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1.
Anal Chem ; 96(23): 9379-9389, 2024 06 11.
Artigo em Inglês | MEDLINE | ID: mdl-38805056

RESUMO

Over the years, a number of state-of-the-art data analysis tools have been developed to provide a comprehensive analysis of data collected from gas chromatography-mass spectrometry (GC-MS). Unfortunately, the time shift problem remains unsolved in these tools. Here, we developed a novel comprehensive data analysis strategy for GC-MS-based untargeted metabolomics (AntDAS-GCMS) to perform total ion chromatogram peak detection, peak resolution, time shift correction, component registration, statistical analysis, and compound identification. Time shift correction was specifically optimized in this work. The information on mass spectra and elution profiles of compounds was used to search for inherent landmarks within analyzed samples to resolve the time shift problem across samples efficiently and accurately. The performance of our AntDAS-GCMS was comprehensively investigated by using four complex GC-MS data sets with various types of time shift problems. Meanwhile, AntDAS-GCMS was compared with advanced GC-MS data analysis tools and classic time shift correction methods. Results indicated that AntDAS-GCMS could achieve the best performance compared to the other methods.


Assuntos
Cromatografia Gasosa-Espectrometria de Massas , Metabolômica , Cromatografia Gasosa-Espectrometria de Massas/métodos , Metabolômica/métodos , Animais , Fatores de Tempo , Análise de Dados
2.
Appl Environ Microbiol ; 90(9): e0123724, 2024 09 18.
Artigo em Inglês | MEDLINE | ID: mdl-39207158

RESUMO

Hydroxysteroid dehydrogenases (HSDHs) catalyze the oxidation/reduction of hydroxyl/keto groups of steroids with high regio- or stereoselectivity, playing an essential role in producing optically pure chemicals. In this work, a novel approach was developed to simultaneously improve the stability and activity of 7ß-hydroxysteroid dehydrogenase (7ß-HSDH) by combining B-factor analysis and computer-aided prediction. Several advantageous mutants were identified, and the most promising variant, S51Y/P202Y, exhibited 2.3-fold improvements in catalytic activity, 3.3-fold in half-life at 40°C, and 4.7-fold in catalytic efficiency (kcat/Km), respectively. Structural modeling analysis showed that the shortened reversible oxidation reaction catalytic distance and the strengthened residue interactions compared to the wild type were attributed to the improved stability and activity of the obtained mutants. To synthesize ursodeoxycholic acid cost-effectively by mutant S51Y/P202Y, a NAD-kinase was employed to facilitate the substitution of nicotinamide adenine dinucleotide phosphate (NADP+) with nicotinamide adenine dinucleotide (NAD+) in the whole-cell catalysis system. The substrate 7-ketolithocholic acid (100 mM) was converted completely in 0.5 h, achieving a space-time yield of 1,887.3 g L-1 d-1. This work provided a general target-oriented strategy for obtaining stable and highly active dehydrogenase for efficient biosynthesis. IMPORTANCE: Hydroxysteroid dehydrogenases have emerged as indispensable tools in the synthesis of steroids, bile acids, and other steroid derivatives for the pharmaceutical and chemical industries. In this study, a novel approach was developed to simultaneously improve the stability and activity of a hydroxysteroid dehydrogenase by combining B-factor analysis and computer-aided prediction. This semi-rational method was demonstrated to be highly effective for enzyme engineering. In addition, NAD kinase was introduced to convert NAD+ to NADP+ for effective coenzyme regeneration in the whole-cell multienzyme-catalyzed system. This strategy reduces the significant economic costs associated with externally supplemented cofactors in NADP-dependent biosynthetic pathways.


