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1.
Plant Physiol ; 2024 Apr 30.
Artigo em Inglês | MEDLINE | ID: mdl-38687884

RESUMO

Plant nucleotide-binding leucine-rich repeat receptors (NLRs) sense pathogen effectors and activate effector-triggered immunity (ETI). Many plant NLRs form pairs with other NLRs to recognize effectors and initiate ETI. PIRICULARIA ORYZAE RESISTANCE IN BL1 (Pib), an NLR protein in rice (Oryza sativa), activates resistance by recognizing the rice blast effector AvrPib. The activation of Pib is suppressed by SH3 DOMAIN-CONTAINING PROTEIN 2 (OsSH3P2) in the absence of AvrPib. However, how Pib triggers defense responses and whether Pib pairs with another NLR are not clear. In this study, we identified Pib by map-based cloning and showed that a homolog of Pib, PIB HOMOLOGUE 8 (PibH8), interacts with Pib. Pib and PibH8 mediate resistance to the Magnaporthe oryzae isolate Guy11, a rice blast strain carrying AvrPib. Interestingly, the pib/pibh8 double mutant exhibited enhanced susceptibility to Guy11 compared to the single mutant. Furthermore, PibH8 can oligomerize through its coiled-coil (CC) domain, which also contributes to the Pib-PibH8 interaction, suggesting that Pib and PibH8 may form a complex to recognize AvrPib. OsSH3P2 inhibited the interaction of Pib and PibH8 through association with the CC domain of PibH8. Taken together, these results indicate that both Pib and PibH8 are required for rice blast resistance to M. oryzae carrying AvrPib, which is negatively regulated by OsSH3P2. This study not only identifies an NLR that functions in rice blast resistance but also reveals a possible complex immune strategy in which homologous NLR proteins may regulate the complete activation of plant immunity.

2.
BMC Plant Biol ; 24(1): 145, 2024 Feb 28.
Artigo em Inglês | MEDLINE | ID: mdl-38413866

RESUMO

BACKGROUND: Alternative polyadenylation (APA) is an important pattern of post-transcriptional regulation of genes widely existing in eukaryotes, involving plant physiological and pathological processes. However, there is a dearth of studies investigating the role of APA profile in rice leaf blight. RESULTS: In this study, we compared the APA profile of leaf blight-susceptible varieties (CT 9737-613P-M) and resistant varieties (NSIC RC154) following bacterial blight infection. Through gene enrichment analysis, we found that the genes of two varieties typically exhibited distal poly(A) (PA) sites that play different roles in two kinds of rice, indicating differential APA regulatory mechanisms. In this process, many disease-resistance genes displayed multiple transcripts via APA. Moreover, we also found five polyadenylation factors of similar expression patterns of rice, highlighting the critical roles of these five factors in rice response to leaf blight about PA locus diversity. CONCLUSION: Notably, the present study provides the first dynamic changes of APA in rice in early response to biotic stresses and proposes a possible functional conjecture of APA in plant immune response, which lays the theoretical foundation for in-depth determination of the role of APA events in plant stress response and other life processes.


Assuntos
Oryza , Xanthomonas , RNA-Seq , Oryza/metabolismo , Poliadenilação/genética , Resistência à Doença/genética , Estresse Fisiológico , Xanthomonas/fisiologia , Doenças das Plantas/microbiologia , Regulação da Expressão Gênica de Plantas
3.
J Exp Bot ; 75(5): 1565-1579, 2024 Feb 28.
Artigo em Inglês | MEDLINE | ID: mdl-37976240

RESUMO

Receptor-like kinases (RLKs) are major regulators of the plant immune response and play important roles in the perception and transmission of immune signals. RECEPTOR LIKE KINASE 902 (RLK902) is at the key node in leucine-rich repeat receptor-like kinase interaction networks and positively regulates resistance to the bacterial pathogen Pseudomonas syringae in Arabidopsis. However, the function of RLK902 in fungal disease resistance remains obscure. In this study, we found that the expression levels of OsRLK902-1 and OsRLK902-2, encoding two orthologues of RLK902 in rice, were induced by Magnaporthe oryzae, chitin, and flg22 treatment. osrlk902-1 and osrlk902-2 knockout mutants displayed enhanced susceptibility to M. oryzae. Interestingly, the osrlk902-1 rlk902-2 double mutant exhibited similar disease susceptibility, hydrogen peroxide production, and callose deposition to the two single mutants. Further investigation showed that OsRLK902-1 interacts with and stabilizes OsRLK902-2. The two OsRLKs form a complex with OsRLCK185, a key regulator in chitin-triggered immunity, and stabilize it. Taken together, our data demonstrate that OsRLK902-1 and OsRLK902-2, as well as OsRLCK185 function together in regulating disease resistance to M. oryzae in rice.


