Detalhe da pesquisa
1.
HOCOMOCO in 2024: a rebuild of the curated collection of binding models for human and mouse transcription factors.
Nucleic Acids Res
; 52(D1): D154-D163, 2024 Jan 05.
Artigo
em Inglês
| MEDLINE | ID: mdl-37971293
2.
EpiFactors 2022: expansion and enhancement of a curated database of human epigenetic factors and complexes.
Nucleic Acids Res
; 51(D1): D564-D570, 2023 01 06.
Artigo
em Inglês
| MEDLINE | ID: mdl-36350659
3.
ANANASTRA: annotation and enrichment analysis of allele-specific transcription factor binding at SNPs.
Nucleic Acids Res
; 50(W1): W51-W56, 2022 07 05.
Artigo
em Inglês
| MEDLINE | ID: mdl-35446421
4.
A holistic view of mouse enhancer architectures reveals analogous pleiotropic effects and correlation with human disease.
BMC Genomics
; 21(1): 754, 2020 Nov 02.
Artigo
em Inglês
| MEDLINE | ID: mdl-33138777
5.
HOCOMOCO: towards a complete collection of transcription factor binding models for human and mouse via large-scale ChIP-Seq analysis.
Nucleic Acids Res
; 46(D1): D252-D259, 2018 01 04.
Artigo
em Inglês
| MEDLINE | ID: mdl-29140464
6.
HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models.
Nucleic Acids Res
; 44(D1): D116-25, 2016 Jan 04.
Artigo
em Inglês
| MEDLINE | ID: mdl-26586801
7.
Early B-cell factor 1 (EBF1) is critical for transcriptional control of SLAMF1 gene in human B cells.
Biochim Biophys Acta
; 1859(10): 1259-68, 2016 10.
Artigo
em Inglês
| MEDLINE | ID: mdl-27424222
8.
Negative selection maintains transcription factor binding motifs in human cancer.
BMC Genomics
; 17 Suppl 2: 395, 2016 06 23.
Artigo
em Inglês
| MEDLINE | ID: mdl-27356864
9.
HOCOMOCO: a comprehensive collection of human transcription factor binding sites models.
Nucleic Acids Res
; 41(Database issue): D195-202, 2013 Jan.
Artigo
em Inglês
| MEDLINE | ID: mdl-23175603
10.
Enhanced C/EBP binding to G·T mismatches facilitates fixation of CpG mutations in cancer and adult stem cells.
Cell Rep
; 35(10): 109221, 2021 06 08.
Artigo
em Inglês
| MEDLINE | ID: mdl-34107262
11.
Assessing Ribosome Distribution Along Transcripts with Polarity Scores and Regression Slope Estimates.
Methods Mol Biol
; 2252: 269-294, 2021.
Artigo
em Inglês
| MEDLINE | ID: mdl-33765281
12.
Landscape of allele-specific transcription factor binding in the human genome.
Nat Commun
; 12(1): 2751, 2021 05 12.
Artigo
em Inglês
| MEDLINE | ID: mdl-33980847
13.
Insights gained from a comprehensive all-against-all transcription factor binding motif benchmarking study.
Genome Biol
; 21(1): 114, 2020 05 11.
Artigo
em Inglês
| MEDLINE | ID: mdl-32393327
14.
What Do Neighbors Tell About You: The Local Context of Cis-Regulatory Modules Complicates Prediction of Regulatory Variants.
Front Genet
; 10: 1078, 2019.
Artigo
em Inglês
| MEDLINE | ID: mdl-31737053
15.
Genome-wide map of human and mouse transcription factor binding sites aggregated from ChIP-Seq data.
BMC Res Notes
; 11(1): 756, 2018 Oct 23.
Artigo
em Inglês
| MEDLINE | ID: mdl-30352610
16.
The single nucleotide variant rs12722489 determines differential estrogen receptor binding and enhancer properties of an IL2RA intronic region.
PLoS One
; 12(2): e0172681, 2017.
Artigo
em Inglês
| MEDLINE | ID: mdl-28234966
17.
Multiple single nucleotide polymorphisms in the first intron of the IL2RA gene affect transcription factor binding and enhancer activity.
Gene
; 602: 50-56, 2017 Feb 20.
Artigo
em Inglês
| MEDLINE | ID: mdl-27876533
18.
Enhanced C/EBP binding to G·T mismatches facilitates fixation of CpG mutations in cancer and adult stem cells.
Cell Rep
; 36(2): 109365, 2021 Jul 13.
Artigo
em Inglês
| MEDLINE | ID: mdl-34260924
19.
EpiFactors: a comprehensive database of human epigenetic factors and complexes.
Database (Oxford)
; 2015: bav067, 2015.
Artigo
em Inglês
| MEDLINE | ID: mdl-26153137
20.
Jaccard index based similarity measure to compare transcription factor binding site models.
Algorithms Mol Biol
; 8(1): 23, 2013 Sep 30.
Artigo
em Inglês
| MEDLINE | ID: mdl-24074225