Detalhe da pesquisa
1.
Systems-Wide Prediction of Enzyme Promiscuity Reveals a New Underground Alternative Route for Pyridoxal 5'-Phosphate Production in E. coli.
PLoS Comput Biol
; 12(1): e1004705, 2016 Jan.
Artigo
em Inglês
| MEDLINE | ID: mdl-26821166
2.
A novel nutritional predictor links microbial fastidiousness with lowered ubiquity, growth rate, and cooperativeness.
PLoS Comput Biol
; 10(7): e1003726, 2014 Jul.
Artigo
em Inglês
| MEDLINE | ID: mdl-25033033
3.
Reconciliation of genome-scale metabolic reconstructions for comparative systems analysis.
PLoS Comput Biol
; 7(3): e1001116, 2011 Mar.
Artigo
em Inglês
| MEDLINE | ID: mdl-21483480
4.
Metabolic network analysis of Pseudomonas aeruginosa during chronic cystic fibrosis lung infection.
J Bacteriol
; 192(20): 5534-48, 2010 Oct.
Artigo
em Inglês
| MEDLINE | ID: mdl-20709898
5.
Applications of genome-scale metabolic reconstructions.
Mol Syst Biol
; 5: 320, 2009.
Artigo
em Inglês
| MEDLINE | ID: mdl-19888215
6.
Genome-scale reconstruction and analysis of the Pseudomonas putida KT2440 metabolic network facilitates applications in biotechnology.
PLoS Comput Biol
; 4(10): e1000210, 2008 Oct.
Artigo
em Inglês
| MEDLINE | ID: mdl-18974823
7.
Flux balance analysis: interrogating genome-scale metabolic networks.
Methods Mol Biol
; 500: 61-80, 2009.
Artigo
em Inglês
| MEDLINE | ID: mdl-19399432
8.
Genome-scale metabolic network analysis of the opportunistic pathogen Pseudomonas aeruginosa PAO1.
J Bacteriol
; 190(8): 2790-803, 2008 Apr.
Artigo
em Inglês
| MEDLINE | ID: mdl-18192387
9.
Predicting biological system objectives de novo from internal state measurements.
BMC Bioinformatics
; 9: 43, 2008 Jan 24.
Artigo
em Inglês
| MEDLINE | ID: mdl-18218092
10.
Metabolic Network Prediction of Drug Side Effects.
Cell Syst
; 2(3): 209-13, 2016 Mar 23.
Artigo
em Inglês
| MEDLINE | ID: mdl-27135366
11.
Harnessing the landscape of microbial culture media to predict new organism-media pairings.
Nat Commun
; 6: 8493, 2015 Oct 13.
Artigo
em Inglês
| MEDLINE | ID: mdl-26460590
12.
Maximal sum of metabolic exchange fluxes outperforms biomass yield as a predictor of growth rate of microorganisms.
PLoS One
; 9(5): e98372, 2014.
Artigo
em Inglês
| MEDLINE | ID: mdl-24866123
13.
Metabolically re-modeling the drug pipeline.
Curr Opin Pharmacol
; 13(5): 778-85, 2013 Oct.
Artigo
em Inglês
| MEDLINE | ID: mdl-23731523
14.
Systems analysis of small signaling modules relevant to eight human diseases.
Ann Biomed Eng
; 39(2): 621-35, 2011 Feb.
Artigo
em Inglês
| MEDLINE | ID: mdl-21132372
15.
Genome-scale modeling and human disease: an overview.
Front Physiol
; 5: 527, 2014.
Artigo
em Inglês
| MEDLINE | ID: mdl-25667572
16.
Multiscale computational analysis of Xenopus laevis morphogenesis reveals key insights of systems-level behavior.
BMC Syst Biol
; 1: 46, 2007 Oct 22.
Artigo
em Inglês
| MEDLINE | ID: mdl-17953751