Assuntos
Proteínas de Arabidopsis , Arabidopsis , Magnaporthe , Oryza , Resistência à Doença/genética , Complexo Antígeno-Anticorpo/metabolismo , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Arabidopsis/metabolismo , Quitina/metabolismo , Oryza/metabolismo , Doenças das Plantas/microbiologia , Magnaporthe/fisiologia , Proteínas Quinases/metabolismo , Proteínas de Arabidopsis/metabolismo
4.
BMC Plant Biol ; 23(1): 205, 2023 Apr 20.
Artigo em Inglês | MEDLINE | ID: mdl-37081397

RESUMO

BACKGROUND: The architecture of inflorescence in crops is a key agronomic feature determining grain yield and thus has been a major target trait of cereal domestication. RESULTS: In this study, we show that a simple spreading panicle change in rice panicle shape, controlled by the Spreading Panicle 9 (SPR9) locus, also has a significant impact on the resistance to rice false smut (RFS). Meanwhile, we mapped a novel spr9 mutant gene between markers Indel5-18 and Indel5-22 encompassing a genomic region of 43-kb with six candidate genes. Through gene prediction and cDNA sequencing, we confirmed that LOC_Os05g38520 is the target gene in the spr9 mutant, which encodes 60 S ribosomal protein L36-2. Further analysis showed that the spr9 mutant is caused by a 1 bp deletion in the first exon that resulted in premature termination. Knockout experiments showed that the SPR9 gene is responsible for the spreading panicle phenotype of the spr9 mutant. Interestingly, the spr9 mutant was found to improve resistance to RFS without affecting major agronomic traits. Taken together, our results revealed that the spr9 allele has good application prospects in rice breeding for disease resistance and panicle improvement. CONCLUSIONS: We report the map-based cloning and functional characterization of SPR9, which encodes a 60 S ribosomal protein that regulates spreading panicles and affects the resistance to false smut in rice.


Assuntos
Oryza , Oryza/genética , Oryza/metabolismo , Proteínas Ribossômicas/genética , Proteínas Ribossômicas/metabolismo , Melhoramento Vegetal , Inflorescência/genética , Fenótipo , Grão Comestível
5.
Int J Mol Sci ; 24(2)2023 Jan 04.
Artigo em Inglês | MEDLINE | ID: mdl-36674482

RESUMO

Ratooning ability is a key factor that influences the ratoon rice yield in areas where light and temperature are not sufficient for second-season rice. Near-isogenic lines (NILs) are the most powerful tools for the detection and precise mapping of quantitative trait loci (QTLs). In this study, using 176 NILs, we identified a novel QTL for ratooning ability in NIL128. First, we mapped the QTL between the markers Indel12-29 and Indel12-31, which encompass a region of 233 kb. The rice genome annotation indicated the existence of three candidate genes in this region that may be related to ratooning ability. Through gene prediction and cDNA sequencing, we speculated that the target gene of ratooning ability is LOC_Os02g51930 which encodes cytokinin glucosyl transferases (CGTs), hereafter named qRA2. Further analysis showed that qra2 was a 1-bp substitution in the first exon in NIL128, which resulted in the premature termination of qRA2. The results of the knockdown experiment showed that the Jiafuzhan knockdown mutants exhibited the ratooning ability phenotype of NIL128. Interestingly, the qRA2 gene was found to improve ratooning ability without affecting major agronomic traits. These results will help us better understand the genetic basis of rice ratooning ability and provide a valuable gene resource for breeding strong ratoon rice varieties.


