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1.
Plant Biotechnol J ; 22(4): 929-945, 2024 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-38009862

RESUMO

The control of flowering time in maize is crucial for reproductive success and yield, and it can be influenced by environmental stresses. Using the approaches of Ac/Ds transposon and transposable element amplicon sequencing techniques, we identified a Ds insertion mutant in the ZmPRR37 gene. The Ds insertion showed a significant correlation with days to anthesis. Further research indicated that ZmPRR37-CR knockout mutants exhibited early flowering, whereas ZmPRR37-overexpression lines displayed delayed flowering compared to WT under long-day (LD) conditions. We demonstrated that ZmPRR37 repressed the expression of ZmNF-YC2 and ZmNF-YA3 to delay flowering. Association analysis revealed a significant correlation between flowering time and a SNP2071-C/T located upstream of ZmPRR37. The SNP2071-C/T impacted the binding capacity of ZmELF6 to the promoter of ZmPRR37. ZmELF6 also acted as a flowering suppressor in maize under LD conditions. Notably, our study unveiled that ZmPRR37 can enhance salt stress tolerance in maize by directly regulating the expression of ABA-responsive gene ZmDhn1. ZmDhn1 negatively regulated maize salt stress resistance. In summary, our findings proposed a novel pathway for regulating photoperiodic flowering and responding to salt stress based on ZmPRR37 in maize, providing novel insights into the integration of abiotic stress signals into floral pathways.


Assuntos
Flores , Proteínas de Plantas , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Flores/fisiologia , Zea mays/genética , Zea mays/metabolismo , Fotoperíodo , Regiões Promotoras Genéticas , Regulação da Expressão Gênica de Plantas/genética
2.
Plant Cell Environ ; 47(3): 885-899, 2024 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-38164019

RESUMO

Drought is a major abiotic stress that limits maize production worldwide. Therefore, it is of great importance to improve drought tolerance in crop plants for sustainable agriculture. In this study, we examined the roles of Cys2 /His2 zinc-finger-proteins (C2H2-ZFPs) in maize's drought tolerance as C2H2-ZFPs have been implicated for plant stress tolerance. By subjecting 150 Ac/Ds mutant lines to drought stress, we successfully identified a Ds-insertion mutant, zmc2h2-149, which shows increased tolerance to drought stress. Overexpression of ZmC2H2-149 in maize led to a decrease in both drought tolerance and crop yield. DAP-Seq, RNA-Seq, Y1H and LUC assays additionally showed that ZmC2H2-149 directly suppresses the expression of a positive drought tolerance regulator, ZmHSD1 (hydroxysteroid dehydrogenase 1). Consistently, the zmhsd1 mutants exhibited decreased drought tolerance and grain yield under water deficit conditions compared to their respective wild-type plants. Our findings thus demonstrated that ZmC2H2-149 can regulate ZmHSD1 for drought stress tolerance in maize, offering valuable theoretical and genetic resources for maize breeding programmes that aim for improving drought tolerance.


Assuntos
Resistência à Seca , Zea mays , Zea mays/fisiologia , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Secas , Estresse Fisiológico/genética , Regulação da Expressão Gênica de Plantas
3.
Fish Shellfish Immunol ; 144: 109275, 2024 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-38081443

RESUMO

MicroRNAs play crucial roles in various biological processes, including but not limited to differentiation, development, disease, and immunity. However, their immunoregulatory roles in half-smooth tongue sole are lacking. Our previous studies indicated that miR-722 could target C5aR1 to modulate the complement pathway to alleviate inflammatory response and even affect the mortality after the bacterial infection with Vibrio anguillarum. Driven by the purpose of revealing the underlying mechanisms, in this study, we investigated the effects of miR-722 on the gene expression and alternative splicing (AS) in the liver of half-smooth tongue sole after Vibrio anguillarum infection, with the approach of miR-722 overexpression/silencing and subsequent RNA-seq. Among the different comparisons, the I group (miR-722 inhibitor and V. anguillarum) versus blank control (PBS) exhibited the highest number of differentially expressed genes (DEGs), suggesting that the immune response was overactivated after inhibiting the miR-722. In addition, enrichment analyses were performed to reveal the functions of DEGs and differential AS (DAS) genes, reflecting the enrichment of RNA splicing and immune-related pathways including NF-κB and T cell receptor signaling pathway. Comparing the M group (miR-722 mimic and V. anguillarum) with the negative control (random sequence and V. anguillarum), two immune-related genes, cd48 and mapk8, were differentially expressed, of which mapk8 was also differentially spliced, indicating their importance in the immune response. Furthermore, representative gene analysis was performed, suggesting their corresponding functional changes due to AS. To verify the RNA-seq data, quantitative real-time PCR was employed with twenty pairs of primers for DEGs and DAS events. Overall, our results demonstrated that miR-722 could mediate the transcriptome-wide changes of gene expression and AS in half-smooth tongue sole, and provided insights into the regulatory role of miR-722 in immune responses, laying the foundation for further functional analyses and practical applications in aquaculture.


