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1.
Langmuir ; 34(16): 4914-4919, 2018 04 24.
Artigo em Inglês | MEDLINE | ID: mdl-29613802

RESUMO

Currently, biological signaling is envisaged as a combination of activation and movement, triggered by local molecular interactions and molecular diffusion, respectively. However, here, we suggest that other fundamental physical mechanisms might play an at least equally important role. We have recently shown that lipid interfaces permit the excitation and propagation of sound pulses. Here, we demonstrate that these reversible perturbations can control the activity of membrane-embedded enzymes without a requirement for molecular transport. They can thus facilitate rapid communication between distant biological entities at the speed of sound, which is here on the order of 1 m/s within the membrane. The mechanism described provides a new physical framework for biological signaling that is fundamentally different from the molecular approach that currently dominates the textbooks.

2.
Biophys J ; 96(4): 1489-94, 2009 Feb 18.
Artigo em Inglês | MEDLINE | ID: mdl-19217865

RESUMO

An incoherent elastic neutron scattering study of the molecular dynamics of native human butyrylcholinesterase and its "aged" soman-inhibited conjugate revealed a significant change in molecular flexibility on an angstrom-nanosecond scale as a function of temperature. The results were related to the stability of each state as established previously by differential scanning calorimetry. A striking relationship was found between the denaturation behavior and the molecular flexibility of the native and inhibited enzymes as a function of temperature. This was reflected in a quantitative correlation between the atomic mean-square displacements on an angstrom-nanosecond scale determined by neutron spectroscopy and the calorimetric specific heat. By the application of a simple two-state model that describes the transition from a folded to a denatured state, the denaturation temperatures of the native and the inhibited enzyme were correctly extracted from the atomic mean-square displacements. Furthermore, the transition entropy and enthalpy extracted from the model fit of the neutron data were, within the experimental accuracy, compatible with the values determined by differential scanning calorimetry.


Assuntos
Butirilcolinesterase/química , Soman/química , Algoritmos , Varredura Diferencial de Calorimetria , Entropia , Estabilidade Enzimática , Humanos , Modelos Químicos , Difração de Nêutrons , Conformação Proteica , Desnaturação Proteica , Análise Espectral , Temperatura , Termodinâmica
3.
Science ; 164(3886): 1420-1, 1969 Jun 20.
Artigo em Inglês | MEDLINE | ID: mdl-5783718

RESUMO

Following reduction of the acetylcholine receptor in the electroplax with dithiothreitol, the quaternary ammonium compounds bromoacetylcholine bromide and the p-nitrophenyl ester of (p-carboxyphenyl) trimethylammonium iodide react near the active site probably with a sulfhydryl group. The covalently attached quaternary ammonium moieties additionally interact with the active site noncovalently to activate the receptor and cause depolarization of the cell.


Assuntos
Acetilcolina , Sítios de Ligação , Receptores de Droga , Animais , Brometos/farmacologia , Enguias , Iodetos/farmacologia , Compostos de Amônio Quaternário/farmacologia , Compostos de Sulfidrila/farmacologia
4.
Science ; 253(5022): 872-9, 1991 Aug 23.
Artigo em Inglês | MEDLINE | ID: mdl-1678899

RESUMO

The three-dimensional structure of acetylcholinesterase from Torpedo californica electric organ has been determined by x-ray analysis to 2.8 angstrom resolution. The form crystallized is the glycolipid-anchored homodimer that was purified subsequent to solubilization with a bacterial phosphatidylinositol-specific phospholipase C. The enzyme monomer is an alpha/beta protein that contains 537 amino acids. It consists of a 12-stranded mixed beta sheet surrounded by 14 alpha helices and bears a striking resemblance to several hydrolase structures including dienelactone hydrolase, serine carboxypeptidase-II, three neutral lipases, and haloalkane dehalogenase. The active site is unusual because it contains Glu, not Asp, in the Ser-His-acid catalytic triad and because the relation of the triad to the rest of the protein approximates a mirror image of that seen in the serine proteases. Furthermore, the active site lies near the bottom of a deep and narrow gorge that reaches halfway into the protein. Modeling of acetylcholine binding to the enzyme suggests that the quaternary ammonium ion is bound not to a negatively charged "anionic" site, but rather to some of the 14 aromatic residues that line the gorge.