Assuntos
Oryza , Mapeamento Cromossômico , Oryza/genética , Melhoramento Vegetal , Locos de Características Quantitativas , Fenótipo , Clonagem Molecular
6.
Plant Physiol ; 187(4): 2852-2864, 2021 12 04.
Artigo em Inglês | MEDLINE | ID: mdl-34597396

RESUMO

Resistance (R) proteins are important components of plant innate immunity. Most known R proteins are nucleotide-binding site leucine-rich repeat (NLR) proteins. Although a number of signaling components downstream of NLRs have been identified, we lack a general understanding of the signaling pathways. Here, we used the interaction between rice (Oryza sativa) and Magnaporthe oryzae to study signaling of rice NLRs in response to blast infection. We found that in blast resistance mediated by the NLR PIRICULARIA ORYZAE RESISTANCE IN DIGU 3 (PID3), the guanine nucleotide exchange factor OsSPK1 works downstream of PID3. OsSPK1 activates the small GTPase OsRac1, which in turn transduces the signal to the transcription factor RAC IMMUNITY1 (RAI1). Further investigation revealed that the three signaling components also play important roles in disease resistance mediated by the distantly related NLR protein Pi9, suggesting that the OsSPK1-OsRac1-RAI1 signaling pathway could be conserved across rice NLR-induced blast resistance. In addition, we observed changes in RAI1 levels during blast infection, which led to identification of OsRPT2a, a subunit of the 19S regulatory particle of the 26S proteasome. OsRPT2a seemed to be responsible for RAI1 turnover in a 26S proteasome-dependent manner. Collectively, our results suggest a defense signaling route that might be common to NLR proteins in response to blast infection.


Assuntos
Magnaporthe/fisiologia , Proteínas NLR/genética , Oryza/genética , Doenças das Plantas/genética , Imunidade Vegetal/genética , Transdução de Sinais , Resistência à Doença/genética , Proteínas NLR/metabolismo , Oryza/microbiologia , Doenças das Plantas/microbiologia
7.
Plant Cell Environ ; 45(4): 1065-1081, 2022 04.
Artigo em Inglês | MEDLINE | ID: mdl-35129212

RESUMO

Various types of transcription factors have been reported to be involved in plant-pathogen interactions by regulating defence-related genes. GRAS proteins, plant- specific transcription factors, have been shown to play essential roles in plant growth, development and stress responses. By performing a transcriptome study on rice early defence responses to Magnaporthe oryzae, we identified a GRAS protein, OsSCL7, which was induced by M. oryzae infection. We characterized the function of OsSCL7 in rice disease resistance. OsSCL7 was upregulated upon exposure to M. oryzae and pathogen-associated molecular pattern treatments, and knocking out OsSCL7 resulted in decreased disease resistance of rice to M. oryzae. In contrast, overexpression of OsSCL7 could improve rice disease resistance to M. oryzae. OsSCL7 was mainly localized in the nucleus and showed transcriptional activity. OsSCL7 can interact with GF14c, a 14-3-3 protein, and loss-of-function GF14c leads to enhanced susceptibility to M. oryzae. Additionally, OsSCL7 protein levels were reduced in the gf14c mutant and knocking out OsSCL7 affected the expression of a series of defence-related genes. Taken together, these findings uncover the important roles of OsSCL7 and GF14c in plant immunity and a potential mechanism by which plants fine-tune immunity by regulating the protein stability of a GRAS protein via a 14-3-3 protein.


Assuntos
Magnaporthe , Oryza , Proteínas 14-3-3/genética , Proteínas 14-3-3/metabolismo , Resistência à Doença/genética , Regulação da Expressão Gênica de Plantas , Magnaporthe/metabolismo , Oryza/metabolismo , Doenças das Plantas , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Proteostase , Fatores de Transcrição/genética , Fatores de Transcrição/metabolismo
8.
Surg Endosc ; 36(8): 6113-6121, 2022 08.
Artigo em Inglês | MEDLINE | ID: mdl-35737138

