Pesquisa | BVS Doenças Infecciosas e Parasitárias

1.

Recovering Gene Interactions from Single-Cell Data Using Data Diffusion.

van Dijk, David; Sharma, Roshan; Nainys, Juozas; Yim, Kristina; Kathail, Pooja; Carr, Ambrose J; Burdziak, Cassandra; Moon, Kevin R; Chaffer, Christine L; Pattabiraman, Diwakar; Bierie, Brian; Mazutis, Linas; Wolf, Guy; Krishnaswamy, Smita; Pe'er, Dana.

Cell ; 174(3): 716-729.e27, 2018 07 26.

Artigo em Inglês | MEDLINE | ID: mdl-29961576

2.

Structural and developmental principles of neuropil assembly in C. elegans.

Moyle, Mark W; Barnes, Kristopher M; Kuchroo, Manik; Gonopolskiy, Alex; Duncan, Leighton H; Sengupta, Titas; Shao, Lin; Guo, Min; Santella, Anthony; Christensen, Ryan; Kumar, Abhishek; Wu, Yicong; Moon, Kevin R; Wolf, Guy; Krishnaswamy, Smita; Bao, Zhirong; Shroff, Hari; Mohler, William A; Colón-Ramos, Daniel A.

Nature ; 591(7848): 99-104, 2021 03.

Artigo em Inglês | MEDLINE | ID: mdl-33627875

3.

Exploring single-cell data with deep multitasking neural networks.

Amodio, Matthew; van Dijk, David; Srinivasan, Krishnan; Chen, William S; Mohsen, Hussein; Moon, Kevin R; Campbell, Allison; Zhao, Yujiao; Wang, Xiaomei; Venkataswamy, Manjunatha; Desai, Anita; Ravi, V; Kumar, Priti; Montgomery, Ruth; Wolf, Guy; Krishnaswamy, Smita.

Nat Methods ; 16(11): 1139-1145, 2019 11.

Artigo em Inglês | MEDLINE | ID: mdl-31591579

4.

Dissecting alterations in human CD8+ T cells with aging by high-dimensional single cell mass cytometry.

Shin, Min Sun; Yim, Kristina; Moon, Kevin; Park, Hong-Jai; Mohanty, Subhasis; Kim, Joseph W; Montgomery, Ruth R; Shaw, Albert C; Krishnaswamy, Smita; Kang, Insoo.

Clin Immunol ; 200: 24-30, 2019 03.

Artigo em Inglês | MEDLINE | ID: mdl-30659916

5.

Ensemble Estimation of Information Divergence .

Moon, Kevin R; Sricharan, Kumar; Greenewald, Kristjan; Hero, Alfred O.

Entropy (Basel) ; 20(8)2018 Jul 27.

Artigo em Inglês | MEDLINE | ID: mdl-33265649

6.

Gaining Biological Insights through Supervised Data Visualization.

Rhodes, Jake S; Aumon, Adrien; Morin, Sacha; Girard, Marc; Larochelle, Catherine; Brunet-Ratnasingham, Elsa; Pagliuzza, Amélie; Marchitto, Lorie; Zhang, Wei; Cutler, Adele; Grand'Maison, Francois; Zhou, Anhong; Finzi, Andrés; Chomont, Nicolas; Kaufmann, Daniel E; Zandee, Stephanie; Prat, Alexandre; Wolf, Guy; Moon, Kevin R.

bioRxiv ; 2024 Jan 21.

Artigo em Inglês | MEDLINE | ID: mdl-38293135

7.

Sustained IFN signaling is associated with delayed development of SARS-CoV-2-specific immunity.

Brunet-Ratnasingham, Elsa; Morin, Sacha; Randolph, Haley E; Labrecque, Marjorie; Bélair, Justin; Lima-Barbosa, Raphaël; Pagliuzza, Amélie; Marchitto, Lorie; Hultström, Michael; Niessl, Julia; Cloutier, Rose; Sreng Flores, Alina M; Brassard, Nathalie; Benlarbi, Mehdi; Prévost, Jérémie; Ding, Shilei; Anand, Sai Priya; Sannier, Gérémy; Marks, Amanda; Wågsäter, Dick; Bareke, Eric; Zeberg, Hugo; Lipcsey, Miklos; Frithiof, Robert; Larsson, Anders; Zhou, Sirui; Nakanishi, Tomoko; Morrison, David; Vezina, Dani; Bourassa, Catherine; Gendron-Lepage, Gabrielle; Medjahed, Halima; Point, Floriane; Richard, Jonathan; Larochelle, Catherine; Prat, Alexandre; Cunningham, Janet L; Arbour, Nathalie; Durand, Madeleine; Richards, J Brent; Moon, Kevin; Chomont, Nicolas; Finzi, Andrés; Tétreault, Martine; Barreiro, Luis; Wolf, Guy; Kaufmann, Daniel E.

Nat Commun ; 15(1): 4177, 2024 May 16.

Artigo em Inglês | MEDLINE | ID: mdl-38755196

8.

Geometry- and Accuracy-Preserving Random Forest Proximities.

Rhodes, Jake S; Cutler, Adele; Moon, Kevin R.