Assuntos
Acetilcolina/metabolismo , Acetilcolinesterase/química , Órgão Elétrico/enzimologia , Torpedo , Acetilcolinesterase/metabolismo , Sequência de Aminoácidos , Animais , Sítios de Ligação , Membrana Celular/enzimologia , Fenômenos Químicos , Físico-Química , Cristalização , Glutamatos , Ácido Glutâmico , Substâncias Macromoleculares , Dados de Sequência Molecular , Estrutura Molecular , Fosfatidilinositóis/metabolismo , Conformação Proteica , Homologia de Sequência do Ácido Nucleico , Difração de Raios X
5.
Science ; 263(5151): 1276-8, 1994 Mar 04.
Artigo em Inglês | MEDLINE | ID: mdl-8122110

RESUMO

The enzyme acetylcholinesterase generates a strong electrostatic field that can attract the cationic substrate acetylcholine to the active site. However, the long and narrow active site gorge seems inconsistent with the enzyme's high catalytic rate. A molecular dynamics simulation of acetylcholinesterase in water reveals the transient opening of a short channel, large enough to pass a water molecule, through a thin wall of the active site near tryptophan-84. This simulation suggests that substrate, products, or solvent could move through this "back door," in addition to the entrance revealed by the crystallographic structure. Electrostatic calculations show a strong field at the back door, oriented to attract the substrate and the reaction product choline and to repel the other reaction product, acetate. Analysis of the open back door conformation suggests a mutation that could seal the back door and thus test the hypothesis that thermal motion of this enzyme may open multiple routes of access to its active site.


Assuntos
Acetilcolinesterase/química , Conformação Proteica , Acetilcolina/metabolismo , Acetilcolinesterase/metabolismo , Sítios de Ligação , Catálise , Colina/metabolismo , Simulação por Computador , Cristalografia por Raios X , Eletroquímica , Modelos Moleculares
6.
Proteins ; 71(2): 903-9, 2008 May 01.
Artigo em Inglês | MEDLINE | ID: mdl-18004785

RESUMO

Targeted turnover of proteins is a key element in the regulation of practically all basic cellular processes. The underlying physicochemical and/or sequential signals, however, are not fully understood. This issue is particularly pertinent in light of the recent recognition that intrinsically unstructured/disordered proteins, common in eukaryotic cells, are extremely susceptible to proteolytic degradation in vitro. The in vivo half-lives of proteins were determined recently in a high-throughput study encompassing the entire yeast proteome; here we examine whether these half-lives correlate with the presence of classical degradation motifs (PEST region, destruction-box, KEN-box, or the N-terminal residue) or with various physicochemical characteristics, such as the size of the protein, the degree of structural disorder, or the presence of low-complexity regions. Our principal finding is that, in general, the half-life of a protein does not depend on the presence of degradation signals within its sequence, even of ubiquitination sites, but correlates mainly with the length of its polypeptide chain and with various measures of structural disorder. Two distinct modes of involvement of disorder in degradation are proposed. Susceptibility to degradation of longer proteins, containing larger numbers of residues in conformational disorder, suggests an extensive function, whereby the effect of disorder can be ascribed to its mere physical presence. However, after normalization for protein length, the only signal that correlates with half-life is disorder, which indicates that it also acts in an intensive manner, that is, as a specific signal, perhaps in conjunction with the recognition of classical degradation motifs. The significance of correlation is rather low; thus protein degradation is not determined by a single characteristic, but is a multi-factorial process that shows large protein-to-protein variations. Protein disorder, nevertheless, plays a key signalling role in many cases.


Assuntos
Proteínas de Saccharomyces cerevisiae/metabolismo , Algoritmos , Motivos de Aminoácidos , Meia-Vida , Peso Molecular , Peptídeo Hidrolases/metabolismo , Estrutura Secundária de Proteína , Saccharomyces cerevisiae/metabolismo
7.
Structure ; 7(3): 297-307, 1999 Mar 15.
Artigo em Inglês | MEDLINE | ID: mdl-10368299