RESUMO

BACKGROUND: Due to varied surgical skills and the lack of an efficient rating system, we developed Surgesture based on elementary functional surgical gestures performed by surgeons, which could serve as objective metrics to evaluate surgical performance in laparoscopic cholecystectomy (LC). METHODS: We defined 14 LC basic Surgestures. Four surgeons annotated Surgestures among LC videos performed by experts and novices. The counts, durations, average action time, and dissection/exposure ratio (D/E ratio) of LC Surgestures were compared. The phase of mobilizing hepatocystic triangle (MHT) was extracted for skill assessment by three professors using a modified Global Operative Assessment of Laparoscopic Skills (mGOALS). RESULTS: The novice operation time was significantly longer than the expert operation time (58.12 ± 19.23 min vs. 26.66 ± 8.00 min, P < 0.001), particularly during MHT phase. Novices had significantly more Surgestures than experts in both hands (P < 0.05). The left hand and inefficient Surgesture of novices were dramatically more than those of experts (P < 0.05). The experts demonstrated a significantly higher D/E ratio of duration than novices (0.79 ± 0.37 vs. 2.84 ± 1.98, P < 0.001). The counts and time pattern map of LC Surgestures during MHT demonstrated that novices tended to complete LC with more types of Surgestures and spent more time exposing the surgical scene. The performance metrics of LC Surgesture had significant but weak associations with each aspect of mGOALS. CONCLUSION: The newly constructed Surgestures could serve as accessible and quantifiable metrics for demonstrating the operative pattern and distinguishing surgeons with various skills. The association between Surgestures and Global Rating Scale laid the foundation for establishing a bridge to automated objective surgical skill evaluation.


Assuntos
Colecistectomia Laparoscópica , Laparoscopia , Cirurgiões , Competência Clínica , Humanos , Laparoscopia/métodos , Duração da Cirurgia
9.
Sensors (Basel) ; 22(22)2022 Nov 21.
Artigo em Inglês | MEDLINE | ID: mdl-36433608

RESUMO

The inertial measurement unit (IMU)-to-segment (I2S) alignment is an important part of IMU-based joint angle estimation, and the accurate estimation of the three degree of freedom (3-DOF) knee angle can provide practical support for the evaluation of motions. In this paper, we introduce a dynamic weight particle swarm optimization (DPSO) algorithm with crossover factor based on the joint constraint to obtain the dynamic alignment vectors of I2S, and use them to perform the quaternion-based 3-DOF knee angle estimation algorithm. The optimization algorithm and the joint angle estimation algorithm were evaluated by comparing with the optical motion capture system. The range of 3-DOF knee angle root mean square errors (RMSEs) is 1.6°-5.9° during different motions. Furthermore, we also set up experiments of human walking (3 km/h), jogging (6 km/h) and ordinary running (9 km/h) to investigate the effects of dynamic I2S misalignment errors on 3-DOF knee angle estimation during different motions by artificially adding errors to I2S alignment parameters. The results showed differences in the effects of I2S misalignment errors on the estimation of knee abduction, internal rotation and flexion, which indicate the differences in knee joint kinematics among different motions. The IMU to thigh misalignment error has the greatest effect on the estimation of knee internal rotation. The effect of IMU to thigh misalignment error on the estimation of knee abduction angle becomes smaller and then larger during the two processes of switching from walking to jogging and then speeding up to ordinary running. The effect of IMU to shank misalignment error on the estimation of knee flexion angle is numerically the largest, while the standard deviation (SD) is the smallest. This study can provide support for future research on the accuracy of 3-DOF knee angle estimation during different motions.


Assuntos
Articulação do Joelho , Corrida , Humanos , Caminhada , Fenômenos Biomecânicos , Amplitude de Movimento Articular
10.
Int J Mol Sci ; 23(12)2022 Jun 14.
Artigo em Inglês | MEDLINE | ID: mdl-35743071

RESUMO

Lignin, a by-product of pulping and biorefinery, has great potential to replace petrochemical resources for wastewater purification. However, the defects of lignin, such as severe heterogeneity, inferior reactivity and poor solubility, characterize the production process of lignin-based products by high energy consumption and serious pollution. In this study, several lignin fractions with relatively homogeneous structure were first obtained by organic solvent fractionation, and their structures were fully deciphered by various characterization techniques. Subsequently, each lignin component was custom-valued for wastewater purification based on their structural characteristics. Benefiting from the high reactivity and reaction accessibility, the lignin fraction (lignin-1) refined by dissolving in ethanol and n-butanol could been used as a raw material to produce cationic lignin-based flocculant (LBF) in a copolymerization system using green, cheap and recyclable ethanol as solvent. The lignin fraction (lignin-2) extracted by methanol and dioxane showed low reactivity and high carbon content, which was used to produce lignin-based activated carbon (LAC) with phosphoric acid as activator. Moreover, the influences of synthetic factors on the purification capacity were discussed, and the LBF and LAC produced under the optimal conditions showed distinguished purification effect on kaolin suspension and heavy metal wastewater, respectively. Furthermore, the corresponding purification mechanism and external factors were also elaborated. It is believed that this cleaner production strategy is helpful for the valorization of lignin in wastewater resources.


