Pelagostrobilidium liui n. sp. (Ciliophora, Choreotrichida) from the Coastal Waters of Northeastern Taiwan and an Improved Description of Pelagostrobilidium minutum Liu et al., 2012.

The number of somatic kineties in Pelagostrobilidium ranges from 4 to 6 according to the present state of knowledge. This study investigates Pelagostrobilidium liui n. sp. using live observation, protargol stain, and small subunit rDNA data sequencing. Pelagostrobilidium liui n. sp. is characterized by having a spherical-shaped body, four somatic kineties, with kinety 2 spiraled around the left side of body, about six elongated external membranelles, and invariably no buccal membranelle. It differs from its most similar congener, Pelagostrobilidium minutum Liu et al., , in (i) cell shape; (ii) macronucleus width; (iii) oral apparatus; (iv) anterior orientation of kinety 2; (v) location where kinety 2 commences; (vi) arrangement of kinety 1; (vii) distance between the anterior cell end and the locations where kineties commence; and (viii) the presence of 12 different bases (including two deletions) in the small subunit rDNA sequences. The diagnosis of P. minutum Liu et al., is also improved to include the following new characteristics: invariably four somatic kineties; kineties 2 and 4 alone commence at the same level; kinety 2 originates from right anterior cell half on ventral side, extends sinistrally posteriorly, over kinety 1, around left posterior region, terminates near posterior cell end on dorsal side; kinety 1 commences below anterior third of kinety 2.

Phylogenetic position of the genus Cyrtostrombidium, with a description of Cyrtostrombidium paralongisomum nov. spec. and a redescription of Cyrtostrombidium longisomum Lynn & Gilron, 1993 (Protozoa, Ciliophora) based on live observation, protargol impregnation, and 18S rDNA sequences.

We redescribe Cyrtostrombidium longisomum Lynn & Gilron, 1993, the type species of the genus Cyrtostrombidium, and describe the new species Cyrtostrombidium paralongisomum n. sp. using live observation, protargol staining and molecular data. The morphological characters of these two species are clearly distinct, i.e., dikinetid numbers in the girdle and ventral kineties; however, it is difficult to separate them by 18S rDNA sequences because they differ by only 8 bp, indicating that 18S rDNA sequences are insufficient for separating different species in the genus Cyrtostrombidium. We not only observed the position of the oral primordium in the genus Cyrtostrombidium but also observed a possibly homoplasious trait, a dorsal split in the girdle kinety, in (1) Apostrombidium, (2) Varistrombidium, and (3) Cyrtostrombidium/Williophrya. This partially supports the hypothesis of somatic ciliary pattern evolution recently put forth by Agatha and Strüder-Kypke.

Morphological, Molecular, and Growth Characteristics of a Cryptic Species, Strombidium parasulcatum n. sp. (Alveolata: Ciliophora: Oligotrichida).

A new marine planktonic ciliate from Taiwan, Strombidium parasulcatum sp. n., is described based on live observations, protargol staining, and molecular data. Its morphological characters are similar to those of Strombidium sulcatum Claparède and Lachmann, 1859 sensu Song et al., 2000 but differ from S. sulcatum sensu Fauré-Fremiet, 1912 and sensu Fauré-Fremiet and Ganier, 1970 by several morphological characters. The 18S rRNA gene sequences of the two forms display 76 base pair differences (about 5%), indicating that they should be considered separate species. The highest observed specific growth rates of S. parasulcatum in culture were 1.79 day-1 over 1 day and 1.52 day-1 over 2 days, both starting at day 5. Bacteria appear to be an important food resource for the cultivation of this medium-sized oligotrich ciliate. This and other recent studies suggest that cryptic species may be common in the genus Strombidium, and an integrative approach including morphological, ecological, and molecular data should be used to address this question.

Microfluidic channel integrated with a lattice lightsheet microscopic system for continuous cell imaging.

In this study, a continuous cell-imaging system with subcellular resolution was developed by integrating a microfluidic platform with lattice lightsheet microscopy (LLSM). To reduce aberrations of the lightsheet propagating into the device, a microfluidic channel sealed with a water refractive index-matched thin film was fabricated. When the lightsheet emerged from the water-immersed objectives and penetrated through the water refractive-matched thin film into the microfluidic channel at an incident angle, less light scattering and fewer aberrations were found. Suspended cells flowed across the lattice lightsheet, and an imaging system with the image plane perpendicular to the lightsheet was used to sequentially acquire cell images. By applying a thinner lattice lightsheet, higher-resolution, higher-contrast images were obtained. Furthermore, three-dimensional cell images could be achieved by reconstructing sequential two-dimensional cell images.

