Indication of Electromagnetic Field Exposure via RBF-SVM Using Time-Series Features of Zebrafish Locomotion.

This paper introduces a novel model based on support vector machine with radial basis function kernel (RBF-SVM) using time-series features of zebrafish (Danio rerio) locomotion exposed to different electromagnetic fields (EMFs) to indicate the corresponding EMF exposure. A group of 14 adult zebrafish was randomly divided into two groups, 7 in each group; the fish of each group have the novel tank test under a sham or real magnetic exposure of 6.78 MHz and about 1 A/m. Their locomotion in the tests was videotaped to convert into the x, y coordinate time-series of the trajectories for reforming time-series matrices according to different time-series lengths. The time-series features of zebrafish locomotion were calculated by the comparative time-series analyzing framework highly comparative time-series analysis (HCTSA), and a limited number of the time-series features that were most relevant to the EMF exposure conditions were selected using the minimum redundancy maximum relevance (mRMR) algorithm for RBF-SVM classification training. Before this, ambient environmental parameters (AEPs) had little effect on the locomotion performance of zebrafish processed by the empirical method, which had been quantitatively verified by regression using another group of 14 adult zebrafish. The results have demonstrated that the purposed model is capable of accurately indicating different EMF exposures. All classification accuracies can be 100%, and the classification precision of several classifiers based on specific parameters and feature sets with specific dimensions can reach higher than 95%. The speculative reason for this result is that the specified EMF has affected the zebrafish neural aspect, which is then reflected in their behaviors. The outcomes of this study have provided a new indication model for EMF exposures and provided a reference for the investigation of the impact of EMF exposure.

Recognizing Physical Activity of Older People from Wearable Sensors and Inconsistent Data.

The physiological monitoring of older people using wearable sensors has shown great potential in improving their quality of life and preventing undesired events related to their health status. Nevertheless, creating robust predictive models from data collected unobtrusively in home environments can be challenging, especially for vulnerable ageing population. Under that premise, we propose an activity recognition scheme for older people exploiting feature extraction and machine learning, along with heuristic computational solutions to address the challenges due to inconsistent measurements in non-standardized environments. In addition, we compare the customized pipeline with deep learning architectures, such as convolutional neural networks, applied to raw sensor data without any pre- or post-processing adjustments. The results demonstrate that the generalizable deep architectures can compensate for inconsistencies during data acquisition providing a valuable alternative.

Classification of Alzheimer's disease based on hippocampal multivariate morphometry statistics.

BACKGROUND: Alzheimer's disease (AD) is a neurodegenerative disease characterized by progressive cognitive decline, and mild cognitive impairment (MCI) is associated with a high risk of developing AD. Hippocampal morphometry analysis is believed to be the most robust magnetic resonance imaging (MRI) markers for AD and MCI. Multivariate morphometry statistics (MMS), a quantitative method of surface deformations analysis, is confirmed to have strong statistical power for evaluating hippocampus. AIMS: We aimed to test whether surface deformation features in hippocampus can be employed for early classification of AD, MCI, and healthy controls (HC). METHODS: We first explored the differences in hippocampus surface deformation among these three groups by using MMS analysis. Additionally, the hippocampal MMS features of selective patches and support vector machine (SVM) were used for the binary classification and triple classification. RESULTS: By the results, we identified significant hippocampal deformation among the three groups, especially in hippocampal CA1. In addition, the binary classification of AD/HC, MCI/HC, AD/MCI showed good performances, and area under curve (AUC) of triple-classification model achieved 0.85. Finally, positive correlations were found between the hippocampus MMS features and cognitive performances. CONCLUSIONS: The study revealed significant hippocampal deformation among AD, MCI, and HC. Additionally, we confirmed that hippocampal MMS can be used as a sensitive imaging biomarker for the early diagnosis of AD at the individual level.

Cloud-based email phishing attack using machine and deep learning algorithm.

