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1.
Proc Natl Acad Sci U S A ; 121(9): e2315132121, 2024 Feb 27.
Artigo em Inglês | MEDLINE | ID: mdl-38377199

RESUMO

The cooperative action of the subunits in oligomeric receptors enables fine-tuning of receptor activation, as demonstrated for the regulation of voltage-activated HCN pacemaker ion channels by relating cAMP binding to channel activation in ensemble signals. HCN channels generate electric rhythmicity in specialized brain neurons and cardiomyocytes. There is conflicting evidence on whether binding cooperativity does exist independent of channel activation or not, as recently reported for detergent-solubilized receptors positioned in zero-mode waveguides. Here, we show positive cooperativity in ligand binding to closed HCN2 channels in native cell membranes by following the binding of individual fluorescence-labeled cAMP molecules. Kinetic modeling reveals that the affinity of the still empty binding sites rises with increased degree of occupation and that the transition of the channel to a flip state is promoted accordingly. We conclude that ligand binding to the subunits in closed HCN2 channels not pre-activated by voltage is already cooperative. Hence, cooperativity is not causally linked to channel activation by voltage. Our analysis also shows that single-molecule binding measurements at equilibrium can quantify cooperativity in ligand binding to receptors in native membranes.


Assuntos
Canais Disparados por Nucleotídeos Cíclicos Ativados por Hiperpolarização , Ativação do Canal Iônico , Ligantes , Canais Disparados por Nucleotídeos Cíclicos Ativados por Hiperpolarização/metabolismo , Ativação do Canal Iônico/fisiologia , AMP Cíclico/metabolismo , Fenômenos Biofísicos , Canais de Cátion Regulados por Nucleotídeos Cíclicos/metabolismo
2.
J Bacteriol ; 206(2): e0036323, 2024 02 22.
Artigo em Inglês | MEDLINE | ID: mdl-38305193

RESUMO

Methanogenesis is a key step during anaerobic biomass degradation. Methanogenic archaea (methanogens) are the only organisms coupling methanogenic substrate conversion to energy conservation. The range of substrates utilized by methanogens is limited, with acetate and H2+CO2 being the ecologically most relevant. The only single methanogenic energy substrate containing more carbon-carbon bonds than acetate is pyruvate. Only the aggregate-forming, freshwater methanogen Methanosarcina barkeri Fusaro was shown to grow on this compound. Here, the pyruvate-utilizing capabilities of the single-celled, marine Methanosarcina acetivorans were addressed. Robust pyruvate-dependent, methanogenic, growth could be established by omitting CO2 from the growth medium. Growth rates which were independent of the pyruvate concentration indicated that M. acetivorans actively translocates pyruvate across the cytoplasmic membrane. When 2-bromoethanesulfonate (BES) inhibited methanogenesis to more than 99%, pyruvate-dependent growth was acetogenic and sustained. However, when methanogenesis was completely inhibited M. acetivorans did not grow on pyruvate. Analysis of metabolites showed that acetogenesis is used by BES-inhibited M. acetivorans as a sink for electrons derived from pyruvate oxidation and that other, thus far unidentified, metabolites are produced.IMPORTANCEThe known range of methanogenic growth substrates is very limited and M. acetivorans is only the second methanogenic species for which growth on pyruvate is demonstrated. Besides some commonalities, analysis of M. acetivorans highlights differences in pyruvate metabolism among Methanosarcina species. The observation that M. acetivorans probably imports pyruvate actively indicates that the capabilities for heterotrophic catabolism in methanogens may be underestimated. The mostly acetogenic growth of M. acetivorans on pyruvate with concomitant inhibition of methanogenesis confirms that energy conservation of methanogenic archaea can be independent of methane formation.


