Geography-Dependent Horizontal Gene Transfer from Vertebrate Predators to Their Prey.

Horizontal transfer (HT) of genes between multicellular animals, once thought to be extremely rare, is being more commonly detected, but its global geographic trend and transfer mechanism have not been investigated. We discovered a unique HT pattern of Bovine-B (BovB) LINE retrotransposons in vertebrates, with a bizarre transfer direction from predators (snakes) to their prey (frogs). At least 54 instances of BovB HT were detected, which we estimate to have occurred across time between 85 and 1.3 Ma. Using comprehensive transcontinental sampling, our study demonstrates that BovB HT is highly prevalent in one geographical region, Madagascar, suggesting important regional differences in the occurrence of HTs. We discovered parasite vectors that may plausibly transmit BovB and found that the proportion of BovB-positive parasites is also high in Madagascar where BovB thus might be physically transported by parasites to diverse vertebrates, potentially including humans. Remarkably, in two frog lineages, BovB HT occurred after migration from a non-HT area (Africa) to the HT hotspot (Madagascar). These results provide a novel perspective on how the prevalence of parasites influences the occurrence of HT in a region, similar to pathogens and their vectors in some endemic diseases.

Co-Evolution of Predator-Prey Ecosystems by Reinforcement Learning Agents.

The problem of finding adequate population models in ecology is important for understanding essential aspects of their dynamic nature. Since analyzing and accurately predicting the intelligent adaptation of multiple species is difficult due to their complex interactions, the study of population dynamics still remains a challenging task in computational biology. In this paper, we use a modern deep reinforcement learning (RL) approach to explore a new avenue for understanding predator-prey ecosystems. Recently, reinforcement learning methods have achieved impressive results in areas, such as games and robotics. RL agents generally focus on building strategies for taking actions in an environment in order to maximize their expected returns. Here we frame the co-evolution of predators and preys in an ecosystem as allowing agents to learn and evolve toward better ones in a manner appropriate for multi-agent reinforcement learning. Recent significant advancements in reinforcement learning allow for new perspectives on these types of ecological issues. Our simulation results show that throughout the scenarios with RL agents, predators can achieve a reasonable level of sustainability, along with their preys.

A revised and dated phylogeny of cobweb spiders (Araneae, Araneoidea, Theridiidae): A predatory Cretaceous lineage diversifying in the era of the ants (Hymenoptera, Formicidae).

Cobweb spiders (Theridiidae) are highly diverse from the perspective of species richness, morphological diversity, variety of web architecture, and behavioral repertoires. The family includes over 50% of social spiders, a behavioral rarity among the order, and members of the family are furthermore the subject of research on venom, silk biomechanics, kleptoparasitism and web building, among other traits. Theridiidae is one of the most abundant groups of spiders, and thus key insect predators in many different ecosystems and is among relatively few spider families that show high degree of myrmecophagy. Modern comparative studies on all these fronts are best buttressed on a phylogenetic foundation. Our goal here is to offer a revised, dated, phylogenetic hypothesis for the family by summarizing previously published data from multiple molecular and morphological studies through data-mining, and adding novel data from several genera. We also test the hypothesis that the origin and diversification of cobweb spiders coincides with that of ants on which many species specialize as prey. The new phylogeny is largely congruent with prior studies and current taxonomy and should provide a useful tool for theridiid classification and for comparative analyses. Nevertheless, we also highlight the limitations of currently available data-the state of the art in Theridiidae phylogenetics-offering weak support for most of the deeper nodes in the phylogeny. Thus the need is clear for modern phylogenomic approaches to obtain a more solid understanding, especially of relationships among subfamilies. We recover the monophyly of currently recognized theridiid subfamilies with the exception of some enigmatic 'pholcommatines' (Styposis, Phoroncidia) and putative 'hadrotarsines' (Audifia, Tekellina) whose placement is uncertain in our analyses. Theridiidae dates back some 100 mya to the Cretaceous, a period of diversification in flowering plants and many groups of insects, including ants. The origin of cobweb spiders, and hence the cobweb-a speciallized trap for pedestrian prey-coincides with a major diversification shift in ants. The family becomes abundant in fossil record 50-40 mya as ants also diversify and reach dominance and contemporary patterns of abundances of theridiids and ants show the same trends, with increasing relative abundance towards the equator and at lower altitudes. We find that among orbiculariae, lineages that specialize on ant prey are non-randomly clustered within Theridiidae. Given these findings we hypothesize that the origin of the gumfoot web was a stepping stone that facilitated the capture of ants and resulted in specialized myrmecophagy in a number of 'basal' theridiids. We also document a subsequent loss in myrmecophagy, and associated increase in speciation rates, as 'recent' theridiid groups evolve diverse web forms and many return to the capture of aerial prey.