Assuntos
Hidroxiesteroide Desidrogenases , Ácido Ursodesoxicólico , Hidroxiesteroide Desidrogenases/genética , Hidroxiesteroide Desidrogenases/metabolismo , Hidroxiesteroide Desidrogenases/química , Ácido Ursodesoxicólico/metabolismo , Ácido Ursodesoxicólico/química , Estabilidade Enzimática , Engenharia de Proteínas , Proteínas de Bactérias/genética , Proteínas de Bactérias/metabolismo , Proteínas de Bactérias/química , NADP/metabolismo , Escherichia coli/genética , Escherichia coli/metabolismo , Escherichia coli/enzimologia , NAD/metabolismo
3.
Inorg Chem ; 63(24): 10943-10948, 2024 Jun 17.
Artigo em Inglês | MEDLINE | ID: mdl-38818955

RESUMO

Investigating novel nonlinear optical (NLO) active units serves as a valuable method for broadening the research landscape of NLO materials. This study showcases the potential of the cytosinium cation (C4H6N3O)+ as a novel NLO-active motif through theoretical calculations. The title compound exhibited a wide band gap of 3.85 eV, along with a moderate second harmonic generation (SHG) response of 1.65 times that of KH2PO4 (KDP) and significant birefringence of 0.47. Its exceptional optical properties are primarily attributed to the synergy interaction between cations and anionic groups in the asymmetric unit.

4.
Inorg Chem ; 63(8): 3948-3954, 2024 Feb 26.
Artigo em Inglês | MEDLINE | ID: mdl-38350031

RESUMO

The key to searching novel nonlinear optical (NLO) crystals was effectively combining the NLO-active units to obtain a noncentrosymmetric structure. Nevertheless, the present predicament lies in the growing challenge of discovering novel crystals within conventional inorganic frameworks that surpass the properties of the current NLO materials. In view of this, researchers expanded their research focus to the organic-inorganic hybridization system; it is foreseeable to concentrate the advantages from several kinds of NLO-active units to acquire novel NLO crystals with superior properties. We herein report an organic-inorganic hybrid molybdate crystal, namely, [C(NH2)3]6Mo7O24 (GMO). It was successfully obtained via combining inorganic NLO-active MoO6 octahedra and organic π-conjugated [C(NH2)3]+ groups. GMO demonstrates a moderate second-harmonic-generation response, specifically measuring about 1.3 times the value of KDP. Additionally, it exhibits a significant birefringence value of 0.203 at the wavelength of 550 nm and possesses a wide band gap of 3.31 eV. Theoretical calculations suggest that the optical properties of the GMO are primarily influenced by the synergy effect of [C(NH2)3]+ groups between MoO6 octahedra.

5.
Inorg Chem ; 63(10): 4487-4491, 2024 Mar 11.
Artigo em Inglês | MEDLINE | ID: mdl-38416696

RESUMO

We herein report an unprecedented organic-inorganic hybrid borate incorporating a novel nonlinear-optical (NLO) active unit, namely, [C(NH2)3][B(C2O2H4)2]. The novel NLO active unit was derived from the condensation reaction between two glycol molecules and one (BO4)5- group. The title compound exhibits a moderate second-harmonic-generation effect (0.7 × KDP), a significant band gap (5.76 eV), and a suitable birefringence (0.078 at 550 nm). The optical properties are determined by the synergistic interaction between the C(NH2)3+ cation and the [B(C2O2H4)2]- group, as indicated by theoretical calculations.

6.
Bioorg Chem ; 152: 107744, 2024 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-39213799

RESUMO

Substrate access tunnel engineering is a useful strategy for enzyme modification. In this study, we improved the catalytic performance of Fe-type Nitrile hydratase (Fe-type NHase) from Pseudomonas fluorescens ZJUT001 (PfNHase) by mutating residue Q86 at the entrance of the substrate access tunnel. The catalytic activity of the mutant PfNHase-αQ86W towards benzonitrile, 2-cyanopyridine, 3-cyanopyridine, and 4-hydroxybenzonitrile was enhanced by 9.35-, 3.30-, 6.55-, and 2.71-fold, respectively, compared to that of the wild-type PfNHase (PfNHase-WT). In addition, the mutant PfNHase-αQ86W showed a catalytic efficiency (kcat/Km) towards benzonitrile 17.32-fold higher than the PfNHase-WT. Interestingly, the substrate preference of PfNHase-αQ86W shifted from aliphatic nitriles to aromatic nitrile substrates. Our analysis delved into the structural changes that led to this altered substrate preference, highlighting an expanded entrance tunnel region, theenlarged substrate-binding pocket, and the increased hydrophobic interactions between the substrate and enzyme. Molecular dynamic simulations and dynamic cross-correlation Matrix (DCCM) further supported these findings, providing a comprehensive explanation for the enhanced catalytic activity towards aromatic nitrile substrates.