Assuntos
Doenças dos Peixes , Linguados , MicroRNAs , Vibrioses , Vibrio , Animais , Processamento Alternativo , Vibrio/fisiologia , Transcriptoma , Fígado/metabolismo , Peixes/genética , MicroRNAs/genética , MicroRNAs/metabolismo , Perfilação da Expressão Gênica/veterinária
4.
Fish Shellfish Immunol ; 151: 109706, 2024 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-38897310

RESUMO

The complement component 5a/complement component 5 receptor 1 (C5a/C5aR1) pathway plays a crucial role in the onset and development of inflammation, but relevant studies in fish are lacking. In this study, we successfully characterized the relationship between half-smooth tongue sole (Cynoglossus semilaevis) C5aR1 (CsC5aR1) and bacterial inflammation. First, we showed that the overexpression of CsC5aR1 significantly increased bacterial pathological damage in the liver and intestine, whereas inhibition attenuated the damage. The in vitro experiments suggested that CsC5aR1 was able to positively regulate the phagocytic activity and respiratory burst of tongue sole macrophages. In terms of both transcriptional and translational levels, overexpression/inhibition of CsC5aR1 was followed by a highly consistent up-regulation/decrease of its downstream canonical inflammatory factor interleukin-6 (CsIL-6). Furthermore, we stimulated macrophages by lipopolysaccharide (LPS) and lipoteichoic acid (LTA) and found a broad-spectrum response to bacterial infections by the C5a/C5aR1 complement pathway together with the downstream inflammatory factor CsIL-6. Subsequently, we directly elucidated that CsIL-6 is an indicator of C5a/C5aR1-mediated inflammation at different infection concentrations, different infectious bacteria (Vibrio anguillarum and Mycobacterium marinum), and different detection levels. These results might provide a new inflammation bio-marker for early warning of bacteria-induced hyperinflammation leading to fish mortality and a promising target for the treatment of bacterial inflammation in teleost.


Assuntos
Doenças dos Peixes , Proteínas de Peixes , Linguados , Interleucina-6 , Receptor da Anafilatoxina C5a , Animais , Linguados/imunologia , Linguados/genética , Receptor da Anafilatoxina C5a/genética , Receptor da Anafilatoxina C5a/imunologia , Doenças dos Peixes/imunologia , Doenças dos Peixes/microbiologia , Proteínas de Peixes/genética , Proteínas de Peixes/imunologia , Interleucina-6/genética , Interleucina-6/imunologia , Interleucina-6/metabolismo , Vibrioses/veterinária , Vibrioses/imunologia , Vibrio/fisiologia , Inflamação/imunologia , Inflamação/veterinária , Regulação da Expressão Gênica/imunologia , Imunidade Inata/genética
5.
Opt Express ; 31(13): 21280-21295, 2023 Jun 19.
Artigo em Inglês | MEDLINE | ID: mdl-37381231

RESUMO

We propose a miniaturized single-beam optically pumped magnetometer (OPM) with a laser power differential structure, along with a dynamically-adjusted detection circuit. This design enables the suppression of optical fluctuation noise and the enhancement of magnetometer sensitivity. For a single-beam OPM, pump light fluctuation noise is a significant contributor to output noise. To address this, we propose an OPM with a laser differential structure that separates the pump light as a part of the reference signal before it enters the cell. The reference current and OPM output current are then subtracted to suppress the noise introduced by pump light fluctuations. To achieve optimal optical noise suppression, we implement balanced homodyne detection (BHD) with real-time current adjustment, which dynamically adjusts the reference ratio between the two currents according to their amplitude. Ultimately, we can reduce the noise introduced by pump light fluctuations by 47% of the original. The OPM with laser power differential achieves a sensitivity of 17.5 fT/Hz1/2, with the optical fluctuation equivalent noise at 13 fT/Hz1/2.

