Nano silica's role in regulating heavy metal uptake in Calendula officinalis.

BACKGROUND: Soil contamination with heavy metals poses a significant threat to plant health and human well-being. This study explores the potential of nano silica as a solution for mitigating heavy metal uptake in Calendula officinalis. RESULTS: Greenhouse experiments demonstrated, 1000 mg•kg- 1 nano silica caused a 6% increase in soil pH compared to the control treatment. Also in 1000 mg. kg- 1 nano silica, the concentrations of available Pb (lead), Zn (zinc), Cu (copper), Ni (nickel), and Cr (chromium) in soil decreased by 12%, 11%, 11.6%, 10%, and 9.5%, respectively, compared to the control. Nano silica application significantly reduces heavy metal accumulation in C. officinalis exposed to contaminated soil except Zn. In 1000 mg.kg- 1 nano silica shoots Zn 13.28% increased and roots Zn increased 13% compared to the control treatment. Applying nano silica leads to increase the amount of phosphorus (P) 25%, potassium (K) 26% uptake by plant, In 1000 mg.kg - 1 treatment the highest amount of urease enzyme activity was 2.5%, dehydrogenase enzyme activity, 23.6% and the highest level of alkaline phosphatase enzyme activity was 13.5% higher than the control treatment. CONCLUSION: Nano silica, particularly at a concentration of 1000 mg.kg - 1, enhanced roots and shoots length, dry weight, and soil enzyme activity Moreover, it increased P and K concentrations in plant tissues while decreasing heavy metals uptake by plant.

In vitro drought stress and drought-related gene expression in banana.

BACKGROUND: Banana is largely grown in tropical and subtropical climates. It is rich in various food components and has quite a high economic value. Unavailable ecological and agricultural conditions cause quantitative and qualitative losses in banana cultivation. Along with global climate change, drought stress is becoming prominent day by day. METHODS AND RESULTS: Micropropagation and rooting performance of Azman and Grand Naine banana cultivars were investigated under in vitro drought stress conditions. The expression levels of four different genes of CDPK gene family in leaf and root tissues of the rooted plants were determined with the use of qRT-PCR. Greater expression levels of four MaCDPK genes were seen in Azman cultivar than in Grand Naine cultivar. MaCDPK9 and MaCDPK21 had greater expression levels in root tissue and MaCDPK1 and MaCDPK40 genes in leaf tissues. CONCLUSIONS: Response of different banana cultivars to in vitro drought stress was determined in this study. The expression levels of the genes of CDPK gene family with a significant role in drought stress had significant contributions in elucidation of banana plant response to drought stress.

Molecular Characterization of Cyclamen Species Collected from Different Parts of Turkey by RAPD and SRAP Markers.

The genus Cyclamen (family Myrsinaceae) contains about 20 species, most of which occur in the Mediterranean region. Turkey has critically important Cyclamen genetic resources. Molecular characterization of plant materials collected from different regions of Turkey in which Cyclamen species grow naturally, namely Adana, Antalya, Aydin, Mugla, Izmir, Denizli, Kahramanmaras, Osmaniye, Eskisehir, Trabzon, and Rize provinces, was performed using RAPD and SRAP markers. DNA was successfully amplified by 30 RAPD primers and 14 SRAP primer pairs. Among the 470 bands generated by the RAPD primers, 467 were polymorphic. The number of bands detected by a single primer set ranged from 11 to 22 (average of 15.6). The percentage polymorphism was 99.3 % based on the RAPD data. In the SRAP analysis, a total of 216 bands were generated, showing 100 % polymorphism. The number of bands detected by a single primer set ranged from 9 to 22 (average of 15.4). All data were scored and UPGMA dendrograms were constructed with similar results in both marker systems, i.e., different species from nine provinces of Turkey were separated from each other in the dendrograms with the same species being clustered together.

Genetic Characterization of Turkish Snake Melon (Cucumis melo L. subsp. melo flexuosus Group) Accessions Revealed by SSR Markers.

Snake melon is an important cucurbit crop especially in the Southeastern and the Mediterranean region of Turkey. It is consumed as fresh or pickled. The production is mainly done with the local landraces in the country. Turkey is one of the secondary diversification centers of melon and possesses valuable genetic resources which have different morphological characteristics in case of snake melon. Genetic diversity of snake melon genotypes collected from different regions of Turkey and reference genotypes obtained from World Melon Gene Bank in Avignon-France was examined using 13 simple sequence repeat (SSR) markers. A total of 69 alleles were detected, with an average of 5.31 alleles per locus. The polymorphism information content of SSR markers ranged from 0.19 to 0.57 (average 0.38). Based on cluster analysis, two major groups were defined. The first major group included only one accession (61), while the rest of all accessions grouped in the second major group and separated into different sub-clusters. Based on SSR markers, cluster analysis indicated that considerably high genetic variability exists among the examined accessions; however, Turkish snake melon accessions were grouped together with the reference snake melon accessions.

Leveraging machine learning to unravel the impact of cadmium stress on goji berry micropropagation.

This study investigates the influence of cadmium (Cd) stress on the micropropagation of Goji Berry (Lycium barbarum L.) across three distinct genotypes (ERU, NQ1, NQ7), employing an array of machine learning (ML) algorithms, including Multilayer Perceptron (MLP), Support Vector Machines (SVM), Random Forest (RF), Gaussian Process (GP), and Extreme Gradient Boosting (XGBoost). The primary motivation is to elucidate genotype-specific responses to Cd stress, which poses significant challenges to agricultural productivity and food safety due to its toxicity. By analyzing the impacts of varying Cd concentrations on plant growth parameters such as proliferation, shoot and root lengths, and root numbers, we aim to develop predictive models that can optimize plant growth under adverse conditions. The ML models revealed complex relationships between Cd exposure and plant physiological changes, with MLP and RF models showing remarkable prediction accuracy (R2 values up to 0.98). Our findings contribute to understanding plant responses to heavy metal stress and offer practical applications in mitigating such stress in plants, demonstrating the potential of ML approaches in advancing plant tissue culture research and sustainable agricultural practices.