IEEE Trans Pattern Anal Mach Intell ; 45(9): 10947-10959, 2023 Sep.

Artigo em Inglês | MEDLINE | ID: mdl-37015125

9.

Optimizing health and nutrition status of migrant construction workers consuming multiple micronutrient fortified rice in Singapore.

Hannes, Femke; Moon, Kevin; Moench Pfanner, Regina.

PLoS One ; 18(6): e0285708, 2023.

Artigo em Inglês | MEDLINE | ID: mdl-37262034

10.

Geometry Regularized Autoencoders.

Duque, Andres F; Morin, Sacha; Wolf, Guy; Moon, Kevin R.

IEEE Trans Pattern Anal Mach Intell ; 45(6): 7381-7394, 2023 Jun.

Artigo em Inglês | MEDLINE | ID: mdl-36374884

11.

Imaging of PD-L1 in single cancer cells by SERS-based hyperspectral analysis.

Zhang, Wei; Rhodes, Jake S; Moon, Kevin R; Knudsen, Beatrice S; Nokolova, Linda; Zhou, Anhong.

Biomed Opt Express ; 11(11): 6197-6210, 2020 Nov 01.

Artigo em Inglês | MEDLINE | ID: mdl-33282484

12.

Label-free discrimination and quantitative analysis of oxidative stress induced cytotoxicity and potential protection of antioxidants using Raman micro-spectroscopy and machine learning.

Zhang, Wei; Rhodes, Jake S; Garg, Ankit; Takemoto, Jon Y; Qi, Xiaojun; Harihar, Sitaram; Tom Chang, Cheng-Wei; Moon, Kevin R; Zhou, Anhong.

Anal Chim Acta ; 1128: 221-230, 2020 Sep 01.

Artigo em Inglês | MEDLINE | ID: mdl-32825906

13.

Author Correction: Visualizing structure and transitions in high-dimensional biological data.

Moon, Kevin R; van Dijk, David; Wang, Zheng; Gigante, Scott; Burkhardt, Daniel B; Chen, William S; Yim, Kristina; van den Elzen, Antonia; Hirn, Matthew J; Coifman, Ronald R; Ivanova, Natalia B; Wolf, Guy; Krishnaswamy, Smita.

Nat Biotechnol ; 38(1): 108, 2020 Jan.

Artigo em Inglês | MEDLINE | ID: mdl-31896828

14.

Single cell immune profiling of dengue virus patients reveals intact immune responses to Zika virus with enrichment of innate immune signatures.

Zhao, Yujiao; Amodio, Matthew; Vander Wyk, Brent; Gerritsen, Bram; Kumar, Mahesh M; van Dijk, David; Moon, Kevin; Wang, Xiaomei; Malawista, Anna; Richards, Monique M; Cahill, Megan E; Desai, Anita; Sivadasan, Jayasree; Venkataswamy, Manjunatha M; Ravi, Vasanthapuram; Fikrig, Erol; Kumar, Priti; Kleinstein, Steven H; Krishnaswamy, Smita; Montgomery, Ruth R.

PLoS Negl Trop Dis ; 14(3): e0008112, 2020 03.

Artigo em Inglês | MEDLINE | ID: mdl-32150565

15.

Coarse Graining of Data via Inhomogeneous Diffusion Condensation.

Brugnone, Nathan; Gonopolskiy, Alex; Moyle, Mark W; Kuchroo, Manik; van Dijk, David; Moon, Kevin R; Colon-Ramos, Daniel; Wolf, Guy; Hirn, Matthew J; Krishnaswamy, Smita.

Proc IEEE Int Conf Big Data ; 2019: 2624-2633, 2019 Dec.

Artigo em Inglês | MEDLINE | ID: mdl-32747879

16.

Visualizing structure and transitions in high-dimensional biological data.

Moon, Kevin R; van Dijk, David; Wang, Zheng; Gigante, Scott; Burkhardt, Daniel B; Chen, William S; Yim, Kristina; Elzen, Antonia van den; Hirn, Matthew J; Coifman, Ronald R; Ivanova, Natalia B; Wolf, Guy; Krishnaswamy, Smita.

Nat Biotechnol ; 37(12): 1482-1492, 2019 12.

Artigo em Inglês | MEDLINE | ID: mdl-31796933

17.

THE INTRINSIC VALUE OF HFO FEATURES AS A BIOMARKER OF EPILEPTIC ACTIVITY.

Gliske, Stephen V; Stacey, William C; Moon, Kevin R; Hero, Alfred O.

Proc IEEE Int Conf Acoust Speech Signal Process ; 2016: 6290-6294, 2016 Mar.

Artigo em Inglês | MEDLINE | ID: mdl-27453693

18.

Total building commissioning.

Moon, Kevin.

Health Estate ; 61(5): 25-7, 2007 May.

Artigo em Inglês | MEDLINE | ID: mdl-17549941

19.

Mandating sustainability in Australian hospitals.

McGain, Forbes; Blashki, Grant A; Moon, Kevin P; Armstrong, Fiona M.

Med J Aust ; 190(12): 719-20, 2009 Jun 15.

Artigo em Inglês | MEDLINE | ID: mdl-19527218

20.

Integrated approach advocated for managing risk.