Assuntos
Hidroliases , Nitrilas , Pseudomonas fluorescens , Pseudomonas fluorescens/enzimologia , Hidroliases/metabolismo , Hidroliases/química , Especificidade por Substrato , Nitrilas/química , Nitrilas/metabolismo , Estrutura Molecular , Biocatálise , Engenharia de Proteínas
7.
Zhongguo Dang Dai Er Ke Za Zhi ; 26(7): 723-729, 2024 Jul 15.
Artigo em Zh | MEDLINE | ID: mdl-39014949

RESUMO

OBJECTIVES: To explore the diagnostic efficacy of serum 14-3-3ß protein combined with fractional exhaled nitric oxide (FeNO) and conventional ventilatory lung function parameters in diagnosing bronchial asthma (referred to as "asthma") in children. METHODS: A prospective study included 136 children initially diagnosed with asthma during an acute episode as the asthma group, and 85 healthy children undergoing routine health checks as the control group. The study compared the differences in serum 14-3-3ß protein concentrations between the two groups, analyzed the correlation of serum 14-3-3ß protein with clinical indices, and evaluated the diagnostic efficacy of combining 14-3-3ß protein, FeNO, and conventional ventilatory lung function parameters for asthma in children. RESULTS: The concentration of serum 14-3-3ß protein was higher in the asthma group than in the control group (P<0.001). Serum 14-3-3ß protein showed a positive correlation with the percentage of neutrophils and total serum immunoglobulin E, and a negative correlation with conventional ventilatory lung function parameters (P<0.05). Cross-validation of combined indices showed that the combination of 14-3-3ß protein, FeNO, and the percentage of predicted value of forced expiratory flow at 75% of lung volume had an area under the curve of 0.948 for predicting asthma, with a sensitivity and specificity of 88.9% and 93.7%, respectively, demonstrating good diagnostic efficacy (P<0.001). The model had the best extrapolation. CONCLUSIONS: The combination of serum 14-3-3ß protein, FeNO, and the percentage of predicted value of forced expiratory flow at 75% of lung volume can significantly improve the diagnostic efficacy for asthma in children. Citation:Chinese Journal of Contemporary Pediatrics, 2024, 26(7): 723-729.


Assuntos
Proteínas 14-3-3 , Asma , Óxido Nítrico , Humanos , Asma/diagnóstico , Asma/sangue , Asma/fisiopatologia , Masculino , Feminino , Criança , Proteínas 14-3-3/sangue , Óxido Nítrico/análise , Óxido Nítrico/sangue , Pré-Escolar , Estudos Prospectivos , Testes de Função Respiratória , Teste da Fração de Óxido Nítrico Exalado , Adolescente , Testes Respiratórios
8.
Anal Chem ; 95(2): 638-649, 2023 01 17.
Artigo em Inglês | MEDLINE | ID: mdl-36599407

RESUMO

Data-dependent acquisition (DDA) mode in ultra-high-performance liquid chromatography-high-resolution mass spectrometry (UHPLC-HRMS) can provide massive amounts of MS1 and MS/MS information of compounds in untargeted metabolomics and can thus facilitate compound identification greatly. In this work, we developed a new platform called AntDAS-DDA for the automatic processing of UHPLC-HRMS data sets acquired under the DDA mode. Several algorithms, including extracted ion chromatogram extraction, feature extraction, MS/MS spectrum construction, fragment ion identification, and MS1 spectrum construction, were developed within the platform. The performance of AntDAS-DDA was investigated comprehensively with a mixture of standard and complex plant data sets. Results suggested that features in complex sample matrices can be extracted effectively, and the constructed MS1 and MS/MS spectra can benefit in compound identification greatly. The efficiency of compound identification can be improved by about 20%. AntDAS-DDA can take full advantage of MS/MS information in multiple sample analyses and provide more MS/MS spectra than single sample analysis. A comparison with advanced data analysis tools indicated that AntDAS-DDA may be used as an alternative for routine UHPLC-HRMS-based untargeted metabolomics. AntDAS-DDA is freely available at http://www.pmdb.org.cn/antdasdda.