6.
Fish Shellfish Immunol ; 139: 108873, 2023 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-37271327

RESUMO

The complement system is essential to host defense, but its excessive activation caused by severe pathogen invasion is a driving force in adverse inflammatory. The binding of complement component 5a (C5a) and complement component 5a receptor 1 (C5aR1) is the key to trigger complement-mediated inflammatory response in mammals. However, the role of C5a-C5aR1 axis in fish immune response remains obscure. In this study, the role of C5a-C5aR1 axis of zebrafish (Danio rerio) after serious infection with Aeromonas hydrophila was investigated. C5a and C5aR1 of zebrafish were cloned, with CDS sequences of 228 and 1041 bp, respectively, and they were widely expressed in various tissues with the highest expression in the liver and spleen, respectively. The survival of zebrafish was closely correlated to the dose of A. hydrophila. The cytokine storm occurred at high concentrations of A. hydrophila infection. At 24 h post infection (hpi), the expression of C5a and C5aR1 in the spleen increased 26.8-fold and 9.9-fold in treatment group 1 (TG1, 3.0 × 107 CFU/mL) (P < 0.01), and 4.7-fold and 3.4-fold in treatment group 2 (TG2, 1.0 × 107 CFU/mL) (P < 0.05), respectively. Correspondingly, proinflammatory cytokines interleukin-1ß (IL-1ß), interleukin-8 (IL-8), and interleukin-17 (IL-17) were positively correlated to C5a and C5aR1 at mRNA and protein expression levels. The expression of IL-1ß was significantly increased in the spleen at 6 hpi, with a 599.2-fold and 203.2-fold upregulation in TG1 and TG2 (P < 0.001), respectively. Moreover, after inhibition of C5a-C5aR1 binding treated with C5aR1 antagonist (W-54011), zebrafish showed lower expression of C5a, C5aR1, and cytokines, less intestinal damage, and significantly enhancement of survival (P < 0.05) after A. hydrophila challenge. This study revealed that the inflammatory effect of C5a was achieved by binding to C5aR1 in zebrafish, providing novel insights into using C5a-C5aR1 axis as an effective target to reduce bacterial inflammation and disease in fish.


Assuntos
Aeromonas hydrophila , Peixe-Zebra , Animais , Complemento C5a/metabolismo , Inflamação/genética , Citocinas/genética , Mamíferos/metabolismo
7.
J Sep Sci ; 44(18): 3506-3515, 2021 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-34268859

RESUMO

We wanted to explore a new method for the determination of monosaccharides in Polygonatum cyrtonema Hua polysaccharide using the ultra-high-performance liquid chromatography quadrupole trap tandem mass spectrometry. In this study, hydrochloric acid was used instead of trifluoroacetic acid to hydrolyze polysaccharides, and hydrolysis time was greatly reduced from 5-9 h to 1 h. The 1-phenyl-3-methyl-5-pyrazolone was used for pre-column derivatization of monosaccharides. The parameters of linearity (R2  > 0.999), stability (1.63-2.52%), intra-day and inter-day precision (0.69-0.95%, 1.81-2.77%), repeatability (1.89-2.65%), and recovery (97.63-102.24%) of the method were verified. Satisfactory validation results showed this method could be used to determine the target components. The results indicated the polysaccharide contained glucose, mannose, rhamnose, galactose, ribose, and arabinose. Technique for order preference by similarity to an ideal solution and principal component analysis were used to build an evaluation model based on the monosaccharide composition. The evaluation results showed that the samples from the Qingyang County of Anhui Province were the best when the monosaccharides were used as the evaluation index. Therefore, a new method was established to detect the monosaccharide content of polysaccharides from Polygonatum cyrtonema Hua and comprehensively evaluate the quality of Chinese medicines with polysaccharides as the main active ingredient.


Assuntos
Cromatografia Líquida de Alta Pressão/métodos , Monossacarídeos/análise , Polygonatum/química , Espectrometria de Massas em Tandem/métodos , Limite de Detecção , Modelos Lineares , Reprodutibilidade dos Testes
8.
Ecotoxicology ; 30(7): 1325-1332, 2021 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-33188492

RESUMO

Many organic pollutants attract public health concern due to their genotoxicity. To investigate the genotoxicity of organic matter in surface water of the Pearl River Delta (PRD). Organic substances of 24 samples (dry and wet season) from North River, West River and East River were extracted from 60 L source water by XAD-2 macroporous resin. DNA damage effect of organic extracts was tested in human derived liver cells (HL-7702), using single cell gel electrophoresis (SCGE) assay. The results showed that 100% organic extracts (24/24) could induce DNA damage in HL-7702 cells when the concentration was above 1.0 L surface water/ml culture, no significant difference of DNA damage between dry and wet seasons was observed. The organic substance-induced DNA damage in HL-7702 cells was significantly (P < 0.05) correlated with the contents of Dissolved Organic Carbon in both seasons and Total Suspended Solids in dry season. In conclusion, organic extracts induced genetic damage in HL-7702 cells, indicating potential genotoxicity of organic pollutants of surface water from PRD, South China.


Assuntos
Dano ao DNA , Rios , Poluentes Químicos da Água , Linhagem Celular , China , Monitoramento Ambiental , Humanos , Fígado/química , Estações do Ano , Água , Poluentes Químicos da Água/análise , Poluentes Químicos da Água/toxicidade
9.
Arch Microbiol ; 202(9): 2373-2378, 2020 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-32583126