Assuntos
Ácidos Alcanossulfônicos , Methanosarcina , Ácido Pirúvico , Methanosarcina/genética , Methanosarcina/metabolismo , Ácido Pirúvico/metabolismo , Metano/metabolismo , Dióxido de Carbono/metabolismo , Acetatos/metabolismo , Carbono/metabolismo
3.
Biochem Biophys Res Commun ; 738: 150560, 2024 Aug 15.
Artigo em Inglês | MEDLINE | ID: mdl-39159549

RESUMO

Voltage-gated potassium (Kv) channels are integral to cellular excitability, impacting the resting membrane potential, repolarization, and shaping action potentials in neurons and cardiac myocytes. Structurally, Kv channels are homo or heterotetramers comprising four α-subunits, each with six transmembrane segments (S1-S6). Silent Kv (KvS), includes Kv5.1, Kv6.1-6.4, Kv8.1-8.2, and Kv9.1-9.3, they do not form functional channels on their own but modulate the properties of heteromeric channels. Recent studies have identified the Kv6.4 subunit as a significant modulator within heteromeric channels, such as Kv2.16.4. The Kv2.16.4 heteromer exhibits altered biophysical properties, including a shift in voltage-dependent inactivation and a complex activation. Current genetic studies in migraine patients have revealed a single missense mutation in the Kv6.4 gene. The single missense mutation, L360P is in the highly conserved S4-S5 linker region. This study aims to demonstrate the biophysical effects of the L360P mutation in Kv2.1 6.4 channels with a fixed 2:2 stoichiometry, using monomeric (Kv2.1/6.4) and tandem dimer (Kv2.1_6.4) configurations. Our findings suggest that the L360P mutation significantly impacts the function and regulation of Kv2.1/6.4 channels, providing insights into the molecular mechanisms underlying channel dysfunction in migraine pathology.

4.
Environ Sci Technol ; 58(5): 2282-2292, 2024 Feb 06.
Artigo em Inglês | MEDLINE | ID: mdl-38270080

RESUMO

Direct air capture (DAC) of CO2 has gained attention as a sustainable carbon source. One of the most promising technologies currently available is liquid solvent DAC (L-DAC), but the significant fraction of fossil CO2 in the output stream hinders its utilization in carbon-neutral fuels and chemicals. Fossil CO2 is generated and captured during the combustion of fuels to calcine carbonates, which is difficult to decarbonize due to the high temperatures required. Solar thermal energy can provide green high-temperature heat, but it flourishes in arid regions where environmental conditions are typically unfavorable for L-DAC. This study proposes a solar-powered L-DAC approach and develops a model to assess the influence of the location and plant capacity on capture costs. The performed life cycle assessment enables the comparison of technologies based on net CO2 removal, demonstrating that solar-powered L-DAC is not only more environmentally friendly but also more cost-effective than conventional L-DAC.


Assuntos
Dióxido de Carbono , Energia Solar , Custos e Análise de Custo , Carbono , Tecnologia
5.
Proc Natl Acad Sci U S A ; 118(30)2021 07 27.
Artigo em Inglês | MEDLINE | ID: mdl-34301910

RESUMO

Cyclic nucleotide-gated (CNG) ion channels of olfactory neurons are tetrameric membrane receptors that are composed of two A2 subunits, one A4 subunit, and one B1b subunit. Each subunit carries a cyclic nucleotide-binding domain in the carboxyl terminus, and the channels are activated by the binding of cyclic nucleotides. The mechanism of cooperative channel activation is still elusive. Using a complete set of engineered concatenated olfactory CNG channels, with all combinations of disabled binding sites and fit analyses with systems of allosteric models, the thermodynamics of microscopic cooperativity for ligand binding was subunit- and state-specifically quantified. We show, for the closed channel, that preoccupation of each of the single subunits increases the affinity of each other subunit with a Gibbs free energy (ΔΔG) of ∼-3.5 to ∼-5.5 kJ ⋅ mol-1, depending on the subunit type, with the only exception that a preoccupied opposite A2 subunit has no effect on the other A2 subunit. Preoccupation of two neighbor subunits of a given subunit causes the maximum affinity increase with ΔΔG of ∼-9.6 to ∼-9.9 kJ ⋅ mol-1 Surprisingly, triple preoccupation leads to fewer negative ΔΔG values for a given subunit as compared to double preoccupation. Channel opening increases the affinity of all subunits. The equilibrium constants of closed-open isomerizations systematically increase with progressive liganding. This work demonstrates, on the example of the heterotetrameric olfactory CNG channel, a strategy to derive detailed insights into the specific mutual control of the individual subunits in a multisubunit membrane receptor.