Assuntos
Metabolômica , Espectrometria de Massas em Tandem , Espectrometria de Massas em Tandem/métodos , Metabolômica/métodos , Cromatografia Líquida de Alta Pressão/métodos , Íons , Análise de Dados
9.
Crit Rev Biotechnol ; 43(1): 121-141, 2023 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-34865578

RESUMO

Glycoside hydrolases (GHs) exhibit high activity and stability under harsh conditions, such as high temperatures and extreme pHs, given their wide use in industrial biotechnology. However, strategies for improving the acidophilic and alkalophilic adaptations of GHs are poorly summarized due to the complexity of the mechanisms of these adaptations. This review not only highlights the adaptation mechanisms of acidophilic and alkalophilic GHs under extreme pH conditions, but also summarizes the recent advances in engineering the pH performances of GHs with a focus on four strategies of protein engineering, enzyme immobilization, chemical modification, and medium engineering (additives). The examples described here summarize the methods used in modulating the pH performances of GHs and indicate that methods integrated in different protein engineering techniques or methods are efficient to generate industrial biocatalysts with the desired pH performance and other adapted enzyme properties.


Assuntos
Glicosídeo Hidrolases , Engenharia de Proteínas , Glicosídeo Hidrolases/química , Biotecnologia , Enzimas Imobilizadas/química
10.
Biotechnol Bioeng ; 120(6): 1521-1530, 2023 06.
Artigo em Inglês | MEDLINE | ID: mdl-36799475

RESUMO

Carbonyl reductase (CR)-catalyzed bioreduction in the organic phase and the neat substrate reaction system is a lasting challenge, placing higher requirements on the performance of enzymes. Protein engineering is an effective method to enhance the properties of enzymes for industrial applications. In the present work, a single point mutation E145A on our previously constructed CR mutant LsCRM3 , coevolved thermostability, and activity. Compared with LsCRM3 , the catalytic efficiency kcat /KM of LsCRM3 -E145A (LsCRM4 ) was increased from 6.6 to 21.9 s-1 mM-1 . Moreover, E145A prolonged the half-life t1/2 at 40°C from 4.1 to 117 h, T m ${T}_{m}$ was increased by 5°C, T 50 30 ${T}_{50}^{30}$ was increased by 14.6°C, and Topt was increased by 15°C. Only 1 g/L of lyophilized Escherichia coli cells expressing LsCRM4 completely reduced up to 600 g/L 2-chloro-1-(3,4-difluorophenyl)ethanone (CFPO) within 13 h at 45°C, yielding the corresponding (1S)-2-chloro-1-(3,4-difluorophenyl)ethanol ((S)-CFPL) in 99.5% eeP , with a space-time yield of 1.0 kg/L d, the substrate to catalyst ratios (S/C) of 600 g/g. Compared with LsCRM3 , the substrate loading was increased by 50%, with the S/C increased by 14 times. Compared with LsCRWT , the substrate loading was increased by 6.5 times. In contrast, LsCRM4 completely converted 600 g/L CFPO within 12 h in the neat substrate bioreaction system.


Assuntos
Mutação Puntual , Engenharia de Proteínas , Catálise , Etanol , Especificidade por Substrato
11.
Inorg Chem ; 62(28): 11009-11015, 2023 Jul 17.
Artigo em Inglês | MEDLINE | ID: mdl-37384798

RESUMO

The urgent need to promote the development of sustainable energy conversion requires exploration of highly efficient oxygen evolution reaction (OER) electrocatalysts. Defect engineering is a promising approach to address the inherent low electrical conductivity of metal oxides and limited reaction sites, for use in clean air applications and as electrochemical energy-storage electrocatalysts. In this article, oxygen defects are introduced into La2CoMnO6-δ perovskite oxides through the A-site cation defect strategy. By tuning the content of the A-site cation, oxygen defect concentration and corresponding electrochemical OER performance have been greatly improved. As a result, the defective La1.8CoMnO6-δ (L1.8CMO) catalyst exhibits exceptional OER activity with an overpotential of 350 mV at 10 mA cm-2, approximately 120 mV lower than that of the pristine perovskite. This enhancement can be attributed to the increase in surface oxygen vacancies, optimized eg occupation of transition metal at the B-site, and enlarged Brunauer-Emmett-Teller surface area. The reported strategy facilitates the development of novel defect-mediated perovskites in electrocatalysis.

