Detalhe da pesquisa
1.
Deep mutational learning predicts ACE2 binding and antibody escape to combinatorial mutations in the SARS-CoV-2 receptor-binding domain.
Cell
; 185(21): 4008-4022.e14, 2022 10 13.
Artigo
em Inglês
| MEDLINE | ID: mdl-36150393
2.
Phenotypic determinism and stochasticity in antibody repertoires of clonally expanded plasma cells.
Proc Natl Acad Sci U S A
; 119(18): e2113766119, 2022 05 03.
Artigo
em Inglês
| MEDLINE | ID: mdl-35486691
3.
ePlatypus: an ecosystem for computational analysis of immunogenomics data.
Bioinformatics
; 39(9)2023 09 02.
Artigo
em Inglês
| MEDLINE | ID: mdl-37682115
4.
Profiling the specificity of clonally expanded plasma cells during chronic viral infection by single-cell analysis.
Eur J Immunol
; 52(2): 297-311, 2022 02.
Artigo
em Inglês
| MEDLINE | ID: mdl-34727578
5.
Persistent virus-specific and clonally expanded antibody-secreting cells respond to induced self-antigen in the CNS.
Acta Neuropathol
; 145(3): 335-355, 2023 03.
Artigo
em Inglês
| MEDLINE | ID: mdl-36695896
6.
Single-cell immune repertoire sequencing of B and T cells in murine models of infection and autoimmunity.
Genes Immun
; 23(6): 183-195, 2022 09.
Artigo
em Inglês
| MEDLINE | ID: mdl-36028771
7.
DeepSARS: simultaneous diagnostic detection and genomic surveillance of SARS-CoV-2.
BMC Genomics
; 23(1): 289, 2022 Apr 11.
Artigo
em Inglês
| MEDLINE | ID: mdl-35410128
8.
Single-cell immune repertoire and transcriptome sequencing reveals that clonally expanded and transcriptionally distinct lymphocytes populate the aged central nervous system in mice.
Proc Biol Sci
; 288(1945): 20202793, 2021 02 24.
Artigo
em Inglês
| MEDLINE | ID: mdl-33622131
9.
immuneSIM: tunable multi-feature simulation of B- and T-cell receptor repertoires for immunoinformatics benchmarking.
Bioinformatics
; 36(11): 3594-3596, 2020 06 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-32154832
10.
Inter- and intraspecies comparison of phylogenetic fingerprints and sequence diversity of immunoglobulin variable genes.
Immunogenetics
; 72(5): 279-294, 2020 07.
Artigo
em Inglês
| MEDLINE | ID: mdl-32367185
11.
Comparison of methods for phylogenetic B-cell lineage inference using time-resolved antibody repertoire simulations (AbSim).
Bioinformatics
; 33(24): 3938-3946, 2017 Dec 15.
Artigo
em Inglês
| MEDLINE | ID: mdl-28968873
12.
Asymmetric cell division safeguards memory CD8 T cell development.
Cell Rep
; 42(5): 112468, 2023 05 30.
Artigo
em Inglês
| MEDLINE | ID: mdl-37178119
13.
Generation of a single-cell B cell atlas of antibody repertoires and transcriptomes to identify signatures associated with antigen specificity.
iScience
; 26(3): 106055, 2023 Mar 17.
Artigo
em Inglês
| MEDLINE | ID: mdl-36852274
14.
Discovery and validation of human genomic safe harbor sites for gene and cell therapies.
Cell Rep Methods
; 2(1): 100154, 2022 01 24.
Artigo
em Inglês
| MEDLINE | ID: mdl-35474867
15.
Clonally Expanded Virus-Specific CD8 T Cells Acquire Diverse Transcriptional Phenotypes During Acute, Chronic, and Latent Infections.
Front Immunol
; 13: 782441, 2022.
Artigo
em Inglês
| MEDLINE | ID: mdl-35185882
16.
Tissue-resident CD8+ T cells drive compartmentalized and chronic autoimmune damage against CNS neurons.
Sci Transl Med
; 14(640): eabl6157, 2022 04 13.
Artigo
em Inglês
| MEDLINE | ID: mdl-35417189
17.
Echidna: integrated simulations of single-cell immune receptor repertoires and transcriptomes.
Bioinform Adv
; 2(1): vbac062, 2022.
Artigo
em Inglês
| MEDLINE | ID: mdl-36699357
18.
SARS-CoV-2 reactive and neutralizing antibodies discovered by single-cell sequencing of plasma cells and mammalian display.
Cell Rep
; 38(3): 110242, 2022 01 18.
Artigo
em Inglês
| MEDLINE | ID: mdl-34998467
19.
Tissue-resident memory CD8+ T cells cooperate with CD4+ T cells to drive compartmentalized immunopathology in the CNS.
Sci Transl Med
; 14(640): eabl6058, 2022 04 13.
Artigo
em Inglês
| MEDLINE | ID: mdl-35417190
20.
Applications of Machine and Deep Learning in Adaptive Immunity.
Annu Rev Chem Biomol Eng
; 12: 39-62, 2021 06 07.
Artigo
em Inglês
| MEDLINE | ID: mdl-33852352