Assuntos
AMP Cíclico/metabolismo , GMP Cíclico/metabolismo , Canais de Cátion Regulados por Nucleotídeos Cíclicos/química , Canais de Cátion Regulados por Nucleotídeos Cíclicos/metabolismo , Ativação do Canal Iônico , Termodinâmica , Animais , Sítios de Ligação , Canais de Cátion Regulados por Nucleotídeos Cíclicos/genética , Ligantes , Oócitos/metabolismo , Conformação Proteica , Subunidades Proteicas , Xenopus laevis/crescimento & desenvolvimento , Xenopus laevis/metabolismo
6.
PLoS Comput Biol ; 18(8): e1010376, 2022 08.
Artigo em Inglês | MEDLINE | ID: mdl-35998156

RESUMO

Cyclic nucleotide-gated (CNG) ion channels of olfactory sensory neurons contain three types of homologue subunits, two CNGA2 subunits, one CNGA4 subunit and one CNGB1b subunit. Each subunit carries an intracellular cyclic nucleotide binding domain (CNBD) whose occupation by up to four cyclic nucleotides evokes channel activation. Thereby, the subunits interact in a cooperative fashion. Here we studied 16 concatamers with systematically disabled, but still functional, binding sites and quantified channel activation by systems of intimately coupled state models transferred to 4D hypercubes, thereby exploiting a weak voltage dependence of the channels. We provide the complete landscape of free energies for the complex activation process of heterotetrameric channels, including 32 binding steps, in both the closed and open channel, as well as 16 closed-open isomerizations. The binding steps are specific for the subunits and show pronounced positive cooperativity for the binding of the second and the third ligand. The energetics of the closed-open isomerizations were disassembled to elementary subunit promotion energies for channel opening, [Formula: see text], adding to the free energy of the closed-open isomerization of the empty channel, E0. The [Formula: see text] values are specific for the four subunits and presumably invariant for the specific patterns of liganding. In conclusion, subunit cooperativity is confined to the CNBD whereas the subunit promotion energies for channel opening are independent.


Assuntos
Canais de Cátion Regulados por Nucleotídeos Cíclicos , Neurônios Receptores Olfatórios , Canais de Cátion Regulados por Nucleotídeos Cíclicos/metabolismo , Ligantes , Nucleotídeos Cíclicos/metabolismo , Neurônios Receptores Olfatórios/metabolismo , Olfato
7.
Phys Chem Chem Phys ; 25(13): 9188-9197, 2023 Mar 29.
Artigo em Inglês | MEDLINE | ID: mdl-36919347

RESUMO

CaMnO3-δ-based perovskites find application in a variety of thermochemical cycles, e.g. oxygen partial pressure adjustment, chemical looping processes, and thermochemical energy storage. The applicability of these materials is governed by their thermodynamic and kinetic properties. Therefore, tunability of these properties is desirable to adapt the material to the required conditions. In this study, the effect of Sr content in Ca1-xSrxMnO3-δ on thermodynamics and kinetics is investigated by thermogravimetric analysis. The thermodynamics are measured in the temperature range of 873 K to 1473 K with oxygen partial pressures of 1 × 10-4 bar to 0.8 bar. The oxidation kinetics were characterized in the temperature range from 473 K to 673 K with oxygen partial pressures of 0.01 bar to 1 bar. The reduction kinetics were very rapid in the temperature range of 873 K to 1023 K, with the measured rates limited by the constraints of the measurement device. The results show that with increasing Sr content the structural changes of the material decrease the reduction enthalpy and the oxidation activation energy. This not only leads to a tunability of material properties, but can also be used to predict changes of these properties when only the structural changes are known.