RESUMO

A Gram-positive, endospore-forming, rod-shaped bacterium with a single flagellum, and a motile strain, designated CX253, was isolated from bioaerosols. The isolate is facultatively anaerobic, is able to grow at 25-45 â„ƒ (optimum 37 â„ƒ) and pH 6.5-10.0 (optimum 7.5), and can tolerate up to 5.0% NaCl (w/v) under aerobic conditions. The diagnostic diamino acid in the cell wall of strain CX253T is meso-diaminopimelic acid, while major isoprenoid quinone is menaquinone 6 (MK-6) along with a smaller amount of MK-7 (20%). The polar lipid profile is composed of diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, phospholipids and glycolipids. The major cellular fatty acid is iso-C15:0 and anteiso-C15:0. Phylogenetic analysis based on 16S rRNA gene and genome sequence grouped strain CX253T into the genus Bacillus. The strain was most closely related to Bacillus thermotolerans CCTCC AB 2012108 T by comparison of 16S rRNA gene sequence (97.2% similarity) and to Bacillus wudalianchiensis CCTCC AB 2015266 T by comparison of gyrB gene sequence (80.1% similarity). The draft genome of strain CX253T comprised 3,929,195 bp with a G + C content of 43.3 mol%. The average nucleotide identity and digital DNA-DNA hybridization values between strain CX253T and phylogenetically related Bacillus species were lower than 95% and 70%, respectively. Thus, the polyphasic evidence generated through phenotypic, chemotaxonomic and genomic methods confirmed that strain CX253T (= GDMCC 1.1608 T = KACC 21318 T) was a novel species of the genus Bacillus, for which the name Bacillus aerolatus sp. nov. is proposed.


Assuntos
Aerossóis , Bacillus/classificação , Microbiologia Ambiental , Bacillaceae/genética , Bacillus/genética , Bacillus/isolamento & purificação , Técnicas de Tipagem Bacteriana , Composição de Bases , Parede Celular/química , Ácido Diaminopimélico/análise , Ácidos Graxos/análise , Glicolipídeos/análise , Hibridização de Ácido Nucleico , Fosfolipídeos/análise , Filogenia , RNA Ribossômico 16S/genética , Especificidade da Espécie
10.
Glob Chang Biol ; 24(11): 5484-5499, 2018 11.
Artigo em Inglês | MEDLINE | ID: mdl-29963745

RESUMO

Global warming and human land management have greatly influenced vegetation growth through both changes in spring phenology and photosynthetic primary production. This will presumably impact the velocity of vegetation greenup (Vgreenup, the daily rate of changes in vegetation productivity during greenup period), yet little is currently known about the spatio-temporal patterns of Vgreenup of global vegetation. Here, we define Vgreenup as the ratio of the amplitude of greenup (Agreenup) to the duration of greenup (Dgreenup) and derive global Vgreenup from 34-year satellite leaf area index (LAI) observations to study spatio-temporal dynamics of Vgreenup at the global, hemispheric, and ecosystem scales. We find that 19.9% of the pixels analyzed (n = 1,175,453) experienced significant trends toward higher greenup rates by an average of 0.018 m2  m-2  day-1 for 1982-2015 as compared to 8.6% of pixels with significant negative trends (p < 0.05). Global distribution and dynamics of Vgreenup show high spatial heterogeneity and ecosystem-specific patterns, which is primarily determined by the high spatial variation in Agreenup, while the temporal dynamics of Vgreenup are directly controlled by both changes in Dgreenup and Agreenup. Areas with the largest Vgreenup and largest positive trends are both observed in deciduous and mixed forests as compared to nonforest ecosystems showing both lower Vgreenup and trends. For nonforest ecosystems, human-managed ecosystems (e.g., rangelands and rainfed croplands) exhibited higher Vgreenup and positive trends than those of natural counterparts, suggesting strong imprints of human land management on terrestrial ecosystem functioning. Globally, warming has accelerated Vgreenup in temperature-constrained high latitude forest ecosystems and arctic regions, but decelerated Vgreenup in temperate and arid/semiarid areas. These results suggest that the combined effects of climate change and human land management have greatly accelerated global vegetation greenup, with important implications for changes in terrestrial ecosystem functioning and global carbon cycling.


Assuntos
Agricultura , Mudança Climática , Agricultura Florestal , Desenvolvimento Vegetal , Urbanização , Humanos , Tecnologia de Sensoriamento Remoto
11.
Heredity (Edinb) ; 120(1): 83-89, 2018 01.
Artigo em Inglês | MEDLINE | ID: mdl-29234170

RESUMO

Disease-associated variants in the human genome are continually being identified using DNA sequencing technologies that are especially effective for Mendelian disorders. Here we sequenced whole genome to high coverage (>30×) of 6 members of a 7-generation family with dwarfism from a consanguineous tribe in Pakistan to determine the causal variant(s). We identified a missense variant rs111033552 (c.2011T>C [p.Ser671Pro]) located in COL10A1 (encodes the alpha chain of type X collagen) as the most likely contributor to the dwarfism. We further confirmed the variant in 22 family members using Sanger sequencing. All affected individuals are heterozygous for the missense mutation rs111033552 and no individual homozygous was observed. Moreover, the mutation was absent in 69,985 individuals representing >150 global populations. Taking advantage of whole-genome sequencing data, we also examined other variant forms, including copy number variation and insertion/deletion, but failed to identify such variants enriched in the affected individuals. Thus rs111033552 had priority for linkage with dwarfism.


