A deep eutectic solvent magnetic molecularly imprinted polymer for extraction of laminarin from seaweeds.

Magnetic molecular imprinted polymers (MIPs) based on 4-vinylbenzyltrimethylammonium chloride (VBTAC) and 4-vinylbenzoic acid (VBA) deep eutectic solvent as dual functional monomers was successfully synthesized for the specific recognition of laminarin. The MIPs were characterized by transmission electron microscopy, scanning electron microscopy, Fourier transform infrared spectroscopy, thermal gravimetric analysis, and vibrating sample magnetometer analysis. The results showed that the MIPs were spheres of a uniform size, with the surface rich in cavities and excellent superparamagnetism properties. The adsorption experiments showed that MIPs conform to pseudo-second-order kinetics and Langmuir isotherm adsorption. The maximum adsorption capacity under optimal conditions was 322.58 µg·mg-1 and the imprinting factor was 2.13. Under the optimized conditions, the limit of detection (LOD) of the developed material was 6.6 µM. Linearity of the material was obtained within the range 20-800 µM with a coefficient of determination (r2) being better 0.999. Relative standard deviations (RSDs) were less than 3.96%, and satisfactory recoveries were between 94.55 and 97.39%. The actual sample analysis manifested that MIPs could effectively separate laminarin from Laminarin japonica Aiesch.

Abrupt climate fluctuations in Tibet as imprints of multiple meltwater events during the early to mid-Holocene.

Understanding the impact of meltwater discharge during the final stage of the Laurentide Ice Sheet (LIS) has important implications for predicting sea level rise and climate change. Here we present a high-resolution ice-core isotopic record from the central Tibetan Plateau (TP), where the climate is sensitive to the meltwater forcing, and explore possible signals of the climate response to potential LIS meltwater discharges in the early to mid-Holocene. The record shows four abrupt large fluctuations during the 7-9 ka BP (kiloannum before present), reflecting large shifts of the mid-latitude westerlies and the Indian summer monsoon (ISM) over this period, and they corresponded to possible LIS freshwater events documented in other paleoclimate records. Our study suggests that multiple rapid meltwater discharge events might have occurred during the final stage of LIS. The finding implies the possibility of rapid sea level rise and unstable climate in the transition zone between the mid-latitude westerlies and the ISM due to fast polar ice retreat under the anthropogenic global warming.

Effects of endophytic fungi on the secondary metabolites of Hordeum bogdanii under alkaline stress.

It is currently unclear whether the mechanism of endophytic fungi improving the alkali tolerance of Hordeum bogdanii affects secondary metabolites. Unveiling this knowledge is crucial for understanding the tolerance mechanism of H. bogdanii to alkaline stress. The aim of this study was to investigate how endophytic fungi affect secondary metabolites of H. bogdanii under alkaline stress at different concentrations. Endophyte-infected (E +) and endophyte-free (E-) individuals of H. bogdanii were used as materials in this study. The method of indoor vermiculite aseptic planting was adopted. After mixed alkali stress treatment, the roots, stems, and leaves of the plants were collected to measure the indicators related to secondary metabolites. The results showed that endophytic fungi improved the alkali resistance of H. bogdanii by improving the related indicators of secondary metabolites. endophytic fungi significantly increased the contents of phosphorus, polyphenols, and alkaloids, and the activities of polyphenol oxidase and acid phosphatase, and significantly reduced flavonoid content. The content of polyphenols and alkaloids in stems, polyphenol oxidase activity in stems and leaves, and acid phosphatase activity in leaves were significantly affected. The findings of this study may aid in amplifying the alkali resistance mechanism of endophytic fungi to H. bogdanii as well as provide insights into improving the alkali resistance of other plants.

Ice-core based assessment of nitrogen deposition in the central Tibetan Plateau over the last millennium.