Cloud computing refers to the on-demand availability of personal computer system assets, specifically data storage and processing power, without the client's input. Emails are commonly used to send and receive data for individuals or groups. Financial data, credit reports, and other sensitive data are often sent via the Internet. Phishing is a fraudster's technique used to get sensitive data from users by seeming to come from trusted sources. The sender can persuade you to give secret data by misdirecting in a phished email. The main problem is email phishing attacks while sending and receiving the email. The attacker sends spam data using email and receives your data when you open and read the email. In recent years, it has been a big problem for everyone. This paper uses different legitimate and phishing data sizes, detects new emails, and uses different features and algorithms for classification. A modified dataset is created after measuring the existing approaches. We created a feature extracted comma-separated values (CSV) file and label file, applied the support vector machine (SVM), Naive Bayes (NB), and long short-term memory (LSTM) algorithm. This experimentation considers the recognition of a phished email as a classification issue. According to the comparison and implementation, SVM, NB and LSTM performance is better and more accurate to detect email phishing attacks. The classification of email attacks using SVM, NB, and LSTM classifiers achieve the highest accuracy of 99.62%, 97% and 98%, respectively.

SVM classification of facial functions based on facial landmarks and animation Units.

Quantitative assessment and classification of facial paralysis (FP) are essential for treatment selection and progress evaluation of the condition. As part of a comprehensive framework towards this goal, this study aims to classify five normal facial functions: smiling, eye closure, raising the eyebrows, blowing cheeks, and whistling as well as the rest state. 3D facial landmarks and facial animation units (FAUs) were obtained using the Kinect V2, a fast and cost-effective depth camera. These were used to compute the features used in a Support Vector Machine (SVM) classifier. A dataset of 1650 records from 50 normal subjects was compiled for this study. The performances of different SVM kernel models were tested with different feature groups. The best performance (Accuracy = 96.7%, Sensitivity = 90.2%, and Specificity = 98%) was found when using the RBF kernel model applied on just nine differences in FAUs. This research will be developed and extended to include FP classification.

Non-Contact Early Warning of Shaking Palsy.

Parkinsonian gait is a defining feature of shaking palsy (SP) and it has one of the worse impacts on human healthy life than other SP symptoms. The objective of this work is to propose a Parkinsonian gait detection system based on an S-band perception technique to classify abnormal gait and normal walking. Due to the differences in the Gaits of Parkinson's patients compared with healthy persons, the wireless signals reflect and generates different variations at the receiver that could be used for SP diagnosis and classification. To detect a Parkinsonian gait, we first implement data preprocessing of the original data to obtain clear amplitude and phase information. Then, the feature extraction is carried out by principal component analysis (PCA). Finally, a support vector machine (SVM) classification algorithm is applied on collected data to classify the abnormal gait of SP patients compared with a normal gait. We evaluate the proposed system with different people, and the experimental outcomes show that the Parkinsonian gait detection of this training-based system achieves a high accuracy of above 90%. Moreover, the early warning of SP is achieved in a non-contact manner.

The Helitron family classification using SVM based on Fourier transform features applied on an unbalanced dataset.

Helitrons are mobile sequences which belong to the class 2 of eukaryotic transposons. Their specificity resides in their mechanism of transposition: the rolling circle mechanism. They play an important role in remodeling proteomes due to their ability to modify existing genes and introducing new ones. A major difficulty in identifying and classifying Helitron families comes from the complex structure, the unspecified length, and the unbalanced appearance number of each Helitron type. The Helitron's recognition is still not solved in literature. The purpose of this paper is to characterize and classify Helitron types using spectral features and support vector machine (SVM) classification technique. Thus, the helitronic DNA is transformed into a numerical form using the FCGS2 coding technique. Then, a set of spectral features is extracted from the smoothed Fourier transform applied on the FCGS2 signals. Based on the spectral signature and the classification's confusion matrix, we demonstrated that some specific classes which do not show similarities, such as HelitronY2 and NDNAX3, are easily discriminated with important accuracy rates exceeding 90%. However, some Helitron types have great similarities such as the following: Helitron1, HelitronY1, HelitronY1A, and HelitronY4. Our system is also able to predict them with promising values reaching 70%. Graphical abstract The Helitron recognizer based on features extracted from smoothed Fourier transform.

Stimulus dependent neural oscillatory patterns show reliable statistical identification of autism spectrum disorder in a face perceptual decision task.