Assuntos
Colágeno Tipo XI/genética , Nanismo/genética , Sequenciamento de Nucleotídeos em Larga Escala/métodos , Mutação de Sentido Incorreto , Mutação Puntual , Sequenciamento Completo do Genoma/métodos , Adolescente , Adulto , Sequência de Bases , Criança , Consanguinidade , Saúde da Família , Feminino , Predisposição Genética para Doença/genética , Heterozigoto , Humanos , Masculino , Pessoa de Meia-Idade , Paquistão , Linhagem , Polimorfismo de Nucleotídeo Único , Homologia de Sequência do Ácido Nucleico , Adulto Jovem
12.
J Med Genet ; 54(10): 685-692, 2017 10.
Artigo em Inglês | MEDLINE | ID: mdl-28705883

RESUMO

BACKGROUND: Copy number variation (CNV) is a valuable source of genetic diversity in the human genome and a well-recognised cause of various genetic diseases. However, CNVs have been considerably under-represented in population-based studies, particularly the Han Chinese which is the largest ethnic group in the world. OBJECTIVES: To build a representative CNV map for the Han Chinese population. METHODS: We conducted a genome-wide CNV study involving 451 male Han Chinese samples from 11 geographical regions encompassing 28 dialect groups, representing a less-biased panel compared with the currently available data. We detected CNVs by using 4.2M NimbleGen comparative genomic hybridisation array and whole-genome deep sequencing of 51 samples to optimise the filtering conditions in CNV discovery. RESULTS: A comprehensive Han Chinese CNV map was built based on a set of high-quality variants (positive predictive value >0.8, with sizes ranging from 369 bp to 4.16 Mb and a median of 5907 bp). The map consists of 4012 CNV regions (CNVRs), and more than half are novel to the 30 East Asian CNV Project and the 1000 Genomes Project Phase 3. We further identified 81 CNVRs specific to regional groups, which was indicative of the subpopulation structure within the Han Chinese population. CONCLUSIONS: Our data are complementary to public data sources, and the CNV map may facilitate in the identification of pathogenic CNVs and further biomedical research studies involving the Han Chinese population.


Assuntos
Povo Asiático/genética , Variações do Número de Cópias de DNA , Etnicidade/genética , Variação Genética , Genoma Humano , China , Humanos , Masculino
13.
Front Public Health ; 12: 1280163, 2024.
Artigo em Inglês | MEDLINE | ID: mdl-38435294

RESUMO

Background: The relationships between heavy metals and fatty liver, especially the threshold values, have not been fully elucidated. The objective of this research was to further investigate the correlation between blood heavy metal exposures and the risk of Metabolic dysfunction Associated Fatty Liver Disease (MAFLD) in adults. Methods: Laboratory data on blood metal exposure levels were obtained from National Health and Nutrition Examination Survey (NHANES) data for the period 2015 to 2020 for a cross-sectional study in adults. Associations between blood levels of common heavy metals and the risk of MAFLD in adults were analyzed using multifactorial logistic regression and ranked for heavy metal importance using a random forest model. Finally, thresholds for important heavy metals were calculated using piecewise linear regression model. Results: In a multifactorial logistic regression model, we found that elevated levels of selenium (Se) and manganese (Mn) blood exposure were strongly associated with the risk of MAFLD in adults. The random forest model importance ranking also found that Se and Mn blood exposure levels were in the top two positions of importance for the risk of disease in adults. The restricted cubic spline suggested a non-linear relationship between Se and Mn blood exposure and adult risk of disease. The OR (95% CI) for MAFLD prevalence was 3.936 (2.631-5.887) for every 1 unit increase in Log Mn until serum Mn levels rose to the turning point (Log Mn = 1.10, Mn = 12.61 µg/L). This correlation was not significant (p > 0.05) after serum Mn levels rose to the turning point. A similar phenomenon was observed for serum Se levels, with a turning point of (Log Se = 2.30, Se = 199.55 µg/L). Conclusion: Blood heavy metals, especially Se and Mn, are significantly associated with MAFLD in adults. They have a non-linear relationship with a clear threshold.


