Pesquisa | BVS Doenças Infecciosas e Parasitárias

1.

The impact of AI on research.

Weigel, Aubrey; Caldas, Carlos; Meyer, Axel; Morris, Samantha A.

Cell ; 185(15): 2621-2622, 2022 07 21.

Artigo em Inglês | MEDLINE | ID: mdl-35868265

2.

Self-Reporting Transposons Enable Simultaneous Readout of Gene Expression and Transcription Factor Binding in Single Cells.

Moudgil, Arnav; Wilkinson, Michael N; Chen, Xuhua; He, June; Cammack, Alexander J; Vasek, Michael J; Lagunas, Tomás; Qi, Zongtai; Lalli, Matthew A; Guo, Chuner; Morris, Samantha A; Dougherty, Joseph D; Mitra, Robi D.

Cell ; 182(4): 992-1008.e21, 2020 08 20.

Artigo em Inglês | MEDLINE | ID: mdl-32710817

3.

CellNet: network biology applied to stem cell engineering.

Cahan, Patrick; Li, Hu; Morris, Samantha A; Lummertz da Rocha, Edroaldo; Daley, George Q; Collins, James J.

Cell ; 158(4): 903-915, 2014 Aug 14.

Artigo em Inglês | MEDLINE | ID: mdl-25126793

4.

Dissecting engineered cell types and enhancing cell fate conversion via CellNet.

Morris, Samantha A; Cahan, Patrick; Li, Hu; Zhao, Anna M; San Roman, Adrianna K; Shivdasani, Ramesh A; Collins, James J; Daley, George Q.

Cell ; 158(4): 889-902, 2014 Aug 14.

Artigo em Inglês | MEDLINE | ID: mdl-25126792

5.

Dissecting cell identity via network inference and in silico gene perturbation.

Kamimoto, Kenji; Stringa, Blerta; Hoffmann, Christy M; Jindal, Kunal; Solnica-Krezel, Lilianna; Morris, Samantha A.

Nature ; 614(7949): 742-751, 2023 02.

Artigo em Inglês | MEDLINE | ID: mdl-36755098

6.

Stem cell dynamics and cellular heterogeneity across lineage subtypes of castrate resistant prostate cancer.

Beshiri, Michael L; Capaldo, Brian J; Lake, Ross; Ku, Anson T; Burner, Danielle; Tice, Caitlin M; Tran, Crystal; Kostas, Julianna; Alilin, Aian Neil; Yin, Juan Juan; Agarwal, Supreet; Morris, Samantha A; Karzai, Fatima H; Lotan, Tamara L; Dahut, William L; Sowalsky, Adam G; Kelly, Kathleen.

Stem Cells ; 2024 Apr 02.

Artigo em Inglês | MEDLINE | ID: mdl-38563224

7.

Single-cell mapping of lineage and identity in direct reprogramming.

Biddy, Brent A; Kong, Wenjun; Kamimoto, Kenji; Guo, Chuner; Waye, Sarah E; Sun, Tao; Morris, Samantha A.

Nature ; 564(7735): 219-224, 2018 12.

Artigo em Inglês | MEDLINE | ID: mdl-30518857

8.

The evolving concept of cell identity in the single cell era.

Morris, Samantha A.

Development ; 146(12)2019 06 27.

Artigo em Inglês | MEDLINE | ID: mdl-31249002

9.

In preprints: the fast-paced field of single-cell lineage tracing.

Rodriguez-Fraticelli, Alejo; Morris, Samantha A.

Development ; 149(11)2022 06 01.

Artigo em Inglês | MEDLINE | ID: mdl-35686642

10.

New dual-channel system records lineage in high definition.

Jindal, Kunal; VanHorn, Sadie; Morris, Samantha A.

Nat Methods ; 19(1): 38-39, 2022 01.

Artigo em Inglês | MEDLINE | ID: mdl-34969983

11.

Cell identity reprogrammed.

Morris, Samantha A.

Nature ; 575(7781): 44-45, 2019 11.

Artigo em Inglês | MEDLINE | ID: mdl-31686043

12.

Pinpointing a spatial address for RNA profiles in tissues.

Morris, Samantha A.

Nature ; 569(7755): 197-199, 2019 05.

Artigo em Inglês | MEDLINE | ID: mdl-31053836

13.

Direct lineage reprogramming via pioneer factors; a detour through developmental gene regulatory networks.

Morris, Samantha A.

Development ; 143(15): 2696-705, 2016 08 01.

Artigo em Inglês | MEDLINE | ID: mdl-27486230

14.

Making a firm decision: multifaceted regulation of cell fate in the early mouse embryo.

Zernicka-Goetz, Magdalena; Morris, Samantha A; Bruce, Alexander W.