RESUMO

BACKGROUND: Several cholinesterase inhibitors are either being utilized for symptomatic treatment of Alzheimer's disease or are in advanced clinical trials. E2020, marketed as Aricept, is a member of a large family of N-benzylpiperidine-based acetylcholinesterase (AChE) inhibitors developed, synthesized and evaluated by the Eisai Company in Japan. These inhibitors were designed on the basis of QSAR studies, prior to elucidation of the three-dimensional structure of Torpedo californica AChE (TcAChE). It significantly enhances performance in animal models of cholinergic hypofunction and has a high affinity for AChE, binding to both electric eel and mouse AChE in the nanomolar range. RESULTS: Our experimental structure of the E2020-TcAChE complex pinpoints specific interactions responsible for the high affinity and selectivity demonstrated previously. It shows that E2020 has a unique orientation along the active-site gorge, extending from the anionic subsite of the active site, at the bottom, to the peripheral anionic site, at the top, via aromatic stacking interactions with conserved aromatic acid residues. E2020 does not, however, interact directly with either the catalytic triad or the 'oxyanion hole', but only indirectly via solvent molecules. CONCLUSIONS: Our study shows, a posteriori, that the design of E2020 took advantage of several important features of the active-site gorge of AChE to produce a drug with both high affinity for AChE and a high degree of selectivity for AChE versus butyrylcholinesterase (BChE). It also delineates voids within the gorge that are not occupied by E2020 and could provide sites for potential modification of E2020 to produce drugs with improved pharmacological profiles.


Assuntos
Acetilcolinesterase/química , Doença de Alzheimer/tratamento farmacológico , Inibidores da Colinesterase/química , Indanos/química , Nootrópicos/química , Piperidinas/química , Conformação Proteica , Animais , Sítios de Ligação , Inibidores da Colinesterase/farmacologia , Inibidores da Colinesterase/uso terapêutico , Cristalografia por Raios X , Donepezila , Desenho de Fármacos , Indanos/farmacologia , Indanos/uso terapêutico , Substâncias Macromoleculares , Camundongos , Modelos Moleculares , Nootrópicos/uso terapêutico , Piperidinas/farmacologia , Piperidinas/uso terapêutico , Solventes , Relação Estrutura-Atividade , Especificidade por Substrato , Torpedo
8.
Structure ; 3(12): 1355-66, 1995 Dec 15.
Artigo em Inglês | MEDLINE | ID: mdl-8747462

RESUMO

BACKGROUND: Fasciculin (FAS), a 61-residue polypeptide purified from mamba venom, is a three-fingered toxin which is a powerful reversible inhibitor of acetylcholinesterase (AChE). Solution of the three-dimensional structure of the AChE/FAS complex would provide the first structure of a three-fingered toxin complexed with its target. RESULTS: The structure of a complex between Torpedo californica AChE and fasciculin-II (FAS-II), from the venom of the green mamba (Dendroaspis angusticeps) was solved by molecular replacement techniques, and refined at 3.0 A resolution to an R-factor of 0.231. The structure reveals a stoichiometric complex with one FAS molecule bound to each AChE subunit. The AChE and FAS conformations in the complex are very similar to those in their isolated structures. FAS is bound at the 'peripheral' anionic site of AChE, sealing the narrow gorge leading to the active site, with the dipole moments of the two molecules roughly aligned. The high affinity of FAS for AChE is due to a remarkable surface complementarity, involving a large contact area (approximately 2000 A2) and many residues either unique to FAS or rare in other three-fingered toxins. The first loop, or finger, of FAS reaches down the outer surface of the thin aspect of the gorge. The second loop inserts into the gorge, with an unusual stacking interaction between Met33 in FAS and Trp279 in AChE. The third loop points away from the gorge, but the C-terminal residue makes contact with the enzyme. CONCLUSIONS: Two conserved aromatic residues in the AChE peripheral anionic site make important contacts with FAS. The absence of these residues from chicken and insect AChEs and from butyrylcholinesterase explains the very large reduction in the affinity of these enzymes for FAS. Several basic residues in FAS make important contacts with AChE. The complementarity between FAS and AChE is unusual, inasmuch as it involves a number of charged residues, but lacks any intermolecular salt linkages.


Assuntos
Acetilcolinesterase/química , Inibidores da Colinesterase/química , Venenos Elapídicos/química , Modelos Moleculares , Conformação Proteica , Acetilcolinesterase/genética , Acetilcolinesterase/metabolismo , Sequência de Aminoácidos , Animais , Fenômenos Químicos , Físico-Química , Inibidores da Colinesterase/metabolismo , Cristalografia por Raios X , Venenos Elapídicos/metabolismo , Dados de Sequência Molecular , Mutagênese Sítio-Dirigida , Ligação Proteica , Relação Estrutura-Atividade , Torpedo/genética , Torpedo/metabolismo
9.
Biochim Biophys Acta ; 465(2): 331-40, 1977 Mar 01.
Artigo em Inglês | MEDLINE | ID: mdl-16250343