Assuntos
Lignina , Purificação da Água , Etanol , Lignina/química , Solventes , Águas Residuárias
11.
Plant Cell Environ ; 44(9): 3103-3121, 2021 09.
Artigo em Inglês | MEDLINE | ID: mdl-33993496

RESUMO

Rice blast disease caused by the filamentous Ascomycetous fungus Magnaporthe oryzae is a major threat to rice production worldwide. The mechanisms underlying rice resistance to M. oryzae, such as transcriptional reprogramming and signalling networks, remain elusive. In this study, we carried out an in-depth comparative transcriptome study on the susceptible and resistant rice cultivars in response to M. oryzae. Our analysis highlighted that rapid, high-amplitude transcriptional reprogramming was important for rice defence against blast fungus. Ribosome- and protein translation-related genes were significantly enriched among differentially expressed genes (DEGs) at 12 hpi in both cultivars, indicating that the protein translation machinery is regulated in the activation of immunity in rice. Furthermore, we identified a core set of genes that are involved in the rice response to both biotic and abiotic stress. More importantly, among the core genes, we demonstrated that the metallothionein OsMT1a and OsMT1b genes positively regulated rice resistance while a peroxidase gene Perox4 negatively regulated rice resistance to M. oryzae. Our study provides novel insight into transcriptional reprogramming and serves as a valuable resource for functional studies on rice immune signalling components in resistance to blast disease.


Assuntos
Ascomicetos , Oryza/imunologia , Doenças das Plantas/imunologia , Resistência à Doença/genética , Perfilação da Expressão Gênica , Regulação da Expressão Gênica de Plantas , Genes de Plantas , Oryza/genética , Oryza/microbiologia , Doenças das Plantas/microbiologia
12.
J Environ Sci (China) ; 102: 85-98, 2021 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-33637268

RESUMO

The potential for mitigating climate change is growing worldwide, with an increasing emphasis on reducing CO2 emissions and minimising the impact on the environment. African continent is faced with the unique challenge of climate change whilst coping with extreme poverty, explosive population growth and economic difficulties. CO2 emission patterns in Africa are analysed in this study to understand primary CO2 sources and underlying driving forces further. Data are examined using gravity model, logarithmic mean divisia index and Tapio's decoupling indicator of CO2 emissions from economic development in 20 selected African countries during 1984-2014. Results reveal that CO2 emissions increased by 2.11% (453.73 million ton) over the research period. Gravity centre for African CO2 emissions had shifted towards the northeast direction. Population and economic growth were primary driving forces of CO2 emissions. Industrial structure and emission efficiency effects partially offset the growth of CO2 emissions. The economic growth effect was an offset factor in central African countries and Zimbabwe due to political instability and economic mismanagement. Industrial structure and emission efficiency were insufficient to decouple economic development from CO2 emissions and relieve the pressure of population explosion on CO2 emissions in Africa. Thus, future efforts in reducing CO2 emissions should focus on scale-up energy-efficient technologies, renewable energy update, emission pricing and long-term green development towards sustainable development goals by 2030.


Assuntos
Dióxido de Carbono , Desenvolvimento Econômico , África , Dióxido de Carbono/análise , China , Indústrias , Desenvolvimento Sustentável
13.
Zhonghua Nan Ke Xue ; 27(8): 748-752, 2021 Aug.
Artigo em Zh | MEDLINE | ID: mdl-34914250

RESUMO

Premature ejaculation is one of the common male sexual dysfunction diseases. Lifelong premature ejaculation (LPE), characterized by an early onset and a long course of disease, has a variety of negative effects on men. The pathogenesis of LPE has not been clarified, but it is believed to be related to the regulation of 5-HT and the 5-HT1a and 5-HT2c receptors from the perspective of the theory of 5-HT system neurotransmitter disorder. Current studies indicate that the 5-HT transporter gene-linked polymorphic region (5-HTTLPR), 5-HT1a receptor gene polymorphism and 5-HT2c receptor gene polymorphism may be associated with the development of and drug effect on LPE. This article reviews the current studies on the development of LPE, effects of medication and 5-HT system gene polymorphism, and discusses the correlation of 5-HT system gene polymorphism with the development of LPE and effects of medication.


