Developmental evolution of the distal ankle in the dinosaur-bird transition.

The adult ankle of early reptiles had five distal tarsal (dt) bones, but in Dinosauria, these were reduced to only two: dt3 and dt4, articulated to metatarsals (mt) mt3 and mt4. Birds have a single distal tarsal ossification center that fuses to the proximal metatarsals to form a new adult skeletal structure: the composite tarsometatarsus. This ossification center develops within a single large embryonic cartilage, but it is unclear if this cartilage results from fusion of earlier cartilages. We studied embryos in species from four different bird orders, an alligatorid, and an iguanid. In all embryos, cartilages dt2, dt3, and dt4 are formed. In the alligatorid and the iguanid, dt2 failed to ossify: only dt3 and dt4 develop into adult bones. In birds, dt2, dt3, and dt4 fuse to form the large distal tarsal cartilage; the ossification center then develops above mt3, in cartilage presumably derived from dt3. During the entire dinosaur-bird transition, a dt2 embryonic cartilage was always formed, as inferred from the embryology of extant birds and crocodilians. We propose that in the evolution of the avian ankle, fusion of cartilages dt3 and dt2 allowed ossification from dt3 to progress into dt2, which began to contribute bone medially, while fusion of dt3 to dt4 enabled the evolutionary loss of the dt4 ossification center. As a result, a single ossification center expands into a plate-like unit covering the proximal ends of the metatarsals, that is key to the development of an integrated tarsometatarsus.

Development and characterization of 22 polymorphic microsatellites of the Andean frog Telmatobius chusmisensis (Anura, Telmatobius) and cross amplification in seven Chilean species of the genus.

The genus Telmatobius Wiegmann, 1834 is composed of a wide variety of species and is one of the most diverse native components of the high-altitude Andean environments. The species of the genus present in Chile are considered as endangered, critically endangered or data deficient. We isolated and evaluated 44 microsatellites in 80 individuals of 8 species of Telmatobius present in Chile, obtaining 22 polymorphic microsatellite loci for Telmatobius chusmisensis. The cross-amplification test was successful in all other species tested. For the first time, microsatellite markers are described for Telmatobius. The description of these primers will be useful for further genetic studies for T. chusmisensis and other species of the same genus; allowing further analyses of population structuring, dispersal patterns, recent demographic history and population effective size. This information is also significant to undertake conservation actions for the species of the genus Telmatobius, since most species have conservation issues.

Evolution and Conservation on Top of the World: Phylogeography of the Marbled Water Frog (Telmatobius marmoratus Species Complex; Anura, Telmatobiidae) in Protected Areas of Chile.

The Andean Altiplano has served as a complex setting throughout its history, driving dynamic processes of diversification in several taxa. We investigated phylogeographic processes in the Telmatobius marmoratus species complex occurring in this region by studying the geographic patterns of genetic variability, genealogies, and historical migration, using the cytochrome b (cyt-b) gene as a marker. DNA sequences from Telmatobius gigas and Telmatobius culeus, Bolivian species with an uncertain taxonomic status, were also included. Additionally, we evaluated the phylogenetic diversity (PD) represented within Chilean protected areas and the complementary contribution from unprotected populations. Phylogenetic reconstructions from 148 cyt-b sequences revealed 4 main clades, one of which corresponded to T. culeus. T. gigas was part of T. marmoratus clade indicating paraphyletic relationships. Haplotypes from Chilean and Bolivian sites were not reciprocally monophyletic. Geographic distribution of lineages, spatial Bayesian analysis, and migration patterns indicated that T. marmoratus displays a weaker geographic structure than expected based on habitat distribution and physiological requirements. Demographic and statistical phylogeography analyses pointed out to a scenario of recent population expansion and high connectivity events of a more recent age than the post Last Glacial Maximum, probably associated to more humid events in Altiplano. PD of T. marmoratus populations within protected areas represents 55.6% of the total estimated PD. The unprotected populations that would contribute the most to PD are Caquena and Quebe (21%). Recent evolutionary processes and paleoclimatic changes, potentially driving shifts in habitat connectivity levels and population sizes, could explain the phylogeographic patterns recovered herein.

Pattern of genetic differentiation of an incipient speciation process: The case of the high Andean killifish Orestias.