8.
Angew Chem Int Ed Engl ; 62(32): e202218850, 2023 Aug 07.
Artigo em Inglês | MEDLINE | ID: mdl-36637348

RESUMO

Hydrogen (H2 ) produced from renewables will have a growing impact on the global energy dynamics towards sustainable and carbon-neutral standards. The share of green H2 is still too low to meet the net-zero target, while the demand for high-quality hydrogen continues to rise. These factors amplify the need for economically viable H2 generation technologies. The present article aims at evaluating the existing technologies for high-quality H2 production based on solar energy. Technologies such as water electrolysis, photoelectrochemical and solar thermochemical water splitting, liquid metal reactors and plasma conversion utilize solar power directly or indirectly (as carbon-neutral electrons) and are reviewed from the perspective of their current development level, technical limitations and future potential.

9.
Purinergic Signal ; 18(2): 177-191, 2022 06.
Artigo em Inglês | MEDLINE | ID: mdl-35188598

RESUMO

P2X receptors are trimeric nonselective cation channels gated by ATP. They assemble from seven distinct subunit isoforms as either homo- or heteromeric complexes and contain three extracellularly located binding sites for ATP. P2X receptors are expressed in nearly all tissues and are there involved in physiological processes like synaptic transmission, pain, and inflammation. Thus, they are a challenging pharmacological target. The determination of crystal and cryo-EM structures of several isoforms in the last decade in closed, open, and desensitized states has provided a firm basis for interpreting the huge amount of functional and biochemical data. Electrophysiological characterization in conjugation with optical approaches has generated significant insights into structure-function relationships of P2X receptors. This review focuses on novel optical and related approaches to better understand the conformational changes underlying the activation of these receptors.


Assuntos
Trifosfato de Adenosina , Ativação do Canal Iônico , Trifosfato de Adenosina/metabolismo , Ativação do Canal Iônico/fisiologia , Receptores Purinérgicos P2X/metabolismo
10.
Phys Chem Chem Phys ; 24(45): 27976-27988, 2022 Nov 23.
Artigo em Inglês | MEDLINE | ID: mdl-36373742

RESUMO

Perovskite oxides of the general formula ABO3-δ, with A and B being metal cations, present themselves in various crystal structures that originate from a distorted ideal cubic perovskite. Understanding how composition, temperature, atmosphere and reduction extent of these non-stoichiometric redox materials induce structural changes on an atomic, as well as macroscopic, level is crucial to transfer newly developed materials to industrial scale applications in the redox-based energy conversion sector. Herein, Ca1-xSrxMnO3-δ (x ∈ [0,0.2]) and its micro- and macroscopic structural changes at elevated temperatures and varying oxygen partial pressure are analyzed by means of in situ high temperature XRD, DSC and dilatometry. Results are expanded by room temperature XRD of compositions with higher Sr-content up to x = 0.4. By adjusting the Sr-content, the formed crystal structure can be governed and thermal expansion can be impacted beneficially in the context of future applications utilizing monolithic structures. Phase transitions from orthorhombic to cubic were found to shift from 900 °C to 830 °C under air and to even lower temperatures under 1% O2 atmosphere. Small amounts of Sr-content (5-10%) stabilize the macroscopic structural integrity by improving the reversibility of the cyclic thermal expansion and contraction in a 1% O2 atmosphere. However, at Sr-contents of 20% an increased irreversible residual expansion within each thermal cycle becomes apparent and shows that such improvements do not follow a linear dependency with Sr-content, but most benefits in this context can be found at Sr-contents below 20%. The results demonstrate the sensitivity of such materials micro- and macroscopic characteristics to composition. In the context of utilization of monolithic structures, fabricated entirely from Ca1-xSrxMnO3-δ, in thermochemical or thermoelectric applications, the results have considerable significance as minor A-site Sr-substitution can substantially improve macroscopic stability of monolithic structures over multiple thermal cycles. Besides the often solely regarded thermodynamic characteristic, this work demonstrates the importance to consider the impact of composition on structural behavior in materials design processes including perovskites for thermochemical applications.

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