Assuntos
Ejaculação Precoce , Receptor 5-HT1A de Serotonina/genética , Receptor 5-HT2C de Serotonina/genética , Proteínas da Membrana Plasmática de Transporte de Serotonina/genética , Serotonina , Humanos , Masculino , Polimorfismo Genético , Ejaculação Precoce/genética , Serotonina/genética
14.
Plant J ; 98(2): 260-276, 2019 04.
Artigo em Inglês | MEDLINE | ID: mdl-30570805

RESUMO

Alternative polyadenylation (APA) is a widespread post-transcriptional mechanism that regulates gene expression through mRNA metabolism, playing a pivotal role in modulating phenotypic traits in rice (Oryza sativa L.). However, little is known about the APA-mediated regulation underlying the distinct characteristics between two major rice subspecies, indica and japonica. Using a poly(A)-tag sequencing approach, polyadenylation (poly(A)) site profiles were investigated and compared pairwise from germination to the mature stage between indica and japonica, and extensive differentiation in APA profiles was detected genome-wide. Genes with subspecies-specific poly(A) sites were found to contribute to subspecies characteristics, particularly in disease resistance of indica and cold-stress tolerance of japonica. In most tissues, differential usage of APA sites exhibited an apparent impact on the gene expression profiles between subspecies, and genes with those APA sites were significantly enriched in quantitative trait loci (QTL) related to yield traits, such as spikelet number and 1000-seed weight. In leaves of the booting stage, APA site-switching genes displayed global shortening of 3' untranslated regions with increased expression in indica compared with japonica, and they were overrepresented in the porphyrin and chlorophyll metabolism pathways. This phenomenon may lead to a higher chlorophyll content and photosynthesis in indica than in japonica, being associated with their differential growth rates and yield potentials. We further constructed an online resource for querying and visualizing the poly(A) atlas in these two rice subspecies. Our results suggest that APA may be largely involved in developmental differentiations between two rice subspecies, especially in leaf characteristics and the stress response, broadening our knowledge of the post-transcriptional genetic basis underlying the divergence of rice traits.


Assuntos
Genes de Plantas/genética , Oryza/genética , Oryza/metabolismo , Poliadenilação , Aclimatação , Clorofila/metabolismo , Regulação da Expressão Gênica de Plantas , Germinação , Fenótipo , Fotossíntese , Folhas de Planta/genética , Folhas de Planta/metabolismo , Locos de Características Quantitativas , Sementes , Estresse Fisiológico , Transcriptoma
15.
Funct Integr Genomics ; 20(5): 681-693, 2020 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-32566966

RESUMO

Bacterial leaf streak (BLS) is now the fourth-most devastating disease in rice. Dular and H359 are two indica rice varieties with contrasting responses to BLS. Dular displays high resistance, while H359 is susceptible. In this study, RNA-seq was used to examine the early molecular processes deployed during the resistance response of Dular and H359 at different times after inoculation. Differentially expressed gene (DEG) analysis identified 3031 genes in Dular and 7161 in H359 that were modulated in response to infection after 12 and 24 h. There were significantly more DEGs in H359 than in Dular, and there were significantly more downregulated genes than upregulated genes. Gene ontology (GO) and KEGG enrichment analyses revealed a similar set of GO terms and KEGG pathways enriched in both varieties. However, KEGG analysis of upregulated DEGs revealed that some phenylpropane metabolism-related pathways were specially enriched in Dular. Further comparison and analysis showed that the numbers of resistance-related DEGs in the two varieties were significantly reduced at 24 h compared with 12 h after BLS infection and genes critically involved in conferring resistance during the early stage mainly included WRKY transcription factors, receptor kinases and disease, exocyst, MAPK signalling pathway and hormones related genes. Our study suggests that resistance-related genes may play an important role at an early stage of infection and phenylpropane metabolism related genes may partly response for BLS resistance of Dular, thus providing valuable information for future studies on the molecular mechanisms of BLS resistance in rice.