During the Pleistocene and Holocene, the southwest Andean Altiplano (17°-22°S) was affected by repeated fluctuations in water levels, high volcanic activity and major tectonic movements. In the early Holocene the humid Tauca phase shifted to the arid conditions that have lasted until the present, producing endorheic rivers, lakes, lagoons and wetlands. The endemic fish Orestias (Cyprinodontidae) represents a good model to observe the genetic differentiation that characterizes an incipient speciation process in allopatry since the morphospecies described inhabit a restricted geographic area, with present habitat fragmentation. The genetic diversity and population structure of four endemic morphospecies of Orestias (Cyprinodontidae) found in the Lauca National Park (LNP) analyzed with mitochondrial markers (Control Region) and eight microsatellites, revealed the existence of genetic groups that matches the fragmentation of these systems. High values of genetic and phylogeographic differentiation indices were observed between Chungará Lake and Piacota lagoon. The group composed of the Lauca River, Copapujo and Chuviri wetlands sampling sites showed a clear signal of expansion, with a star-like haplotype network. Levels of genetic differentiation were lower than in Chungará and Piacota, suggesting that these localities would have differentiated after the bottlenecks linked to the collapse of Parinacota volcano. The Parinacota sample showed a population signal that differed from the other localities revealing greater genetic diversity and a disperse network, presenting haplotypes shared with other LNP localities. A mixing pattern of the different genetic groups was evident using the microsatellite markers. The chronology of the vicariance events in LNP may indicate that the partition process of the Orestias populations was gradual. Considering this, and in view of the genetic results, we may conclude that the morphospecies from LNP are populations in ongoing differentiation process.

Correction: Pattern of genetic differentiation of an incipient speciation process: The case of the high Andean killifish Orestias.

[This corrects the article DOI: 10.1371/journal.pone.0170380.].

The taxonomic status of two Telmatobius frog species (Anura: Telmatobiidae) from the western Andean slopes of northernmost Chile.

On the basis of molecular and morphological evidence, we evaluated the taxonomic identity of two species of Andean frogs of the genus Telmatobius: Telmatobius pefauri and T. zapahuirensis, present in the western Andean slopes at the northern extreme of Chile. We also investigated the taxonomic assignment of five populations of Telmatobius recently discovered around the type localities of these two species. The results indicate that T. pefauri inhabits, not only Murmuntani its type locality, but also the montane localities of Belén, Copaquilla, Lupica, Saxamar and Socoroma. Our study also shows that T. pefauri and T. zapahuirensis are the same taxon. Therefore, Telmatobius zapahuirensis Veloso, Sallaberry, Navarro, Iturra, Valencia, Penna & Díaz, 1982 would be a subjective junior synonym of Telmatobius pefauri Veloso & Trueb, 1976.

Comparison of the oxygen diffusing capacity of the picui ground dove (Columbina picui) with other doves of Chile / Comparación de la capacidad de difusión de oxígeno de la tórtola picus (Columbina picui) con otras tórtolas de Chile

We studied the respiratory surface density and the thickness of the air-blood barrier in the Picui Ground Dove (Columbina picui), and compared it with Eared Dove (Zenaida auriculata) and Blacked-winged Ground Dove (Metropelia melanoptera), two larger species. As expected, Columbina picui BMR and VO2max showed higher values than those of the larger species according to the expected for their body size. The respiratory surface density and the thickness of the blood-air barrier were not different among the different species of doves. However C. picui showed an anatomical diffusion factor lower than M. melanoptera and Z. auriculata. Picui Ground Dove had low values of oxygen diffusion capacity, such as cursorial birds. A differential oxygen partial pressure of 7.5 Kpa, an usual value at sea level, it can hardly meet their maximal energy requirements and it means that Picui Ground Dove, would have serious limitations to live at high altitudes, which is consistent with the observation that this species inhabits lowlands and at the foot hills of the Andes.

Se estudió la densidad de superficie respiratoria y el espesor de la barrera sangre-aire en la Tortolita cuyana (Columbina picui), y se comparó con la Tórtola cordillerana (Metropelia melanoptera) y la Tórtola (Zenaida auriculata), dos especies más grandes. Como era de esperar, en C. picui el metabolismo basal y el metabolismo máximo fueron más altos que los de especies más grandes, pero de acuerdo a lo esperado para el tamaño corporal. La densidad de la superficie respiratoria y el espesor de la barrera sangre-aire no fueron diferentes entre las diferentes especies de tórtolas. Sin embargo C. picui mostró un factor de difusión anatómica inferior a M. melanoptera y Z. auriculata. C. picui tuvo valores bajos de capacidad de difusión de oxígeno, como las aves cursoriales. A una diferencia de presión parcial de oxígeno de 7,5 Kpa, un valor habitual a nivel del mar, apenas podría satisfacer sus necesidades de energía máxima y esto significa que tendría serias limitaciones para vivir a gran altura, lo cual es coherente con la observación de que esta especie habita en las tierras bajas y en la zona precordillerana de los Andes.