Spirotontonia taiwanica n. sp. (Ciliophora: Oligotrichida) from the coastal waters of northeastern Taiwan: morphology and nuclear small subunit rDNA Sequence.

The marine oligotrichous ciliate Spirotontonia taiwanica n. sp. isolated from the coastal waters of northeastern Taiwan is reported, using live observation, protargol preparations and molecular data. The new species differs from the most similar, known congener Spirotontonia turbinata in the following features: (1) lower number of buccal membranelles (11-13 vs. 13-17); (2) higher number of whorls of girdle kinety (2.5 vs. 1.5); (3) lower number of macronuclear nodules (20-31 vs. 28-40); (4) larger cell size (80-104 x 40-72 vs. 44-75 x 29-56 microm); (5) larger anterior cell end to buccal vertex (50 vs. 33 microm); (6) larger ratio of cell length to cell width (1.74 vs. 1.38); (7) the different beginning of the girdle kinety (posterior to the buccal vertex vs. left of the buccal zone portion); and (8) the disappearance of the L-shaped argyrophilic structures in the last half whorl and occasionally the first 1-10 dikinetids (i.e. yes vs. no). The molecular data also reveal two distinct species, deviating by 2% or 33% base pairs.

Parastrombidinopsis minima n. sp. (Ciliophora: Oligotrichia) from the coastal waters of northeastern Taiwan: morphology and small subunit ribosomal DNA sequence.

Parastrombidinopsis minima n. sp. is investigated, using live observations, protargol preparations, and molecular data. In living cells, the ranges of cell length are 85-95 microm, cell width 60-70 microm, and oral diameter 40-50 microm. In protargol-impregnated specimens, cell length ranges between 43 and 71 microm, cell width between 23 and 42 microm, and oral diameter between 13 and 24 microm. The numbers of external oral polykinetids are 12-16 and of somatic kineties are 11-13. There are always two ovoid macronuclei (9-16 x 4-9 microm). Based on the analysis of morphologic data, the new species can be placed in the family Strombidinopsidae, but based on the small subunit rRNA gene sequence data, the Parastrombidinopsis species are more closely associated with strobilidiids and tintinnids.

The dynamics of a dominant dinoflagellate, Noctiluca scintillans, in the subtropical coastal waters of the Matsu archipelago.

Bioluminescent seas caused by blooms of the dinoflagellate Noctiluca scintillans are a famous scenic attraction in the Matsu archipelago near the Chinese coast in the northern part of the Taiwan Strait. The relationship between the abundance of N. scintillans and various environmental factors was examined in the subtropical coastal waters of these islands from April to December, 2016. N. scintillans disappeared after June 20th, when the sea water temperature exceeded 27°C. A strong inverse correlation between N. scintillans and diatoms in PCA analysis indicated that diatoms suffer high grazing pressure from N. scintillans. N. scintillans appeared most abundantly during the flood season, when diatoms are most abundant. Strong inverse correlations between N. scintillans and the wind speed and wind direction in PCA further point to the effect of wind on the accumulation of cells.

Redescription of the tintinnid Stenosemella pacifica Kofoid and Campbell, 1929 (Ciliophora, Spirotricha) based on live observation, protargol Impregnation, and Scanning Electron Microscopy.

The tintinnid ciliate Stenosemella pacifica Kofoid and Campbell, 1929 was occasionally recorded from the pelagial of temperate, subtropical, and tropical neritic waters. Since its cytological features were unknown, the species is redescribed from material collected in the pelagial of the Irish Sea, using live observation, protargol impregnation, and scanning electron microscopy. Furthermore, the species diagnosis is improved to include new characteristics, e.g. the somatic ciliary pattern comprising a ventral, dorsal, and posterior kinety as well as a right, left, and lateral ciliary field. The stomatogenesis of S. pacifica is typical for species with such a complex somatic ciliary pattern: the oral primordium develops hypoapokinetally posterior to the lateral ciliary field. The presence of windows in the lorica collar of Stenosemella ventricosa, the type of the genus, necessitates (i) an improved genus diagnosis, (ii) a synonymization of the genus LuminellaKofoid and Campbell, 1939, and (iii) a transfer of the Luminella species to the genus Stenosemella, including Luminella neocalifornica, which becomes Stenosemella neocalifornica nov. comb. Owing to the lack of a description, Stenosemella crateri is considered a nomen nudum.