RESUMO

The nicotinic acetylcholine receptor from electrogenic tissue of Torpedo californica was solubilized by tryptic digestion of membrane fragments obtained from autolysed tissue, without use of detergent. The water-soluble acetylcholine receptor was purified by affinity chromatography on a cobra-toxin-Sepharose resin. The purified receptor bound 4000-6000 pmol per mg protein of alpha-[125I]bungarotoxin, and toxin-binding was specifically inhibited by cholinergic ligands. Gel filtration revealed a single molecular species of Stokes radius 125 +/- 10 A and on sucrose gradient centrifugation one major peak was observed of 20-22 S. Polyacrylamide gel electrophoresis in the presence of sodium dodecyl sulfate and beta-mercaptoethanol revealed two major polypeptides of mol. wt. 30 000 and 48 000.


Assuntos
Receptores Colinérgicos/química , Receptores Colinérgicos/isolamento & purificação , Animais , Biofísica/métodos , Bungarotoxinas/metabolismo , Membrana Celular/metabolismo , Centrifugação com Gradiente de Concentração , Cromatografia de Afinidade , Cromatografia em Gel , Detergentes/farmacologia , Eletroforese em Gel de Poliacrilamida , Concentração Inibidora 50 , Mercaptoetanol/farmacologia , Peptídeos/química , Receptores Colinérgicos/metabolismo , Sefarose/farmacologia , Sacarose/farmacologia , Torpedo , Água/química
10.
J Mol Biol ; 221(3): 909-18, 1991 Oct 05.
Artigo em Inglês | MEDLINE | ID: mdl-1942036

RESUMO

"Aged" organophosphoryl conjugates of serine hydrolases differ from the corresponding "non-aged" conjugates in their striking resistance to nucleophilic reactivation. The refined X-ray structures of "aged" and "non-aged" organophosphoryl conjugates of gamma-chymotrypsin were compared in order to understand the molecular basis for this resistance of "aged" conjugates. "Aged" and "non-aged" crystalline organophosphoryl-gamma-chymotrypsin conjugates were obtained by prolonged soaking of native gamma-chymotrypsin crystals with appropriate organophosphates. Thus, a representative "non-aged" conjugate, diethylphosphoryl-gamma-chymotrypsin, was obtained by soaking native crystals with paraoxon (diethyl-p-nitrophenyl phosphate), and a closely related "aged" conjugate, monoisopropyl-gamma-chymotrypsin, was obtained by soaking with diisopropylphosphorofluoridate. In both crystalline conjugates, the refined structures clearly reveal a high occupancy of the active site by the appropriate organophosphoryl moiety within covalent bonding distance of Ser195 O gamma. Whereas in the "non-aged" conjugate both ethyl groups can be visualized clearly, in the putative "aged" conjugate, as expected, only one isopropyl group is present. There is virtually no difference between the "aged" and "non-aged" conjugates either with respect to the conformation of the polypeptide backbone as a whole or with respect to the positioning of the side-chains within the active site. In the "aged" conjugate, however, close proximity (2.6 A) of the negatively charged phosphate oxygen atom of the dealkylated organophosphoryl group to His57 N epsilon 2 indicates the presence of a salt bridge between these two moieties. In contrast, in the "non-aged" conjugate the DEP moiety retains its two alkyl groups; thus, lacking a negative oxygen atom, it does not enter into such a charge-charge interaction and its nearest oxygen atom is 3.6 A away from His57 N epsilon 2. It is suggested that steric constraints imposed by the salt bridge in the "aged" conjugate lie at the basis of its resistance to reactivation.


Assuntos
Quimotripsina , Compostos Organofosforados/química , Alquilação , Quimotripsina/química , Ativação Enzimática , Ligação de Hidrogênio , Isoflurofato/química , Cinética , Modelos Moleculares , Compostos Organofosforados/metabolismo , Paraoxon/química , Solventes , Difração de Raios X
11.
J Mol Biol ; 203(3): 821-3, 1988 Oct 05.
Artigo em Inglês | MEDLINE | ID: mdl-2850366

RESUMO

A dimeric form of acetylcholinesterase from Torpedo californica was purified to homogeneity by affinity chromatography subsequent to solubilization with a phosphatidylinositol-specific phospholipase C of bacterial origin. Bipyramidal crystals of the enzyme were obtained from solutions in polyethylene glycol 200. The crystals diffract to 2.0 A (1 A = 0.1 nm) resolution. They were found to be orthorhombic, space group P2221, with a = 163.4(+/- 0.2) A, b = 112.1(+/- 0.2) A, c = 81.3(+/- 0.1) A.