Atmospheric nitrogen deposition is a unique source of bioavailable nitrogen for ecosystems in remote regions, and has vital impacts on ecological processes. Understanding variations of atmospheric nitrogen deposition in these regions remains challenging due to a lack of observations. Ice cores contain records of nitrogen species of nitrate (NO3-) and ammonium (NH4+), hence provide valuable long-term data to study past variations of atmospheric nitrogen deposition. In this study, we present an annually resolved record of NH4+ and NO3- over the past millennium, derived from the Zangser Kangri (ZK) ice core in the central Tibetan Plateau. The concentration peaks of NH4+ and NO3- coincide with those of Ca2+ (a dust tracer), indicating that variation of nitrogen species in the ZK ice core is largely driven by dust activities. An EOF analysis for all chemical species (Cl-, SO42-, NO3-, Na+, NH4+, K+, Mg2+, Ca2+) reveals significant but separate loadings of NH4+ and NO3- on EOF 2, suggesting an additional source of nitrogen, likely from biogenic emissions of terrestrial ecosystems. Over the past millennium, the EOF 2 series has relatively high values around 1300 CE and 1600 CE, and has increased significantly since the Industrial Revolution. These variations are likely driven by temperature-dependent biogenic emissions on the Tibetan Plateau. Analyses of seasonal air mass backward trajectories and wind fields find that the chemical concentrations in the ZK ice core are mostly influenced by the westerly, but South Asia summer monsoon plays an important role in the transport of nitrogen species generated from biogenic emissions. This is further confirmed by the significant correlation between EOF 2 series and the South Asian summer monsoon index. This study provides new insight into the preindustrial sources, natural variabilities and major drivers of nitrogen deposition on the Tibetan Plateau.

The first detection of organophosphate esters (OPEs) of a high altitude fresh snowfall in the northeastern Tibetan Plateau.

Due to the gradual phase-out of brominated flame retardants, the consumption of organophosphate esters (OPEs) as suitable alternatives has increased in recent years. These compounds could be trapped and accumulate in the widely developed glaciers such as Laohugou Glacier No. 12 in the Tibetan Plateau (TP), as snow is an effective scavenger of organic pollutants in the atmosphere. However, large gaps in knowledge still exist regarding the occurrence, distribution, and source analysis of OPEs in TP glaciers. In this study, eight surface snow samples collected at different altitudes on Laohugou Glacier No. 12 on the northeastern edge of the TP in order to investigate sources and distribution of OPEs. The results showed that the concentrations of ∑7OPEs varied from 54.53 ng/L to 169.15 ng/L, with a mean of 99.84 ng/L. ∑Chlorinated-OPEs (Cl-OPEs) were dominant in these samples, accounting for 83% of the total OPE concentrations. ∑OPEs concentration increases with altitude on Laohugou Glacier No. 12, implying an altitudinal magnification effect on OPEs deposition. Principal component analysis suggests that OPEs primarily originated from traffic emissions and their variations were largely driven by dust transport. Analyses of backward trajectories of air masses and the wind field indicate that these OPEs might have come from urban emissions northwest of Laohugou Glacier No. 12. This study provides the first valuable insight into the environmental behavior of OPEs in Tibetan glaciers.

Assessment of heavy metal contamination in the atmospheric deposition during 1950-2016 A.D. from a snow pit at Dome A, East Antarctica.

Antarctic trace element records could provide important insights into the impact of human activities on the environment over the past few centuries. In this study, we investigated the atmospheric concentrations of 14 representative heavy metals (Al, As, Cd, Co, Cu, Fe, K, Mg, Mn, Pb, Sb, Sr, Tl and V) from 174 samples collected in a 4-m snow pit at Dome Argus (Dome A) on the East Antarctic Plateau, covering the period from 1950 to 2016 A.D. We found great variability in the annual concentration of all metals. The crustal enrichment factors suggest that the concentrations of some heavy metals (Cd, Sb, Cu, As and Pb) were likely influenced by anthropogenic activities in recent decades. An analysis of source regions suggests that heavy metal pollution at Dome A was largely caused by human activities in Australia and South America (e.g. mining production, leaded gasoline). Based on the relationship between the trace elements fluxes and sea ice concentration (SIC), sea surface temperature (SST) and annual mean air temperature at 2 m above the ground (T2m), our analysis shows that deposition and transport of atmospheric aerosol at Dome A were influenced by circum-Antarctic atmospheric circulations.

NtRBP45, a nuclear RNA-binding protein of Nicotiana tabacum, facilitates post-transcriptional gene silencing.

The tobacco RBP45 is a nuclear RNA binding protein (RBP). In this study, we identified that the gene expression of NtRBP45 was significantly up-regulated upon the Tobacco mosaic virus infection and the central region of the protein accounted for its nuclear localization. In particular, using a green fluorescent protein-based transient suppression assay, we uncovered that the transiently overexpressed NtRBP45 was able to enhance local post-transcriptional gene silencing (PTGS), facilitate siRNA accumulation, and compromise the RNA silencing suppression mediated by Tomato aspermy virus 2b protein. Deletion mutagenesis showed that both the N- and C-terminal regions of NtRBP45 were necessary for enhancing PTGS. The data overall indicated a novel RNA silencing factor that might participate in antiviral defense.