Nat Rev Genet ; 10(7): 467-77, 2009 Jul.

Artigo em Inglês | MEDLINE | ID: mdl-19536196

15.

Zcchc11 uridylates mature miRNAs to enhance neonatal IGF-1 expression, growth, and survival.

Jones, Matthew R; Blahna, Matthew T; Kozlowski, Elyse; Matsuura, Kori Y; Ferrari, Joseph D; Morris, Samantha A; Powers, John T; Daley, George Q; Quinton, Lee J; Mizgerd, Joseph P.

PLoS Genet ; 8(11): e1003105, 2012.

Artigo em Inglês | MEDLINE | ID: mdl-23209448

16.

Origin and formation of the first two distinct cell types of the inner cell mass in the mouse embryo.

Morris, Samantha A; Teo, Roy T Y; Li, Huiliang; Robson, Paul; Glover, David M; Zernicka-Goetz, Magdalena.

Proc Natl Acad Sci U S A ; 107(14): 6364-9, 2010 Apr 06.

Artigo em Inglês | MEDLINE | ID: mdl-20308546

17.

Gene regulatory network reconfiguration in direct lineage reprogramming.

Kamimoto, Kenji; Adil, Mohd Tayyab; Jindal, Kunal; Hoffmann, Christy M; Kong, Wenjun; Yang, Xue; Morris, Samantha A.

Stem Cell Reports ; 18(1): 97-112, 2023 01 10.

Artigo em Inglês | MEDLINE | ID: mdl-36584685

18.

Single-cell lineage tracing reveals hierarchy and mechanism of adipocyte precursor maturation.

Rivera-Gonzalez, Guillermo C; Butka, Emily G; Gonzalez, Carolynn E; Kong, Wenjun; Jindal, Kunal; Morris, Samantha A.

bioRxiv ; 2023 Jun 03.

Artigo em Inglês | MEDLINE | ID: mdl-37398135

19.

Single-cell lineage capture across genomic modalities with CellTag-multi reveals fate-specific gene regulatory changes.

Jindal, Kunal; Adil, Mohd Tayyab; Yamaguchi, Naoto; Yang, Xue; Wang, Helen C; Kamimoto, Kenji; Rivera-Gonzalez, Guillermo C; Morris, Samantha A.

Nat Biotechnol ; 2023 Sep 25.

Artigo em Inglês | MEDLINE | ID: mdl-37749269

20.

Defining cardiac functional recovery in end-stage heart failure at single-cell resolution.

Amrute, Junedh M; Lai, Lulu; Ma, Pan; Koenig, Andrew L; Kamimoto, Kenji; Bredemeyer, Andrea; Shankar, Thirupura S; Kuppe, Christoph; Kadyrov, Farid F; Schulte, Linda J; Stoutenburg, Dylan; Kopecky, Benjamin J; Navankasattusas, Sutip; Visker, Joseph; Morris, Samantha A; Kramann, Rafael; Leuschner, Florian; Mann, Douglas L; Drakos, Stavros G; Lavine, Kory J.

Nat Cardiovasc Res ; 2(4): 399-416, 2023 Apr.

Artigo em Inglês | MEDLINE | ID: mdl-37583573

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The impact of AI on research.

Self-Reporting Transposons Enable Simultaneous Readout of Gene Expression and Transcription Factor Binding in Single Cells.

CellNet: network biology applied to stem cell engineering.

Dissecting engineered cell types and enhancing cell fate conversion via CellNet.

Dissecting cell identity via network inference and in silico gene perturbation.

Stem cell dynamics and cellular heterogeneity across lineage subtypes of castrate resistant prostate cancer.

Single-cell mapping of lineage and identity in direct reprogramming.

The evolving concept of cell identity in the single cell era.

In preprints: the fast-paced field of single-cell lineage tracing.

New dual-channel system records lineage in high definition.

Cell identity reprogrammed.

Pinpointing a spatial address for RNA profiles in tissues.

Direct lineage reprogramming via pioneer factors; a detour through developmental gene regulatory networks.

Making a firm decision: multifaceted regulation of cell fate in the early mouse embryo.

Zcchc11 uridylates mature miRNAs to enhance neonatal IGF-1 expression, growth, and survival.

Origin and formation of the first two distinct cell types of the inner cell mass in the mouse embryo.

Gene regulatory network reconfiguration in direct lineage reprogramming.

Single-cell lineage tracing reveals hierarchy and mechanism of adipocyte precursor maturation.

Single-cell lineage capture across genomic modalities with CellTag-multi reveals fate-specific gene regulatory changes.

Defining cardiac functional recovery in end-stage heart failure at single-cell resolution.