Assuntos
Acetilcolinesterase/isolamento & purificação , Diester Fosfórico Hidrolases/metabolismo , Torpedo/metabolismo , Animais , Cromatografia de Afinidade , Cristalização , Fosfatidilinositol Diacilglicerol-Liase , Fosfoinositídeo Fosfolipase C , Difração de Raios X
12.
J Mol Biol ; 296(2): 713-35, 2000 Feb 18.
Artigo em Inglês | MEDLINE | ID: mdl-10669619

RESUMO

Buried water molecules and the water molecules in the active-site gorge are analyzed for five crystal structures of acetylcholinesterase from Torpedo californica in the resolution range 2.2-2.5 A (native enzyme, and four inhibitor complexes). A total of 45 buried hydration sites are identified, which are populated with between 36 and 41 water molecules. About half of the buried water is located in a distinct region neighboring the active-site gorge. Most of the buried water molecules are very well conserved among the five structures, and have low displacement parameters, B, of magnitudes similar to those of the main-chain atoms of the central beta-sheet structure. The active-site gorge of the native enzyme is filled with over 20 water molecules, which have poor hydrogen-bond coordination with an average of 2.9 polar contacts per water molecule. Upon ligand binding, distinct groups of these water molecules are displaced, whereas the others remain in positions similar to those that they occupy in the native enzyme. Possible roles of the buried water molecules are discussed, including their possible action as a lubricant to allow large-amplitude fluctuations of the loop structures forming the gorge wall. Such fluctuations are required to facilitate traffic of substrate, products and water molecules to and from the active-site. Because of their poor coordination, the gorge water molecules can be considered as "activated" as compared to bulk water. This should allow their easy displacement by incoming substrate. The relatively loose packing of the gorge water molecules leaves numerous small voids, and more efficient space-filling by substrates and inhibitors may be a major driving force of ligand binding.


Assuntos
Acetilcolinesterase/química , Acetilcolinesterase/metabolismo , Torpedo , Água/metabolismo , Alcaloides , Sequência de Aminoácidos , Animais , Sítios de Ligação , Inibidores da Colinesterase/metabolismo , Cristalização , Cristalografia por Raios X , Donepezila , Edrofônio/metabolismo , Ligação de Hidrogênio , Indanos/metabolismo , Ligantes , Modelos Moleculares , Dados de Sequência Molecular , Piperidinas/metabolismo , Estrutura Secundária de Proteína , Reprodutibilidade dos Testes , Sesquiterpenos/metabolismo , Eletricidade Estática , Água/química
13.
Biophys J ; 77(5): 2430-50, 1999 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-10545346

RESUMO

We present a model for the molecular traffic of ligands, substrates, and products through the active site of cholinesterases (ChEs). First, we describe a common treatment of the diffusion to a buried active site of cationic and neutral species. We then explain the specificity of ChEs for cationic ligands and substrates by introducing two additional components to this common treatment. The first module is a surface trap for cationic species at the entrance to the active-site gorge that operates through local, short-range electrostatic interactions and is independent of ionic strength. The second module is an ionic-strength-dependent steering mechanism generated by long-range electrostatic interactions arising from the overall distribution of charges in ChEs. Our calculations show that diffusion of charged ligands relative to neutral isosteric analogs is enhanced approximately 10-fold by the surface trap, while electrostatic steering contributes only a 1.5- to 2-fold rate enhancement at physiological salt concentration. We model clearance of cationic products from the active-site gorge as analogous to the escape of a particle from a one-dimensional well in the presence of a linear electrostatic potential. We evaluate the potential inside the gorge and provide evidence that while contributing to the steering of cationic species toward the active site, it does not appreciably retard their clearance. This optimal fine-tuning of global and local electrostatic interactions endows ChEs with maximum catalytic efficiency and specificity for a positively charged substrate, while at the same time not hindering clearance of the positively charged products.