An increase of ammonia emissions from terrestrial ecosystems on the Tibetan Plateau since 1980 deduced from ice core record.

Ammonia (NH3) emissions could have significant impacts on both ecosystems and human health. Ice cores from the Tibetan Plateau contain information about past ammonium (NH4+) deposition, which could yield important insights into historical NH3 emissions in the surrounding source regions as well as long-distance NH4+ aerosol transport via atmospheric circulation. In this paper, we present a high-resolution atmospheric NH4+ deposition record for the period, 1951-2008, reconstructed from the Zangser Kangri (ZK) ice core in the northern Tibetan Plateau. An empirical orthogonal function (EOF) analysis of major soluble ions (NH4+, NO3-, SO42-, Cl-, Na+, K+, Mg2+ and Ca2+) reveals that EOF 1 has significant loadings of all ions, therefore representing common transport pathways, while EOF 2 is only significantly loaded by NH4+ (0.86) and NO3- (0.35), suggesting a unique signal possibly representing emissions from the surrounding terrestrial ecosystems on the Tibetan Plateau. Backward trajectory analysis indicates that the air masses over the ZK ice core drilling site primarily come from the northwestern Indian Peninsula. NH3 emissions from agricultural activities in this area likely contribute to the NH4+ deposition of the ZK ice core via the Indian monsoon. Correlations between EOF 2 time series and temperature, normalized difference vegetation index (NDVI) suggest that increasing temperature and vegetation after 1980 likely promoted NH3 emissions from terrestrial ecosystems. Our results provide a reliable and valuable assessment of NH4+ deposition from human activities and terrestrial ecosystems in the ZK ice core, and help in understanding air pollution over the past few decades in the northern Tibetan Plateau.

Genome-wide identification of the Sec-dependent secretory protease genes in Erwinia amylovora and analysis of their expression during infection of immature pear fruit.

The general secretory (Sec) pathway represents a common mechanism by which bacteria secrete proteins, including virulence factors, into the extracytoplasmic milieu. However, there is little information about this system, as well as its associated secretory proteins, in relation to the fire blight pathogen Erwinia amylovora. In this study, data mining revealed that E. amylovora harbors all of the essential components of the Sec system. Based on this information, we identified putative Sec-dependent secretory proteases in E. amylovora on a genome-wide scale. Using the programs SignalP, LipoP, and Phobius, a total of 15 putative proteases were predicted to contain the N-terminal signal peptides (SPs) that might link them to the Sec-dependent pathway. The activities of the predicted SPs were further validated using an Escherichia coli-based alkaline phosphatase (PhoA) gene fusion system that confirmed their extracytoplasmic property. Transcriptional analyses showed that the expression of 11 of the 15 extracytoplasmic protease genes increased significantly when E. amylovora was used to inoculate immature pears, suggesting their potential roles in plant infection. The results of this study support the suggestion that E. amylovora might employ the Sec system to secrete a suite of proteases to enable successful infection of plants, and shed new light on the interaction of E. amylovora with host plants.

The perchlorate record during 1956-2004 from Tienshan ice core, East Asia.

Perchlorate concentration in a shallow ice core at Tienshan, East Asia ranged between 0.55 and 52.1 ng L-1, with significant temporal variations during 1956-2004. Since the 1980s, a clear increasing trend of perchlorate was observed in the Miaoergou ice core, possibly the result of elevated stratospheric chlorine levels caused by emissions of anthropogenic volatile chlorine compounds. Although differences in trends and amounts were observed, the 1956-2004 perchlorate data from this study compares well with the perchlorate data from the High Arctic ice cores. The spatial and temporal differences of the perchlorate in Miaoergou ice core may be due to differences in anthropogenic sources. Such as, the nitrate ore field in Turpan-Hami Basin in eastern Xinjiang, China, may be the primary anthropogenic source. From the organic chlorine species emission data, HCFC-141b, HCFC-142b and HCFC-124 were identified as the primary anthropogenic sources responsible for the two perchlorate spikes observed for 1980-1996 and 1997-2001. The Miaoergou ice core covering the 1956-2004 period provides further evidence for the perchlorate deposition variations between mid-latitudes and the High Arctic regions.

Uranium record from a 3 m snow pit at Dome Argus, East Antarctica.