Assuntos
Metais Pesados , Hepatopatia Gordurosa não Alcoólica , Selênio , Adulto , Humanos , Estudos Transversais , Inquéritos Nutricionais , Metais Pesados/efeitos adversos
14.
J Imaging ; 10(3)2024 Feb 28.
Artigo em Inglês | MEDLINE | ID: mdl-38535139

RESUMO

Personal privacy protection has been extensively investigated. The privacy protection of face recognition applications combines face privacy protection with face recognition. Traditional face privacy-protection methods encrypt or perturb facial images for protection. However, the original facial images or parameters need to be restored during recognition. In this paper, it is found that faces can still be recognized correctly when only some of the high-order and local feature information from faces is retained, while the rest of the information is fuzzed. Based on this, a privacy-preserving face recognition method combining random convolution and self-learning batch normalization is proposed. This method generates a privacy-preserved scrambled facial image and an image fuzzy degree that is close to an encryption of the image. The server directly recognizes the scrambled facial image, and the recognition accuracy is equivalent to that of the normal facial image. The method ensures the revocability and irreversibility of the privacy preserving of faces at the same time. In this experiment, the proposed method is tested on the LFW, Celeba, and self-collected face datasets. On the three datasets, the proposed method outperforms the existing face privacy-preserving recognition methods in terms of face visual information elimination and recognition accuracy. The recognition accuracy is >99%, and the visual information elimination is close to an encryption effect.

15.
Sci Total Environ ; 942: 173427, 2024 Sep 10.
Artigo em Inglês | MEDLINE | ID: mdl-38797400

RESUMO

The recurring appearance of Ulva prolifera green tides has become a pressing environmental issue, especially for marine transportation, tourism, and aquaculture in the stage of decomposition. An abundance of decaying U. prolifera leads to water acidification, hypoxia and pathogenic microorganism proliferation, threatening marine germplasm resources, particularly benthic organisms with weak escape ability. Epigenetic modification is considered to be one of the molecular mechanisms involved in the plastic adaptive response to environmental changes. However, few studies concerning the specific impact of decaying green tide on benthic animals at the epigenetic level. In this study, decomposing algal effluents of U. prolifera, sediments containing uncorrupted U. prolifera, pathogenic microorganism were considered as impact factors, to reveal the effect of decaying U. prolifera on marine economic benthic species, Paralichthys olivaceus, using both field and laboratory simulation experiments. Field simulation experiment showed higher mortality rates and serious histopathological damage than the laboratory simulation experiment. And both the decaying U. prolifera and the sediment containing U. prolifera were harmful to P. olivaceus. Genome-wide DNA methylation and transcription correlation analyses showed that the response of P. olivaceus to green tide stress and bacterial infection was mainly mediated by immune signaling pathways such as PI3K-Akt signaling pathway. DNA methylation regulates the expression of immune-related genes involved in the PI3K-Akt signaling pathway, which enables P. olivaceus to adapt to the adverse environmental stresses by resisting apoptosis. In summary, this research analyzed the potential role of P. olivaceus in decaying U. prolifera, which is of great significance for understanding the impact of decaying green tide on marine commercial fish and also provides some theoretical guidance for the proliferation and release of fish seedlings.


Assuntos
Metilação de DNA , Ulva , Animais , Linguados/genética , Expressão Gênica , Doenças dos Peixes/microbiologia
16.
Scand J Gastroenterol ; 48(9): 1055-65, 2013 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-23862765

RESUMO

OBJECTIVE: To investigate discovered on gastrointestinal stromal tumor (GIST)-1 (DOG-1) and protein kinase C-θ (PKC-θ) expression in a series of GISTs and determine the sensitivity, specificity, and diagnostic value of these two antigens. METHODS: Immnunohistochemistry (IHC) was used to detect CD117, DOG-1, PKC-θ, CD34, Ki-67, α-smooth muscle actin (SMA), S100, and Desmin expression in 147 GISTs and 51 non-GISTs. c-Kit gene (exons 9, 11, 13, and 17) and platelet-derived growth factor receptor-alpha (PDGFRA) gene (exons 12 and 18) mutations were also detected. RESULTS: About 94.5% GISTs were CD117 positive, 96% were DOG-1 positive, and 90.5% were PKC-θ positive. DOG-1 had a specificity of 100%, while CD117 and PKC-θ had a specificity of 90% and 80%, respectively. There was no significant difference between DOG-1 and PKC-θ expressions when compared to CD117 expression. In 30 out of 42 (71.5%) GISTs, a c-Kit gene mutation was found, and in 3 out of 42 cases (7%), PDGFRA was mutated. Wild-type c-Kit/PDGFRA genes accounted for 21.5% (9/42). Most c-Kit gene mutations were found to be located at exon 11, mainly as in-frame deletions. Mutations in exon 9 were all missense mutations. Most PDGFRA gene mutations were found in exon 18, codon 842. c-Kit gene mutations in exons 13 and 17, and the PDGFRA gene mutation in exon 12 were not detected. CONCLUSIONS: Compared to CD117, DOG-1 is a biomarker with higher sensitivity and specificity. The combination of CD117 and DOG-1 can be used to improve the diagnosis of GIST. Although PKC-θ has a lower specificity than DOG-1, it can be a useful biomarker, especially in CD117(-) and/or DOG-1(-) cases.