Assuntos
Domínio Catalítico , Colinesterases/química , Colinesterases/metabolismo , Modelos Biológicos , Animais , Biocatálise , Transporte Biológico , Difusão , Humanos , Ligantes , Modelos Moleculares , Eletricidade Estática , Especificidade por Substrato , Termodinâmica
14.
Protein Sci ; 5(1): 42-51, 1996 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-8771195

RESUMO

A water-soluble dimeric form of acetylcholinesterase from electric organ tissue of Torpedo californica was obtained by solubilization with phosphatidylinositol-specific phospholipase C of the glycophosphatidylinositol-anchored species, followed by purification by affinity chromatography. The water-soluble species, in its catalytically active native conformation, did not interact with unilamellar vesicles of dimyristoylphosphatidylcholine. We previously showed that either chemical modification or exposure to low concentrations of guanidine hydrochloride converted the native enzyme to compact, partially unfolded species with the physicochemical characteristics of the molten globule state. In the present study, it was shown that such molten globule species, whether produced by mild denaturation or by chemical modification, interacted efficiently with small unilamellar vesicles. Binding was not accompanied by significant vesicle fusion, but transient leakage occurred at the time of binding. The bound acetylcholinesterase reduced the transition temperature of the vesicles slightly, and NMR data suggested that it interacted primarily with the head-group region of the bilayer. The effects of tryptic digestion of the bound acetycholinesterase were monitored by gel electrophoresis under denaturing conditions. It was found that a single polypeptide, of mass approximately 5 kDa, remained associated with the vesicles. Sequencing revealed that this is a tryptic peptide corresponding to the sequence Glu 268-Lys 315. This polypeptide contains the longest hydrophobic sequence in the protein, Leu 274-Met 308, as identified on the basis of hydropathy plots. Inspection of the three-dimensional structure of acetylcholinesterase reveals that this hydrophobic sequence is largely devoid of tertiary structure and is localized primarily on the surface of the protein. It is suggested that this hydrophobic sequence is aligned parallel to the surface of the vesicle membrane, with nonpolar residues undergoing shallow penetration into the bilayer.


Assuntos
Acetilcolinesterase/química , Dimiristoilfosfatidilcolina/química , Sequência de Aminoácidos , Animais , Bicamadas Lipídicas , Lipossomos , Espectroscopia de Ressonância Magnética , Dados de Sequência Molecular , Fragmentos de Peptídeos/química , Fragmentos de Peptídeos/isolamento & purificação , Dobramento de Proteína , Torpedo
15.
Protein Sci ; 8(12): 2553-61, 1999 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-10631970

RESUMO

Acetylcholinesterase (AChE) is an enzyme broadly distributed in many species, including parasites. It occurs in multiple molecular forms that differ in their quaternary structure and mode of anchoring to the cell surface. This review summarizes biochemical and immunological investigations carried out in our laboratories on AChE of the helmint, Schistosoma mansoni. AChE appears in S. mansoni in two principal molecular forms, both globular, with sedimentation coefficients of approximately 6.5 and 8 S. On the basis of their substrate specificity and sensitivity to inhibitors, both are "true" acetylcholinesterases. Approximately half of the AChE activity of S. mansoni is located on the outer surface of the parasite, attached to the tegumental membrane via a covalently attached glycosylphosphatidylinositol anchor. The remainder is located within the parasite, mainly associated with muscle tissue. Whereas the internal enzyme is most likely involved in termination of neurotransmission at cholinergic synapses, the role of the surface enzyme remains to be established; there are, however, indications that it is involved in signal transduction. The two forms of AChE differ in their heparin-binding properties, only the internal 8 S form of the AChE being retained on a heparin column. The two forms differ also in their immunological specificity, since they are selectively recognized by different monoclonal antibodies. Polyclonal antibodies raised against S. mansoni AChE purified by affinity chromatography are specific for the parasite AChE, reacting with both molecular forms, but do not recognize AChE from other species. They interact with the surface-localized enzyme on the intact organism, and produce almost total complement-dependent killing of the parasite. S. mansoni AChE is thus demonstrated to be a functional protein, involved in multifaceted activities, which can serve as a suitable candidate for diagnostic purposes, vaccine development, and drug design.


Assuntos
Acetilcolinesterase/química , Isoenzimas/química , Schistosoma mansoni/enzimologia , Acetilcolinesterase/metabolismo , Animais , Isoenzimas/metabolismo , Estrutura Secundária de Proteína , Especificidade por Substrato
16.
Protein Sci ; 3(2): 188-97, 1994 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-8003956

RESUMO

The active site of acetylcholinesterase (AChE) from Torpedo californica is located 20 A from the enzyme surface at the bottom of a narrow gorge. To understand the role of this gorge in the function of AChE, we have studied simulations of its molecular dynamics. When simulations were conducted with pure water filling the gorge, residues in the vicinity of the active site deviated quickly and markedly from the crystal structure. Further study of the original crystallographic data suggests that a bis-quaternary decamethonium (DECA) ion, acquired during enzyme purification, residues in the gorge. There is additional electron density within the gorge that may represent small bound cations. When DECA and 2 cations are placed within the gorge, the simulation and the crystal structure are dramatically reconciled. The small cations, more so than DECA, appear to stabilize part of the gorge wall through electrostatic interactions. This part of the gorge wall is relatively thin and may regulate substrate, product, and water movement through the active site.