Understanding the distribution and transport of Uranium is important because it can lead to both chemical and radiological toxicity. This study presents the Uranium concentrations time series from 1964 to 2009 obtained from a 3 m deep snow pit at Dome Argus, East Antarctic Plateau. The data shows that Uranium concentrations vary from 0.0067 pg g-1 to 0.12 pg g-1, with a mean concentration of 0.044 pg g-1. Its mean concentration is 2-3 folds lower than at West Antarctica study sites, such as the Antarctic Peninsula (mean 0.12 pg g-1), IC-6 (Ice Core-6) (mean 0.11 pg g-1) and a suite of ice cores from the US ITASE traverse. Before the mid-1980s, the varieties of Uranium concentrations are relatively stable, with a very low mean concentration of 0.016 pg g-1and its main source is sea salt deposition, while a small number of anthropogenic sources are likely to be caused by Uranium mining operations in South Africa. A remarkable increase of Uranium concentrations has occurred since the mid-1980s (by a factor of ~ 9) compared with the amount before the mid-1980s. This increase coincides with the Uranium records at IC-6 and Antarctic Peninsula (DP-07-01) during the same period, and are mostly attributed to Uranium mining operations in Australia as a potential primary anthropogenic Uranium source. Our observations suggest that Uranium pollution in the atmosphere might have already become a global phenomenon.

Corrigendum: Possible recent warming hiatus on the northwestern Tibetan Plateau derived from ice core records.

This corrects the article DOI: 10.1038/srep32813.

Possible recent warming hiatus on the northwestern Tibetan Plateau derived from ice core records.

Many studies have reported enhanced warming trend on the Tibetan Plateau (TP), even during the warming hiatus period. However, most of these studies are based on instrumental data largely collected from the eastern TP, whereas the temperature trend over the extensive northwestern TP remains uncertain due to few meteorological stations. Here we combined the stable isotopic δ(18)O record of an ice core recovered in 2012 from the Chongce glacier with the δ(18)O records of two other ice cores (i.e., Muztagata and Zangser Kangri) in the same region to establish a regional temperature series for the northwestern TP. The reconstruction shows a significant warming trend with a rate of 0.74 ± 0.12 °C/decade for the period 1970-2000, but a decreasing trend from 2001 to 2012. This is consistent with the reduction of warming rates during the recent decade observed at the only two meteorological stations on the northwestern TP, even though most stations on the eastern TP have shown persistent warming during the same period. Our results suggest a possible recent warming hiatus on the northwestern TP. This could have contributed to the relatively stable status of glaciers in this region.

Transcriptomic analysis of the primary roots of Alhagi sparsifolia in response to water stress.

BACKGROUND: Alhagi sparsifolia is a typical desert phreatophyte and has evolved to withstand extreme dry, cold and hot weather. While A. sparsifolia represents an ideal model to study the molecular mechanism of plant adaption to abiotic stress, no research has been done in this aspect to date. Here we took advantage of Illumina platform to survey transcriptome in primary roots of A. sparsifolia under water stress conditions in aim to facilitate the exploration of its genetic basis for drought tolerance. METHODOLOGY AND PRINCIPAL FINDINGS: We sequenced four primary roots samples individually collected at 0, 6, 24 and 30h from the A. sparsifolia seedlings in the course of 24h of water stress following 6h of rehydration. The resulting 38,763,230, 67,511,150, 49,259,804 and 54,744,906 clean reads were pooled and assembled into 33,255 unigenes with an average length of 1,057 bp. All-unigenes were subjected to functional annotation by searching against the public databases. Based on the established transcriptome database, we further evaluated the gene expression profiles in the four different primary roots samples, and identified numbers of differently expressed genes (DEGs) reflecting the early response to water stress (6h vs. 0h), the late response to water stress (24h vs. 0h) and the response to post water stress rehydration (30h vs. 24h). Moreover, the DEGs specifically regulated at 6, 24 and 30h were captured in order to depict the dynamic changes of gene expression during water stress and subsequent rehydration. Functional categorization of the DEGs indicated the activation of oxidoreductase system, and particularly emphasized the significance of the 'Glutathione metabolism pathway' in response to water stress. CONCLUSIONS: This is the first description of the genetic makeup of A. sparsifolia, thus providing a substantial contribution to the sequence resources for this species. The identified DEGs offer a deep insight into the molecular mechanism of A. sparsifolia in response to water stress, and merit further investigation.