Assuntos
Biomarcadores Tumorais/análise , Canais de Cloreto/análise , Neoplasias Gastrointestinais/genética , Tumores do Estroma Gastrointestinal/genética , Isoenzimas/análise , Proteínas de Neoplasias/análise , Proteína Quinase C/análise , Proteínas Proto-Oncogênicas c-kit/genética , Receptor alfa de Fator de Crescimento Derivado de Plaquetas/genética , Actinas/análise , Adulto , Anoctamina-1 , Antígenos CD34/análise , Biomarcadores Tumorais/genética , Desmina/análise , Éxons , Feminino , Neoplasias Gastrointestinais/química , Neoplasias Gastrointestinais/diagnóstico , Tumores do Estroma Gastrointestinal/química , Tumores do Estroma Gastrointestinal/diagnóstico , Humanos , Antígeno Ki-67/análise , Masculino , Pessoa de Meia-Idade , Mutação de Sentido Incorreto , Proteína Quinase C-theta , Proteínas Proto-Oncogênicas c-kit/análise , Proteínas S100/análise , Sensibilidade e Especificidade
17.
Sci Total Environ ; 868: 161646, 2023 Apr 10.
Artigo em Inglês | MEDLINE | ID: mdl-36657681

RESUMO

Metal oxides have remained state-of-the-art adsorbents for recovering phosphorus from aqueous solutions, but their practical application is still limited by their unsatisfactory adsorption capacities and selectivities in wastewater. Here, using MgO as a model metal oxide, the strategy of employing porous cellulose sponge to support metal oxides featuring exposed specific crystal facets was proposed to develop promising phosphate adsorbents. The phosphate adsorption isotherms and kinetics were measured and the phosphate adsorption mechanism was explored. The results show that cellulose sponge-supported MgO(100) (C-MgO(100)) has a saturation capacity of 28.3 mg P/g, over ten times higher than MgO(100) particles. Importantly, the phosphate adsorption properties of C-MgO(100) are almost not affected in wastewater, demonstrating its exceptional selectivity for phosphate adsorption. In contrast, the saturation capacity of MgO(111)-functionalized cellulose sponge is obviously declined in wastewater. Experimental together with theoretical analyses indicate that phosphate is chemically adsorbed on C-MgO(100) with obvious electrons transfer from the p-orbital of phosphate, and the adsorption energy of C-MgO(100) towards phosphate is maintained in the presence of coexisting anions. Ultimately, regeneration experiments reveal that a regenerant formulation composed of KOH (wt.1 %) and tap water is suitable for the regeneration of C-MgO(100) with >82.6 % phosphate desorption efficiencies after 5 cycles, further confirming its potential in practical application for the treatment of real water.

18.
PLoS One ; 18(8): e0290605, 2023.
Artigo em Inglês | MEDLINE | ID: mdl-37651363

RESUMO

Polygonatum cyrtonema Hua is a perennial herbaceous plant of the Polygonatum genus, belonging to the Liliaceae family, with significant medicinal and nutritional value. In China, this species is a traditional medicinal and edible herb with a long history of application and is widely appreciated by the people. However, as the demand for medicinal herbs continues to grow, excessive harvesting has led to the depletion of wild resources and the risk of genetic erosion. In addition, the chaotic cultivation of varieties and the lack of high quality germplasm resources have led to inconsistent quality of medical materials. Therefore, it is urgent to conduct genetic diversity evaluation of this species and establish a sound conservation plan. This study assessed the genetic diversity and population structure of 96 samples collected from seven regions in China using the simple sequence repeat (SSR) molecular marker technology. In this study, a total of 60 alleles (Na) were detected across the 10 polymorphic SSR markers used, with an average of 6.0 alleles generated per locus. The values of polymorphic information content (PIC) values ranged from 0.3396 to 0.8794, with an average value of 0.6430. The average value of the effective number of alleles (Ne) was 2.761, and the average value of the Shannon's information index (I) was 1.196. The population structure analysis indicates that the Polygonatum cyrtonema Hua germplasm can be classified into three subpopulations (JZ, QY, JD) at the molecular level, which corresponds to the previous subgroups identified based on individual plant phenotypic traits. Analysis of Molecular Variance (AMOVA) showed that 74% of the genetic variation was between individuals within populations in different regions. The phylogenetic analysis of the 96 germplasm samples divided them into three main populations. The QY and JD subpopulations are largely clustered together, which could be attributed to their mountainous distribution and the local climate environment. The genetic differentiation coefficient (Fst) value was low at 0.065, indicating relatively low population differentiation. The ratio of the genetic differentiation coefficient (Fst) between the JZ population and the other two populations (QY and JD) is much higher than the ratio between the QY and JD populations. Based on the clustering results and the ratio of the genetic differentiation coefficient (Fst), it can be inferred that the genetic relationship between the QY and JD subpopulations is closer, with a certain degree of genetic differentiation from the JZ subpopulation. This study supports the conservation of germplasm resources of Polygonatum cyrtonema Hua in China and provides new parental material for germplasm genetic improvement and breeding programs.