Assuntos
Acetilcolinesterase/química , Simulação por Computador , Cristalografia por Raios X , Modelos Moleculares , Animais , Sítios de Ligação , Cristalização , Compostos de Decametônio/química , Eletroquímica , Estrutura Secundária de Proteína , Torpedo
17.
Protein Sci ; 4(11): 2349-57, 1995 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-8563632

RESUMO

Thermal denaturation of Torpedo californica acetylcholinesterase, a disulfide-linked homodimer with 537 amino acids in each subunit, was studied by differential scanning calorimetry. It displays a single calorimetric peak that is completely irreversible, the shape and temperature maximum depending on the scan rate. Thus, thermal denaturation of acetylcholinesterase is an irreversible process, under kinetic control, which is described well by the two-state kinetic scheme N-->D, with activation energy 131 +/- 8 kcal/mol. Analysis of the kinetics of denaturation in the thermal transition temperature range, by monitoring loss of enzymic activity, yields activation energy of 121 +/- 20 kcal/mol, similar to the value obtained by differential scanning calorimetry. Thermally denatured acetylcholinesterase displays spectroscopic characteristics typical of a molten globule state, similar to those of partially unfolded enzyme obtained by modification with thiol-specific reagents. Evidence is presented that the partially unfolded states produced by the two different treatments are thermodynamically favored relative to the native state.


Assuntos
Acetilcolinesterase/química , Temperatura Alta , Desnaturação Proteica , Torpedo , Animais , Varredura Diferencial de Calorimetria , Dissulfetos/química , Eletroforese em Gel de Poliacrilamida , Guanidina , Guanidinas , Cinética , Espectrometria de Fluorescência , Compostos de Sulfidrila/química , Termodinâmica
18.
Protein Sci ; 5(9): 1852-64, 1996 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-8880909

RESUMO

Chemical modification with sulfhydryl reagents of the single, nonconserved cysteine residue Cys231 in each subunit of a disulfide-linked dimer of Torpedo californica acetylcholinesterase produces a partially unfolded inactive state. Another partially unfolded state can be obtained by exposure of the enzyme to 1-2 M guanidine hydrochloride. Both these states display several important features of a molten globule, but differ in their spectroscopic (CD, intrinsic fluorescence) and hydrodynamic (Stokes radii) characteristics. With reversal of chemical modification of the former state or removal of denaturant from the latter, both states retain their physiochemical characteristics. Thus, acetylcholinesterase can exist in two molten globule states, both of which are long-lived under physiologic conditions without aggregating, and without either intraconverting or reverting to the native state. Both states undergo spontaneous intramolecular thioldisulfide exchange, implying that they are flexible. As revealed by differential scanning calorimetry, the state produced by chemical modification lacks any heat capacity peak, presumably due to aggregation during scanning, whereas the state produced by guanidine hydrochloride unfolds as a single cooperative unit, thermal transition being completely reversible. Sucrose gradient centrifugation reveals that reduction of the interchain disulfide of the native acetylcholinesterase dimer converts it to monomers, whereas, after such reduction, the two subunits remain completely associated in the partially unfolded state generated by guanidine hydrochloride, and partially associated in that produced by chemical modification. It is suggested that a novel hydrophobic core, generated across the subunit interfaces, is responsible for this noncovalent association. Transition from the unfolded state generated by chemical modification to that produced by guanidine hydrochloride is observed only in the presence of the denaturant, yielding, on extrapolation to zero guanidine hydrochloride, a high free energy barrier (ca. 23.8 kcal/mol) separating these two flexible, partially unfolded states.