12.
Inorg Chem ; 62(28): 11233-11239, 2023 Jul 17.
Artigo em Inglês | MEDLINE | ID: mdl-37409591

RESUMO

Developing economical, efficient, and durable oxygen evolution catalysts is crucial for achieving sustainable energy conversion and storage. Ruddlesden-Popper-type perovskite oxides are at the forefront of oxygen evolution reaction (OER) research. However, their activity and stability are far from satisfactory. Therefore, we emphasize the paradigm shift in designing efficient perovskite-type OER catalysts through anion defect engineering. The Cl anion-doped A2BO4-type perovskite oxides, SrLaCoO4-xClx (SLCOClx), were employed as highly efficient OER catalysts, wherein Cl could tune the electronic structure of SrLaCoO4 (SLCO) to enhance the OER activity effectively. Especially, SLCOCl0.15 demonstrates significantly enhanced OER activity, and the overpotential is only 370 mV at 10 mA·cm-2, which is significantly better than that of SLCO (510 mV). As confirmed by experience results and density functional theory (DFT) calculation, due to the doping of Cl, obviously increasing the ratio of Co2+/Co3+, more abundant oxygen vacancies (O22-/O-) are generated, and the electrical conductivity is increased, which together promote the improvement of OER activity.

13.
Inorg Chem ; 62(4): 1323-1327, 2023 Jan 30.
Artigo em Inglês | MEDLINE | ID: mdl-36657021

RESUMO

Herein, we report an unprecedented asymmetric guanidinium polyiodate, namely, C(NH2)3(I3O8)(HI3O8)(H2I2O6)(HIO3)4·3H2O (1). The title compound was obtained via the hybridization of polyiodate anions and planar π-conjugated C(NH2)3+; meanwhile, its strong second-harmonic-generation (SHG) response (2.1 × KDP, where KDP = KH2PO4) and wide band gap (3.89 eV) were mainly dominated by the synergy effect of the aforementioned structural units.

14.
Inorg Chem ; 62(12): 4757-4761, 2023 Mar 27.
Artigo em Inglês | MEDLINE | ID: mdl-36916671

RESUMO

We herein report a mixed organic cationic hybrid nitrate, namely, [C(NH2)2NHNO2][C(NH2)3](NO3)2 (1). It was successfully achieved via combining three different planar groups: [(C(NH2)2NHNO2]+, C(NH2)3+, and NO3-. First-principles calculations confirm that the [(C(NH2)2NHNO2]+ group is an excellent cationic nonlinear-optical (NLO)-active unit. The title compound exhibits a moderate second-harmonic-generation (SHG) response (1.5 × KDP), a wide band gap (3.58 eV), and a suitable birefringence of 0.071 at 550 nm. Theoretical calculations indicate that the synergy effect between the [(C(NH2)2NHNO2]+ and C(NH2)3+ groups dominates the SHG process.

15.
Crit Rev Food Sci Nutr ; 62(23): 6341-6358, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-33749401

RESUMO

Lactoferrin (Lf), a bioactive protein initially found in many biological secretions including milk, is regarded as the nutritional supplement or therapeutic ligand due to its multiple functions. Research on its mode of action reveals that intact Lf or its active peptide (i.e., lactoferricin) shows an important multifunctional performance. Oral delivery is considered as the most convenient administration route for this bioactive protein. Unfortunately, Lf is sensitive to the gastrointestinal (GI) physicochemical stresses and lactoferricin is undetectable in GI digesta. This review introduces the functionality of Lf at the molecular level and its degradation behavior in GI tract is discussed in detail. Subsequently, the absorption and transport of Lf from intestine into the blood circulation, which is pivotal to its health promoting effects in various tissues, and some assisting labeling methods are discussed. Stabilization technologies aiming at preserving the structural integrity and functional properties of orally administrated Lf are summarized and compared. Altogether, this work comprehensively reviews the structure-function relationship of Lf, its oral fate and the development of stabilization technologies for the enhancement of the oral bioavailability of Lf. The existing limitations and scope for future research are also discussed.


