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1.
Microb Ecol ; 72(2): 295-304, 2016 08.
Artigo em Inglês | MEDLINE | ID: mdl-27147245

RESUMO

High amounts of driftwood sail across the oceans and provide habitat for organisms tolerating the rough and saline environment. Fungi have adapted to the extremely cold and saline conditions which driftwood faces in the high north. For the first time, we applied high-throughput sequencing to fungi residing in driftwood to reveal their taxonomic richness, community composition, and ecology in the North Atlantic. Using pyrosequencing of ITS2 amplicons obtained from 49 marine logs, we found 807 fungal operational taxonomic units (OTUs) based on clustering at 97 % sequence similarity cut-off level. The phylum Ascomycota comprised 74 % of the OTUs and 20 % belonged to Basidiomycota. The richness of basidiomycetes decreased with prolonged submersion in the sea, supporting the general view of ascomycetes being more extremotolerant. However, more than one fourth of the fungal OTUs remained unassigned to any fungal class, emphasising the need for better DNA reference data from the marine habitat. Different fungal communities were detected in coniferous and deciduous logs. Our results highlight that driftwood hosts a considerably higher fungal diversity than currently known. The driftwood fungal community is not a terrestrial relic but a speciose assemblage of fungi adapted to the stressful marine environment and different kinds of wooden substrates found in it.


Assuntos
Ascomicetos/classificação , Basidiomycota/classificação , Microbiologia da Água , Madeira/microbiologia , Adaptação Fisiológica , Ascomicetos/isolamento & purificação , Basidiomycota/isolamento & purificação , Biodiversidade , Biologia Computacional , DNA Fúngico/genética , Ecossistema , Análise Multivariada , Oceanos e Mares , Análise de Sequência de DNA , Especificidade da Espécie
2.
Mycologia ; 107(3): 607-18, 2015.
Artigo em Inglês | MEDLINE | ID: mdl-25661715

RESUMO

Glyphium encompasses species with erect, carbonaceous ligulate to dolabrate ascomata that are strongly laterally compressed and dehisce along a longitudinal slit. The five currently recognized members of the genus are separated primarily by whether the ascospores disassociate into part-spores within the ascus. Glyphium has traditionally been placed in Mytilinidiaceae (Mytilinidiales, Pleosporomycetidae, Dothideomycetes). The present study, based on freshly collected material of G. elatum and G. grisonense, was initiated to determine the phylogenetic placement of Glyphium. Phylogenies inferred from the analysis of sequences of six gene regions (nuLSU, nuSSU, mtSSU, TEF1, RPB1, RPB2) derived from six accessions indicate that Glyphium belongs to Patellariales (Pleosporomycetidae, Dothideomycetes). Our phylogenies also support the phylogenetic relationship of Patellaria and Hysteropatella within this order. The nomenclatural history of Glyphium is summarized and a key to species is provided.


Assuntos
Ascomicetos/classificação , Filogenia , Ascomicetos/genética , Ascomicetos/crescimento & desenvolvimento , Ascomicetos/isolamento & purificação , DNA Fúngico/genética , DNA Ribossômico/genética , Proteínas Fúngicas/genética , Dados de Sequência Molecular , RNA Polimerase II/genética , Esporos Fúngicos/classificação , Esporos Fúngicos/genética , Esporos Fúngicos/crescimento & desenvolvimento , Esporos Fúngicos/isolamento & purificação
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