Assuntos
Polygonatum , Humanos , Polygonatum/genética , Filogenia , Melhoramento Vegetal , China , Repetições de Microssatélites/genética , Variação Genética
19.
Int J Biol Macromol ; 252: 126445, 2023 Dec 01.
Artigo em Inglês | MEDLINE | ID: mdl-37611685

RESUMO

MicroRNAs (miRNAs) are small non-coding RNAs involved in various biological processes, including immunity. Previously, we investigated the miRNAs of half-smooth tongue sole (Cynoglossus semilaevis) and found that miR-722 (designated Cse-miR-722) was significantly differentially expressed after infection with Vibrio anguillarum, reflecting its importance in immune response. Our preliminary bioinformatic analysis suggested that Cse-miR-722 could target C5aR1 (designated CsC5aR1), which was known to play crucial roles in complement activation and inflammatory response, as a receptor of C5a. However, the underlying mechanisms of their interactions and specific functions in inflammatory and immune response are still enigmas. In this study, we successfully cloned the precursor sequence of Cse-miR-722 (94 bp) and the full length of CsC5aR1 (1541 bp, protein molecular weight 39 kDa). The target gene of Cse-miR-722 was verified as CsC5aR1 by a dual luciferase reporter assay, and Cse-miR-722 was confirmed to regulate CsC5aR1 at the protein level using quantitative real-time polymerase chain reaction (qRT-PCR) and Western blotting. The expression of CsC5aR1 and Cse-miR-722 in liver cells and four immune tissues of half-smooth tongue sole changed significantly after LPS stimulation and infection with V. anguillarum. To explore the functional role of Cse-miR-722 in half-smooth tongue sole, we performed both in vitro and in vivo experiments. Cse-miR-722 was observed to affect phagocytosis and respiratory burst activity of macrophages by regulating CsC5aR1 in half-smooth tongue sole. Furthermore, we found that Cse-miR-722 regulated the expression of CsC5aR1, CsC5a, and the inflammatory factors CsIL1-ß, CsIL6, CsIL8, and CsTNF-α both in vitro and in vivo. In addition, Cse-miR-722 reduced mortality and pathological damage. This study clarified the regulatory mechanism of Cse-miR-722 on CsC5aR1 and provided insight into the regulatory roles of Cse-miR-722 in immune responses, laying a theoretical foundation for the feasibility of using miR-722 to prevent and control bacterial diseases in teleost.


Assuntos
Infecções Bacterianas , Doenças dos Peixes , Linguados , MicroRNAs , Vibrioses , Vibrio , Animais , Linguados/genética , Inflamação , MicroRNAs/genética , Proteínas de Peixes/metabolismo
20.
Mol Biotechnol ; 64(9): 1045-1054, 2022 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-35394254

RESUMO

Atherosclerosis (AS) is a chronic and progressive inflammatory disease. Ubiquitin-conjugating enzyme E2G 2 (UBE2G2) has been reported to be differentially expressed in subjects with abnormal coronary endothelial function. We intended to further explore the effect of UBE2G2 in AS using apolipoprotein E-deficient (ApoE-/-) mice. Relative UBE2G2 expression in aortic sinus tissues was examined by Real-time reverse transcriptase-polymerase chain reaction and immunohistochemical staining. Atherosclerotic plaque formation was observed through hematoxylin-eosin staining. The protein levels of adhesion biomarkers and inflammatory cytokines was analyzed by western blotting. The direct interaction between UBE2G2 and miR-204-5p was predicted by bioinformatic analysis, and the correlation was analyzed by Pearson's correlation test, and verified by luciferase reporter assay. Human vascular smooth muscle cells (VSMCs) development was detected by 5-ethynyl-2'-deoxyuridine labeling assay and wound healing assays. UBE2G2 was highly expressed in the aortic sinus tissues of high-fat diet-fed ApoE-/- mice. The atherosclerotic plaque formation was increased in ApoE-/- mice, while UBE2G2 knockdown reduced it. Silencing of UBE2G2 also inhibited the expression and protein levels of adhesion biomarkers and inflammatory cytokines in ApoE-/- mice. MiR-204-5p was the upstream effector of UBE2G2 and miR-204-5p overexpression was found to inhibit the proliferation and migration of human VSMCs through regulating UBE2G2 expression. UBE2G2 inhibition attenuated AS in ApoE-/- mice and UBE2G2 expression was negatively regulated by miR-204-5p in human VSMCs.


Assuntos
Aterosclerose , MicroRNAs , Placa Aterosclerótica , Animais , Apolipoproteínas E/genética , Aterosclerose/genética , Movimento Celular , Proliferação de Células/genética , Células Cultivadas , Citocinas , Humanos , Camundongos , MicroRNAs/genética , MicroRNAs/metabolismo , Placa Aterosclerótica/genética , Enzimas de Conjugação de Ubiquitina/genética
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