OBJECTIVE: Electroencephalographic biomarkers have been widely investigated in autism, in the search for diagnostic, prognostic and therapeutic outcome measures. Here we took advantage of the information available in temporal oscillatory patterns evoked by simple perceptual decisions to investigate whether stimulus dependent oscillatory signatures can be used as potential biomarkers in autism spectrum disorder (ASD). METHODS: We studied an extensive set of stimuli (9 categories of faces) and performed data driven classification (Support vector machine, SVM) of ASD vs. Controls with features based on the EEG power responses. We carried out an extensive time-frequency and synchrony analysis of distinct face categories requiring different processing mechanisms in terms of non-holistic vs. holistic processing. RESULTS: We found that the neuronal oscillatory responses of low gamma frequency band, locked to photographic and abstract two-tone (Mooney) face stimulus presentation are decreased in ASD vs. the control group. We also found decreased time-frequency (TF) responses in the beta band in ASD after 350 ms, possibly related to motor preparation. On the other hand, synchrony in the 30-45 Hz band showed a distinct spatial pattern in ASD. These power changes enabled accurate classification of ASD with an SVM approach. SVM accuracy was approximately 85%. ROC curves showed about 94% AUC (area under the curve). Combination of Mooney and Photographic face stimuli evoked features enabled a better separation between groups, reaching an AUC of 98.6%. CONCLUSION: We identified a relative decrease in EEG responses to face stimuli in ASD in the beta (15-30 Hz; >350 ms) and gamma (30-45 Hz; 55-80 Hz; 50-350 ms) frequency ranges. These can be used as input of a machine learning approach to separate between groups with high accuracy. SIGNIFICANCE: Future studies can use EEG time-frequency patterns evoked by particular types of faces as a diagnostic biomarker and potentially as outcome measures in therapeutic trials.

Identification of preterm birth based on RQA analysis of electrohysterograms.

BACKGROUND AND OBJECTIVE: Common methods for data analysis are mainly based on linear concepts, but in recent years nonlinear dynamics methods have been introduced. It is a well-known fact that In typical biological systems lack of stationarity and rather sudden changes of state are the properties distinguishing them from each other. There is an urgent need to better understand the mechanical activity of the myometrium (its contractility) to find a solution for preterm delivery problem, the largest cause of neonatal deaths and morbidity. The electrohysterographic signal (EHG) is a good non-linear, bioelectrical indicator for the detection and identification of term and preterm birth. METHODS: The material of the study consists of EHG signals, obtained from 20 patients between the 24th and the 28th week of pregnancy with threatened preterm labor. The women were divided into two groups: those delivering after more than 7 days - group A (n = 10) and women delivering within 7 days - group B (n = 10). In this paper, an analysis of bioelectrical signals was performed by recurrence quantification analysis (RQA) and principal component analysis (PCA) to distinguish particular patterns for term and preterm birth. To date, these methods have not been used for the evaluation of bioelectrical activity in the uterus. To train novel classifiers for the EHG signals Support Vectors Machine classifications (multiclass SVM) was used. Statistical analysis was performed by means of non-parametric Mann-Whitney test. RESULTS: From among eleven parameters obtained from recurrence quantification analysis, five most appropriate were chosen: Recurrence Rate, Determinism, Laminarity, Entropy and Recurrence Period Density Entropy. Significant increase (p < .001) of Recurrence Rate was found in patients from group B, while increase of parameters, besides Laminarity, was found in patients from group A. The accuracy of classification obtained as a result of the analysis increased to 83,32%. CONCLUSION: We showed that the respectively selected recurrence quantificators obtained for that time series could be used to classify all those signals to the appropriate group. The proposed analysis could help in detecting preterm labor based on the EHG signal dynamics.

Feature selection using ant colony optimization with tandem-run recruitment to diagnose bronchitis from CT scan images.

BACKGROUND AND OBJECTIVES: Computer-aided diagnosis (CAD) plays a vital role in the routine clinical activity for the detection of lung disorders using computed tomography (CT) images. It serves as a source of second opinion that radiologists may consider in order to interpret CT images. In this work, the purpose of CAD is to improve the diagnostic accuracy of pulmonary bronchitis from CT images of the lung. METHODS: Left and right lung fields are segmented using optimal thresholding from the lung CT images. Texture and shape features are extracted from the pathology bearing regions. A hybrid feature selection approach based on ant colony optimization (ACO) combining cosine similarity and support vector machine (SVM) classifier is used to select relevant features. Additionally, tandem run recruitment strategy is included in the selection activity to choose the promising features. The SVM classifier is trained using the selected features and the performance of the trained classifier is evaluated using trivial performance evaluation measures. RESULTS: The training and testing datasets used in building the classifier model are disjoint and contains 200 CT slices affected with bronchitis, 50 normal slices and 300 slices with cancer. Out of 100 features extracted from each CT slice, a subset of 60 features is used for classification. ACO with tandem run strategy yielded 81.66% of accuracy whereas ACO without tandem run yielded an accuracy of 77.52%. When all the features are used for classifier training without feature selection algorithm, an accuracy of 75.14% is achieved. CONCLUSION: From the results, it is inferred that identifying relevant features to train the classifier has a definite impact on the classifier performance.