Assuntos
Lactoferrina , Leite , Animais , Fenômenos Químicos , Trato Gastrointestinal/metabolismo , Leite/química
16.
Inorg Chem ; 61(26): 10182-10189, 2022 Jul 04.
Artigo em Inglês | MEDLINE | ID: mdl-35708526

RESUMO

The combination of organic and inorganic nonlinear active units to obtain organic-inorganic hybrid materials has been proved to be a very effective method to obtain nonlinear optical (NLO) materials with excellent properties. Herein we reported two hybrid melamine-based compounds, namely, acentric (C3H7N6)6(H2PO4)4(HPO4)·4H2O (1) and centrosymmetric (C3H7N6)2SO4·2H2O (2), which were synthesized via facile solvent evaporation method. Compound 1 features a three-dimensional (3D) network structure composed of ∞[(H2PO4)4(HPO4)(H2O)4]6- layers which are further linked with ∞[(C3H7N6)6]6+ layers via hydrogen bonds. Compound 2 displays a 3D structure composed of [(C3H7N6)2(SO4)(H2O)2]∞ layers further linked with each other by hydrogen bonds. Compound 1 presents a second harmonic generation signal of about 0.1 × KDP. Furthermore, UV-vis and infrared spectra, thermal analyses, and theoretical calculation were also adopted to evaluate its NLO performance. The theoretical calculations showed that the SHG response and large birefringence of 1 were primarily caused by the (C3H7N6)+, (H2PO4)-, and (HPO4)2- groups.

17.
Inorg Chem ; 61(37): 14880-14886, 2022 Sep 19.
Artigo em Inglês | MEDLINE | ID: mdl-36054831

RESUMO

In order to meet the growing needs for the laser technology and optics industries, the goal is to find suitable fundamental building blocks with large nonlinear-optical (NLO) coefficients and birefringence for an excellent-performance NLO or birefringent system. Via preliminary investigations and calculations, it has been found that the planar π-conjugated group (C9H5O6)- possesses large polarizability anisotropy (δ) and hyperpolarizability (ßmax), comparable to well-known groups such as (B3O6)3-, (C3N3O3)3-, etc. Herein, we report a new alkali-metal 3,5-dicarboxybenzoate, KC9H5O6(H2O) (KH2BTC), which crystallized in the acentric space group Pna21. Second-harmonic-generation (SHG) measurements of KH2BTC under 1064 nm laser radiation show that the SHG response of KH2BTC is 1.2 times that of KDP with type I phase-matching behavior. Birefringence measurements show that KH2BTC owns a large birefringence of about 0.372 at 550 nm. The band gap of KH2BTC obtained by ultraviolet (UV) diffuse-reflectance spectroscopy is 3.91 eV, indicating that KH2BTC has potential applications as UV NLO or birefringent materials. Theoretical calculation further confirmed that the impressive optical properties of KH2BTC are derived from the large polarizability anisotropy of the (C9H5O6)- anions.

18.
Bioorg Chem ; 127: 105991, 2022 10.
Artigo em Inglês | MEDLINE | ID: mdl-35816872

RESUMO

Traditional screening methods of enzyme engineering often require building large mutant libraries to screen for potentially beneficial sites, which are often time-consuming and labor-intensive with low mining efficiency. In this study, a novel enzyme engineering strategy was established to modify carbonyl reductase LsCR for the synthesis of (1S)-2-chloro-1-(3,4-difluorophenyl) ethanol ((S)-CFPL), which is a key intermediate of anticoagulant drug ticagrelor. The strategy was developed by combining HotSpot, FireProt and multiple sequence alignment, resulting in the construction of a "small and smart" mutant library including 10 mutations. Among them, 5 mutations were positive, resulting in a 50% mining accuracy of beneficial sites. Finally, a highly active mutant LsCRM3 (N101D/A117G/F147L) was obtained by further screening through saturation mutation and iterative mutation. Compared with wild type (WT) LsCR, the catalytic activity of LsCRM3 was increased by 4.7 times, the catalytic efficiency kcat/KM value was increased by 2.9 times, and the half-life t1/2 at 40 °C was increased by 1.3 times. Due to the low aqueous solubility of the substrate 2-chloro-1-(3,4-difluorophenyl) ethanone (CFPO), isopropanol was used as not only the co-substrate but also co-solvent. In the presence of 40% (v/v) isopropanol, LsCRM3 completely reduced 400 g/L CFPO to enantiomerically pure CFPL (99.9%, e.e.) in 11 h with a space-time yield (STY) as high as 809 g/L∙d.


