison of several unstructured kinetic models to describe MC microbial metabolism by isolated degrading populations. Experimental data was acquired from the literature describing both MC removal and cell growth kinetics when MC was utilized as the primary carbon and energy source. A novel model-data calibration approach melding global single-objective, multi-objective, and Bayesian optimization in addition to a fully Bayesian approach to model selection and hypothesis testing were applied to identify and compare parameter and predictive uncertainties associated with each model structure. The results indicated that models incorporating mechanisms of enzyme-MC saturation, affinity, and cooperative binding interactions of a theoretical single, rate limiting reaction accurately and reliably predicted MC degradation and bacterial growth kinetics. Diverse growth characteristics were observed among MC degraders, including moderate to high maximum specific growth rates, very low to substantial affinities for MC, high yield of new biomass, and varying degrees of cooperative enzyme-MC binding. Model predictions suggest that low specific growth rates and MC removal rates of degraders are expected in practice, as MC concentrations in the environment are well below saturating levels for optimal growth. Overall, this study represents an initial step towards the development of a practical and comprehensive kinetic model to describe MC biodegradation in the environment.


Assuntos
Microcistinas , Purificação da Água , Teorema de Bayes , Biodegradação Ambiental , Cinética
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