Assuntos
Oryza/genética , Oryza/microbiologia , Doenças das Plantas/genética , Transcriptoma , Xanthomonas , Resistência à Doença , Perfilação da Expressão Gênica , Ontologia Genética , Doenças das Plantas/microbiologia , Reação em Cadeia da Polimerase em Tempo Real
16.
BMC Plant Biol ; 20(1): 561, 2020 Dec 11.
Artigo em Inglês | MEDLINE | ID: mdl-33308141

RESUMO

BACKGROUND: Rice is a typical monocotyledonous plant and an important cereal crop. The structural units of rice flowers are spikelets and florets, and floral organ development and spike germination affect rice reproduction and yield. RESULTS: In this study, we identified a novel long sterile lemma (lsl2) mutant from an EMS population. First, we mapped the lsl2 gene between the markers Indel7-22 and Indel7-27, which encompasses a 25-kb region. The rice genome annotation indicated the presence of four candidate genes in this region. Through gene prediction and cDNA sequencing, we confirmed that the target gene in the lsl2 mutant is allelic to LONG STERILE LEMMA1 (G1)/ELONGATED EMPTY GLUME (ELE), hereafter referred to as lsl2. Further analysis of the lsl2 and LSL2 proteins showed a one-amino-acid change, namely, the mutation of serine (Ser) 79 to proline (Pro) in lsl2 compared with LSL2, and this mutation might change the function of the protein. Knockout experiments showed that the lsl2 gene is responsible for the long sterile lemma phenotype. The lsl2 gene might reduce the damage induced by spike germination by decreasing the seed germination rate, but other agronomic traits of rice were not changed in the lsl2 mutant. Taken together, our results demonstrate that the lsl2 gene will have specific application prospects in future rice breeding. CONCLUSIONS: The lsl2 gene is responsible for the long sterile lemma phenotype and might reduce the damage induced by spike germination by decreasing the seed germination rate.


Assuntos
Flores/crescimento & desenvolvimento , Genes de Plantas , Genes Recessivos , Germinação/genética , Oryza/genética , Clonagem Molecular , Flores/genética , Oryza/metabolismo
17.
J Exp Bot ; 71(1): 90-104, 2020 01 01.
Artigo em Inglês | MEDLINE | ID: mdl-31587070

RESUMO

An increased concentration of cytosolic Ca2+ is an early response of plant cells to heat shock. Arabidopsis cyclic nucleotide-gated ion channel 6 (CNGC6) mediates heat-induced Ca2+ influx and is activated by cAMP. However, it remains unclear how the Ca2+ conductivity of CNGC6 is negatively regulated under the elevated cytosolic Ca2+ concentration. In this study, Arabidopsis calmodulin isoforms CaM1/4, CaM2/3/5, CaM6, and CaM7 were found to bind to CNGC6 to varying degrees, and this binding was dependent on the presence of Ca2+ and IQ6, an atypical isoleucine-glutamine motif in CNGC6. Knockout of CaM2, CaM3, CaM5, and CaM7 genes led to a marked increase in plasma membrane inward Ca2+ current under heat shock conditions; however, knockout of CaM1, CaM4, and CaM6 genes had no significant effect on plasma membrane Ca2+ current. Moreover, the deletion of IQ6 from CNGC6 led to a marked increase in plasma membrane Ca2+ current under heat shock conditions. Taken together, the data suggest that CNGC6-mediated Ca2+ influx is likely to be negatively regulated by CaM2/3/5 and CaM7 isoforms under heat shock conditions, and that IQ6 plays an important role in CaM binding and the feedback regulation of the channel.