Support vector machine classification trees based on fuzzy entropy of classification.

The support vector machine (SVM) is a powerful classifier that has recently been implemented in a classification tree (SVMTreeG). This classifier partitioned the data by finding gaps in the data space. For large and complex datasets, there may be no gaps in the data space confounding this type of classifier. A novel algorithm was devised that uses fuzzy entropy to find optimal partitions for situations when clusters of data are overlapped in the data space. Also, a kernel version of the fuzzy entropy algorithm was devised. A fast support vector machine implementation is used that has no cost C or slack variables to optimize. Statistical comparisons using bootstrapped Latin partitions among the tree classifiers were made using a synthetic XOR data set and validated with ten prediction sets comprised of 50,000 objects and a data set of NMR spectra obtained from 12 tea sample extracts.

Detection of Conversion from Mild Cognitive Impairment to Alzheimer's Disease Using Longitudinal Brain MRI.

Mild Cognitive Impairment (MCI) is an intermediate stage between healthy and Alzheimer's disease (AD). To enable early intervention it is important to identify the MCI subjects that will convert to AD in an early stage. In this paper, we provide a new method to distinguish between MCI patients that either convert to Alzheimer's Disease (MCIc) or remain stable (MCIs), using only longitudinal T1-weighted MRI. Currently, most longitudinal studies focus on volumetric comparison of a few anatomical structures, thereby ignoring more detailed development inside and outside those structures. In this study we propose to exploit the anatomical development within the entire brain, as found by a non-rigid registration approach. Specifically, this anatomical development is represented by the Stationary Velocity Field (SVF) from registration between the baseline and follow-up images. To make the SVFs comparable among subjects, we use the parallel transport method to align them in a common space. The normalized SVF together with derived features are then used to distinguish between MCIc and MCIs subjects. This novel feature space is reduced using a Kernel Principal Component Analysis method, and a linear support vector machine is used as a classifier. Extensive comparative experiments are performed to inspect the influence of several aspects of our method on classification performance, specifically the feature choice, the smoothing parameter in the registration and the use of dimensionality reduction. The optimal result from a 10-fold cross-validation using 36 month follow-up data shows competitive results: accuracy 92%, sensitivity 95%, specificity 90%, and AUC 94%. Based on the same dataset, the proposed approach outperforms two alternative ones that either depends on the baseline image only, or uses longitudinal information from larger brain areas. Good results were also obtained when scans at 6, 12, or 24 months were used for training the classifier. Besides the classification power, the proposed method can quantitatively compare brain regions that have a significant difference in development between the MCIc and MCIs groups.

Identification of feature genes for smoking-related lung adenocarcinoma based on gene expression profile data.

This study aimed to identify the genes and pathways associated with smoking-related lung adenocarcinoma. Three lung adenocarcinoma associated datasets (GSE43458, GSE10072, and GSE50081), the subjects of which included smokers and nonsmokers, were downloaded to screen the differentially expressed feature genes between smokers and nonsmokers. Based on the identified feature genes, we constructed the protein-protein interaction (PPI) network and optimized feature genes using closeness centrality (CC) algorithm. Then, the support vector machine (SVM) classification model was constructed based on the feature genes with higher CC values. Finally, pathway enrichment analysis of the feature genes was performed. A total of 213 down-regulated and 83 up-regulated differentially expressed genes were identified. In the constructed PPI network, the top ten nodes with higher degrees and CC values included ANK3, EPHA4, FGFR2, etc. The SVM classifier was constructed with 27 feature genes, which could accurately identify smokers and nonsmokers. Pathways enrichment analysis for the 27 feature genes revealed that they were significantly enriched in five pathways, including proteoglycans in cancer (EGFR, SDC4, SDC2, etc.), and Ras signaling pathway (FGFR2, PLA2G1B, EGFR, etc.). The 27 feature genes, such as EPHA4, FGFR2, and EGFR for SVM classifier construction and cancer-related pathways of Ras signaling pathway and proteoglycans in cancer may play key roles in the progression and development of smoking-related lung adenocarcinoma.