Genotype-specific responses to in vitro drought stress in myrtle (Myrtus communis L.): integrating machine learning techniques.

Background: Myrtle (Myrtus communis L.), native to the Mediterranean region of Türkiye, is a valuable plant with applications in traditional medicine, pharmaceuticals, and culinary practices. Understanding how myrtle responds to water stress is essential for sustainable cultivation as climate change exacerbates drought conditions. Methods: This study investigated the performance of selected myrtle genotypes under in vitro drought stress by employing tissue culture techniques, rooting trials, and acclimatization processes. Genotypes were tested under varying polyethylene glycol (PEG) concentrations (1%, 2%, 4%, and 6%). Machine learning (ML) algorithms, including Gaussian process (GP), support vector machine (SVM), Random Forest (RF), and Extreme Gradient Boosting (XGBoost), were utilized to model and predict micropropagation and rooting efficiency. Results: The research revealed a genotype-dependent response to drought stress. Black-fruited genotypes exhibited higher micropropagation rates compared to white-fruited ones under stress conditions. The application of ML models successfully predicted micropropagation and rooting efficiency, providing insights into genotype performance. Conclusions: The findings suggest that selecting drought-tolerant genotypes is crucial for enhancing myrtle cultivation. The results underscore the importance of genotype selection and optimization of cultivation practices to address climate change impacts. Future research should explore the molecular mechanisms of stress responses to refine breeding strategies and improve resilience in myrtle and similar economically important crops.

Advanced Biotechnological Interventions in Mitigating Drought Stress in Plants.

This comprehensive article critically analyzes the advanced biotechnological strategies to mitigate plant drought stress. It encompasses an in-depth exploration of the latest developments in plant genomics, proteomics, and metabolomics, shedding light on the complex molecular mechanisms that plants employ to combat drought stress. The study also emphasizes the significant advancements in genetic engineering techniques, particularly CRISPR-Cas9 genome editing, which have revolutionized the creation of drought-resistant crop varieties. Furthermore, the article explores microbial biotechnology's pivotal role, such as plant growth-promoting rhizobacteria (PGPR) and mycorrhizae, in enhancing plant resilience against drought conditions. The integration of these cutting-edge biotechnological interventions with traditional breeding methods is presented as a holistic approach for fortifying crops against drought stress. This integration addresses immediate agricultural needs and contributes significantly to sustainable agriculture, ensuring food security in the face of escalating climate change challenges.

Genetic transformation in citrus.

Citrus is one of the world's important fruit crops. Recently, citrus molecular genetics and biotechnology work have been accelerated in the world. Genetic transformation, a biotechnological tool, allows the release of improved cultivars with desirable characteristics in a shorter period of time and therefore may be useful in citrus breeding programs. Citrus transformation has now been achieved in a number of laboratories by various methods. Agrobacterium tumefaciens is used mainly in citrus transformation studies. Particle bombardment, electroporation, A. rhizogenes, and a new method called RNA interference are used in citrus transformation studies in addition to A. tumefaciens. In this review, we illustrate how different gene transformation methods can be employed in different citrus species.

In vitro and ex vitro propagation of Turkish myrtles through conventional and plantform bioreactor systems.

The myrtle (Myrtus communis) plant naturally grows in the temperate Mediterranean and subtropical regions and is used for various purposes; thus, it is among the promising species of horticultural crops. This study aimed to evaluate and compare the performance of different propagation systems, including rooting, solid media propagation, rooting, and with the Plantform bioreactor system, in achieving healthy and rapid growth of four myrtle genotypes with diverse genetic origins and well-regional adaptation. The selection of myrtle genotypes with distinct genetic backgrounds and proven adaptability to specific regions allowed for a comprehensive assessment of the propagation systems under investigation. Present findings proved that the Plantform system, the new-generation tissue culture system, was quite successful in micropropagation and rooting myrtle genotypes. We succeeded in vitro micropropagation and rooting of diverse wild myrtle genotypes, enabling year-round propagation without reliance on specific seasons or environmental conditions. The process involved initiating cultures from explants and multiplying them through shoot proliferation in a controlled environment. This contributes to sustainable plant propagation, preserving and utilizing genetic resources for conservation and agriculture.

The fate of plant growth-promoting rhizobacteria in soilless agriculture: future perspectives.

The application of plant growth-promoting rhizobacteria (PGPRs) can be an excellent and eco-friendly alternative to the use of chemical fertilizers. While PGPRs are often used in traditional agriculture to facilitate yield increases, their use in soilless agriculture has been limited. Soilless agriculture is growing in popularity among commercial farmers because it eliminates soil-borne problems, and the essential strategy is to keep the system as clean as possible. However, a new trend is the inclusion of PGPRs to enhance plant development. Despite the plethora of research that has been performed to date, there remains a huge knowledge gap that needs to be addressed to facilitate the commercialization of PGPRs for sustainable soilless agriculture. Hence, the development of proper strategies and additional research and trials are required. The present review provides an update on recent developments in the use of PGPRs in soilless agriculture, examining these bacteria from different perspectives in an attempt to generate critical discussion and aid in the understanding of the interaction between soilless agriculture and PGPRs.