Assuntos
Proteínas de Arabidopsis/genética , Arabidopsis/fisiologia , Calmodulina/metabolismo , Canais de Cátion Regulados por Nucleotídeos Cíclicos/genética , Regulação da Expressão Gênica de Plantas/genética , Resposta ao Choque Térmico/genética , Arabidopsis/genética , Proteínas de Arabidopsis/metabolismo , Canais de Cátion Regulados por Nucleotídeos Cíclicos/metabolismo , Isoformas de Proteínas/metabolismo
18.
Sensors (Basel) ; 20(19)2020 Sep 27.
Artigo em Inglês | MEDLINE | ID: mdl-32992657

RESUMO

Singular value decomposition (SVD) methods have aroused wide concern to extract the periodic impulses for bearing fault diagnosis. The state-of-the-art SVD methods mainly focus on the low rank property of the Hankel matrix for the fault feature, which cannot achieve satisfied performance when the background noise is strong. Different to the existing low rank-based approaches, we proposed a simultaneously low rank and group sparse decomposition (SLRGSD) method for bearing fault diagnosis. The major contribution is that the simultaneously low rank and group sparse (SLRGS) property of the Hankel matrix for fault feature is first revealed to improve performance of the proposed method. Firstly, we exploit the SLRGS property of the Hankel matrix for the fault feature. On this basis, a regularization model is formulated to construct the new diagnostic framework. Furthermore, the incremental proximal algorithm is adopted to achieve a stationary solution. Finally, the effectiveness of the SLRGSD method for enhancing the fault feature are profoundly validated by the numerical analysis, the artificial bearing fault experiment and the wind turbine bearing fault experiment. Simulation and experimental results indicate that the SLRGSD method can obtain superior results of extracting the incipient fault feature in both performance and visual quality as compared with the state-of-the-art methods.

19.
Sensors (Basel) ; 21(1)2020 Dec 28.
Artigo em Inglês | MEDLINE | ID: mdl-33379213

RESUMO

In the fingertip blood automatic sampling process, when the blood sampling point in the fingertip venous area, it will greatly increase the amount of bleeding without being squeezed. In order to accurately locate the blood sampling point in the venous area, we propose a new finger vein image segmentation approach basing on Gabor transform and Gaussian mixed model (GMM). Firstly, Gabor filter parameter can be set adaptively according to the differential excitation of image and we use the local binary pattern (LBP) to fuse the same-scale and multi-orientation Gabor features of the image. Then, finger vein image segmentation is achieved by Gabor-GMM system and optimized by the max flow min cut method which is based on the relative entropy of the foreground and the background. Finally, the blood sampling point can be localized with corner detection. The experimental results show that the proposed approach has significant performance in segmenting finger vein images which the average accuracy of segmentation images reach 91.6%.


Assuntos
Algoritmos , Testes Hematológicos , Processamento de Imagem Assistida por Computador , Entropia , Distribuição Normal , Veias/diagnóstico por imagem
20.
Int J Mol Sci ; 21(19)2020 Sep 25.
Artigo em Inglês | MEDLINE | ID: mdl-32992695

RESUMO

The exocyst, an evolutionarily conserved octameric protein complex, mediates tethering of vesicles to the plasma membrane in the early stage of exocytosis. Arabidopsis Exo70, a subunit of the exocyst complex, has been found to be involved in plant immunity. Here, we characterize the function of OsExo70B1 in rice. OsExo70B1 mainly expresses in leaf and shoot and its expression is induced by pathogen-associated molecular patterns (PAMPs) and rice blast fungus Magnaporthe oryzae (M. oryzae). Knocking out OsExo70B1 results in significantly decreased resistance and defense responses to M. oryzae compared to the wild type, including more disease lesions and enhanced fungal growth, downregulated expression of pathogenesis-related (PR) genes, and decreased reactive oxygen species accumulation. In contrast, the exo70B1 mutant does not show any defects in growth and development. Furthermore, OsExo70B1 can interact with the receptor-like kinase OsCERK1, an essential component for chitin reception in rice. Taken together, our data demonstrate that OsExo70B1 functions as an important regulator in rice immunity.


Assuntos
Ascomicetos/patogenicidade , Resistência à Doença/genética , Oryza/genética , Doenças das Plantas/genética , Proteínas de Plantas/genética , Proteínas de Transporte Vesicular/genética , Regulação da Expressão Gênica de Plantas , Interações Hospedeiro-Patógeno , Oryza/microbiologia , Doenças das Plantas/microbiologia , Folhas de Planta/microbiologia , Espécies Reativas de Oxigênio/metabolismo
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