Assuntos
Acetilcolinesterase/química , Dobramento de Proteína , Torpedo , Animais , Varredura Diferencial de Calorimetria , Fenômenos Químicos , Físico-Química , Inibidores da Colinesterase/farmacologia , Dicroísmo Circular , Cisteína/química , Dissulfetos/química , Ditiotreitol/farmacologia , Órgão Elétrico/enzimologia , Espectroscopia de Ressonância de Spin Eletrônica , Guanidina , Guanidinas/farmacologia , Substâncias Macromoleculares , Espectrometria de Fluorescência , Reagentes de Sulfidrila/farmacologia
19.
Protein Sci ; 10(10): 1953-61, 2001 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-11567086

RESUMO

The nature of the dynamical coupling between a protein and its surrounding solvent is an important, yet open issue. Here we used temperature-dependent protein crystallography to study structural alterations that arise in the enzyme acetylcholinesterase upon X-ray irradiation at two temperatures: below and above the glass transition of the crystal solvent. A buried disulfide bond, a buried cysteine, and solvent exposed methionine residues show drastically increased radiation damage at 155 K, in comparison to 100 K. Additionally, the irradiation-induced unit cell volume increase is linear at 100 K, but not at 155 K, which is attributed to the increased solvent mobility at 155 K. Most importantly, we observed conformational changes in the catalytic triad at the active site at 155 K but not at 100 K. These changes lead to an inactive catalytic triad conformation and represent, therefore, the observation of radiation-inactivation of an enzyme at the atomic level. Our results show that at 155 K, the protein has acquired--at least locally--sufficient conformational flexibility to adapt to irradiation-induced alterations in the conformational energy landscape. The increased protein flexibility may be a direct consequence of the solvent glass transition, which expresses as dynamical changes in the enzyme's environment. Our results reveal the importance of protein and solvent dynamics in specific radiation damage to biological macromolecules, which in turn can serve as a tool to study protein flexibility and its relation to changes in a protein's environment.


Assuntos
Acetilcolinesterase/química , Dissulfetos/química , Solventes/química , Acetilcolinesterase/efeitos da radiação , Animais , Sítios de Ligação , Cristalização , Cristalografia por Raios X , Vidro/química , Modelos Moleculares , Conformação Proteica/efeitos da radiação , Temperatura , Torpedo
20.
Protein Sci ; 11(8): 2022-32, 2002 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-12142456

RESUMO

A monomeric form of acetylcholinesterase from the venom of Bungarus fasciatus is converted to a partially unfolded molten globule species by thermal inactivation, and subsequently aggregates rapidly. To separate the kinetics of unfolding from those of aggregation, single molecules of the monomeric enzyme were encapsulated in reverse micelles of Brij 30 in 2,2,4-trimethylpentane, or in large unilamellar vesicles of egg lecithin/cholesterol at various protein/micelle (vesicle) ratios. The first-order rate constant for thermal inactivation at 45 degrees C, of single molecules entrapped within the reverse micelles (0.031 min(-1)), was higher than in aqueous solution (0.007 min(-1)) or in the presence of normal micelles (0.020 min(-1)). This clearly shows that aggregation does not provide the driving force for thermal inactivation of BfAChE. Within the large unilamellar vesicles, at average protein/vesicle ratios of 1:1 and 10:1, the first-order rate constants for thermal inactivation of the encapsulated monomeric acetylcholinesterase, at 53 degrees C, were 0.317 and 0.342 min(-1), respectively. A crosslinking technique, utilizing the photosensitive probe, hypericin, showed that thermal denaturation produces a distribution of species ranging from dimers through to large aggregates. Consequently, at a protein/vesicle ratio of 10:1, aggregation can occur upon thermal denaturation. Thus, these experiments also demonstrate that aggregation does not drive the thermal unfolding of Bungarus fasciatus acetylcholinesterase. Our experimental approach also permitted monitoring of recovery of enzymic activity after thermal denaturation in the absence of a competing aggregation process. Whereas no detectable recovery of enzymic activity could be observed in aqueous solution, up to 23% activity could be obtained for enzyme sequestered in the reverse micelles.


Assuntos
Acetilcolinesterase/química , Bungarus/metabolismo , Perileno/análogos & derivados , Acetilcolinesterase/metabolismo , Animais , Antracenos , Centrifugação com Gradiente de Concentração/métodos , Dicroísmo Circular , Eletroforese em Gel de Poliacrilamida , Temperatura Alta , Cinética , Micelas , Microquímica , Perileno/química , Fosfolipídeos/química , Fosfolipídeos/metabolismo , Desnaturação Proteica , Dobramento de Proteína , Espectrometria de Fluorescência , Temperatura , Fatores de Tempo
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