Machine learning and dyslexia: Classification of individual structural neuro-imaging scans of students with and without dyslexia.

Meta-analytic studies suggest that dyslexia is characterized by subtle and spatially distributed variations in brain anatomy, although many variations failed to be significant after corrections of multiple comparisons. To circumvent issues of significance which are characteristic for conventional analysis techniques, and to provide predictive value, we applied a machine learning technique--support vector machine--to differentiate between subjects with and without dyslexia. In a sample of 22 students with dyslexia (20 women) and 27 students without dyslexia (25 women) (18-21 years), a classification performance of 80% (p < 0.001; d-prime = 1.67) was achieved on the basis of differences in gray matter (sensitivity 82%, specificity 78%). The voxels that were most reliable for classification were found in the left occipital fusiform gyrus (LOFG), in the right occipital fusiform gyrus (ROFG), and in the left inferior parietal lobule (LIPL). Additionally, we found that classification certainty (e.g. the percentage of times a subject was correctly classified) correlated with severity of dyslexia (r = 0.47). Furthermore, various significant correlations were found between the three anatomical regions and behavioural measures of spelling, phonology and whole-word-reading. No correlations were found with behavioural measures of short-term memory and visual/attentional confusion. These data indicate that the LOFG, ROFG and the LIPL are neuro-endophenotype and potentially biomarkers for types of dyslexia related to reading, spelling and phonology. In a second and independent sample of 876 young adults of a general population, the trained classifier of the first sample was tested, resulting in a classification performance of 59% (p = 0.07; d-prime = 0.65). This decline in classification performance resulted from a large percentage of false alarms. This study provided support for the use of machine learning in anatomical brain imaging.

Classification of atherosclerotic and non-atherosclerotic individuals using multiclass state vector machine.

BACKGROUND: Coronary artery disease due to atherosclerosis is an epidemic in India. An estimated 1.3 million Indians died from this in 2000. The projected death from coronary artery disease by 2016 is 2.98 million. OBJECTIVE: To build an effective model which assorts the individuals, whether they belong to the normal group, risk group and pathologic group regarding atherosclerosis in real time by doing necessary preprocessing techniques and to compare the performance with other state-of-the-art machine learning techniques. METHODS: In this work we have employed STULONG dataset. We have made a deep case study in selecting the attributes which contributes for higher accuracy in predicting the target. The selected attributes includes missing values. Initially our work includes imputation of missing values using Iterative Principal Component Analysis (IPCA). The second step includes selecting best features using Fast Correlation Based Filter (FCBF). Finally the classifier Multiclass Support Vector Machine (SVM) with kernel Radial Basis Function (RBF) is used for classification of atherosclerotic community. RESULTS: For the subjects belonging to the classes of normal, risk and pathologic, our methodology has outperformed with an accuracy of 99.85%, 99.80% and 99.46% respectively. CONCLUSION: The combined optimization methods such as Iterative Principal Component Analysis (IPCA) for missing value imputation, Multiclass SVM for classifying normal, risk and pathologic community in real time has performed with overall accuracy of about 98.97%. The essential pre-processing technique, Fast Correlation Based Filter (FCBF) was employed to further intensifying the target.

ACTIVE LEARNING GUIDED INTERACTIONS FOR CONSISTENT IMAGE SEGMENTATION WITH REDUCED USER INTERACTIONS.

Interactive techniques leverage the expert knowledge of users to produce accurate image segmentations. However, the segmentation accuracy varies with the users. Additionally, users may also require training with the algorithm and its exposed parameters to obtain the best segmentation with minimal effort. Our work combines active learning with interactive segmentation and (i) achieves as good accuracy compared to a fully user guided segmentation but with significantly lower number of user interactions (on average 50%), and (ii) achieves robust segmentation by reducing segmantation variability with user inputs. Our approach interacts with user to suggest gestures or seed point placements. We present extensive experimental evaluation of our results on two different publicly available datasets.