Assuntos
2-Propanol , Etanol , Oxirredutases do Álcool/genética , Catálise , Estereoisomerismo
19.
Biotechnol Bioeng ; 118(11): 4441-4452, 2021 11.
Artigo em Inglês | MEDLINE | ID: mdl-34374988

RESUMO

Enzyme engineering usually generates trade-offs between activity, stability, and selectivity. Herein, we report semirational engineering of an aldo-keto reductase (AKR) KmAKR for simultaneously enhancing its thermostability and catalytic activity. Previously, we constructed KmAKRM9 (W297H/Y296W/K29H/Y28A/T63M/A30P/T302S/N109K/S196C), which showed outstanding activity towards t-butyl 6-chloro-(3R,5S)-dihydroxyhexanoate ((3R,5S)-CDHH), and t-butyl 6-cyano-(3R,5R)-dihydroxyhexanoate, the key chiral building blocks of rosuvastatin and atorvastatin. Under the guidance of computer-aided design including consensus residues analysis and molecular dynamics (MD) simulations, K164, S182, S232, and Q266 were dug out for their thermostability conferring roles, generating the "best" mutant KmAKRM13 (W297H/Y296W/K29H/Y28A/T63M/A30P/T302S/N109K/S196C/K164E/S232A/S182H/Q266D). The Tm and T5015 values of KmAKRM13 were 10.4 and 6.1°C higher than that of KmAKRM9 , respectively. Moreover, it displayed a significantly elevated organic solvent tolerance over KmAKRM9 . Structural analysis indicated that stabilization of the α-helixes mainly contributed to thermostability enhancement. Under the optimized conditions, KmAKRM13 completely asymmetrically reduced 400 g/l t-butyl 6-chloro-(5S)-hydroxy-3-oxohexanoate ((5S)-CHOH) in 8.0 h at a high substrate to catalyst ratio (S/C) of 106.7 g/g, giving diastereomerically pure (3R,5S)-CDHH (>99.5% d.e.P ) with a space-time yield (STY) of 449.2 g/l·d.


Assuntos
Aldo-Ceto Redutases/química , Candida parapsilosis/enzimologia , Proteínas Fúngicas/química , Simulação de Acoplamento Molecular , Simulação de Dinâmica Molecular , Engenharia de Proteínas , Aldo-Ceto Redutases/genética , Candida parapsilosis/genética , Proteínas Fúngicas/genética
20.
Nanotechnology ; 32(24)2021 Mar 23.
Artigo em Inglês | MEDLINE | ID: mdl-33690179

RESUMO

An oral multi-unit delivery system was developed by incorporating the nanoparticle (NP) into the nanofiber mat and its efficiency for intestinal-specific delivery and controlled release of a peptide (insulin) was investigated. Initially, the influence of deacetylation degree (DD) of chitosan and ionic gelation methods on the properties of NPs was studied. High DD (95%) chitosan was attributed to higher encapsulation efficiency and stability when crosslinked with polyanion tripolyphosphate. Subsequently, the multi-unit system was fabricated using a pH-sensitive polymer (sodium alginate) as the coating layer to further encapsulate the NP. Fiber mat with an average diameter of 481 ± 47 nm could significantly decrease the burst release of insulin in acidic condition and release most amount of insulin (>60%) in the simulated intestinal medium. Furthermore, the encapsulated peptide remained in good integrity. This multi-unit carrier provides the better-designed vehicle for intestinal-specific delivery and controlled release of the peptide.


Assuntos
Quitosana/química , Insulina/administração & dosagem , Administração Oral , Células CACO-2 , Preparações de Ação Retardada , Composição de Medicamentos , Sistemas de Liberação de Medicamentos , Humanos , Concentração de Íons de Hidrogênio , Insulina/química , Nanopartículas , Polifosfatos/química
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