A Streptomyces globisporus strain kills Microcystis aeruginosa via cell-to-cell contact.

Cyanobacterial harmful algal blooms (CyanoHABs) bring economic loss, damage aquatic ecosystems, and produce cyanobacterial toxins that threaten human health. Algicidal bacteria as pathogens can expediate the decline of CyanoHABs. In this study, a Streptomyces globisporus strain (designated G9), isolated from soil near a eutrophic pond, showed high algicidal activity against Microcystis aeruginosa. Experimental results show that G9 preyed on Microcystis through cell-to-cell contact: (1) the hyphae of G9 killed cyanobacterial cells by twining around them, while cells beyond the reach of G9 hyphae were in normal shapes; (2) No algicides were detectable in the supernatant of G9 cultures or G9-Microcystis cocultures. The algicidal ratio of G9 to M. aeruginosa reached 96.7% after 6 days. G9 selectively killed the tested cyanobacterial strains, while it had only minor impacts on the growth of tested Chlorophyceae. Differential gene expression studies show that G9 affected the expression of key genes of M. aeruginosa involved in photosynthesis, microcystin synthesis and cellular emergency responses. Further, the microcystin-LR content decreased gradually with G9 treatment. As the first reported Streptomyces sp. with algicidal (predation) activity requiring cell-to-cell contact with target prey, G9 is a good candidate for the exploration of additional cyanobacteria-bacteria interactions and the development of novel strategies to control CyanoHABs.

Global warming overrides physiological anti-predatory mechanisms in intertidal rock pool fish Gobius paganellus.

In nature, a multitude of factors influences the fitness of an organism at a given time, which makes single stressor assessments far from ecologically relevant scenarios. This study focused on the effects of water temperature and predation stress on the metabolism and body mass gain of a common intertidal rock pool fish, Gobius paganellus, addressing the following hypotheses: (1) the energy metabolism of G. paganellus under predation stress is reduced; (2) G. paganellus shows thermal compensation under heat stress; and (3) thermal stress is the dominant stressor that may override predation stress responses. Individuals were exposed to simulated predation stress and temperature increase from 20 °C to 29 °C, and both stressors combined. Physiological effects were addressed using biochemical biomarkers related with energy metabolism (isocitrate dehydrogenase, lactate dehydrogenase, energy available, energy consumption rates), oxidative stress (superoxide dismutase, catalase, DNA damage, lipid peroxidation), and biotransformation (glutathione-S-transferase). The results of this study revealed that predation stress reduced the cellular metabolism of G. paganellus, and enhanced storage of protein reserves. As hypothesized, hyperthermia decreased the aerobic mitochondrial metabolism, indicating thermal compensation mechanisms to resist against unfavourable temperatures. Hyperthermia was the dominant stressor overriding the physiological responses to predation stress. Both stressors combined might further have synergistically activated detoxification pathways, even though not strong enough to counteract lipid peroxidation and DNA damage completely. The synergistic effect of combined thermal and predation stress thus may not only increase the risk of being preyed upon, but also may indicate extra energy trade-off for the basal metabolism, which in turn may have ecologically relevant consequences for general body functions such as somatic growth and reproduction. The present findings clearly underline the ecological importance of multi-stressor assessments to provide a better and holistic picture of physiological responses towards more realistic evaluations of climate change consequences for intertidal populations.

Vision Guides Selection of Freeze or Flight Defense Strategies in Mice.

In prey species such as mice, avoidance of predators is key to survival and drives instinctual behaviors like freeze or flight [1, 2]. Sensory signals guide the selection of appropriate behavior [3], and for aerial predators only vision provides useful information. Surprisingly, there is no evidence that vision can guide the selection of escape strategies. Fleeing behavior can be readily triggered by a rapidly looming overhead stimulus [4]. Freezing behavior, however, has previously been induced by real predators or their odors [5]. Here, we discover that a small moving disk, simulating the sweep of a predator cruising overhead, is sufficient to induce freezing response in mice. Looming and sweeping therefore provide visual triggers for opposing flight and freeze behaviors and provide evidence that mice innately make behavioral choices based on vision alone. VIDEO ABSTRACT.

Predation of Piaractus mesopotamicus and Oreochromis niloticus larvae by Pantala flavescens with different length classes - doi: 10.4025/actascibiolsci.v33i4.5470 / Predation of Piaractus mesopotamicus and Oreochromis niloticus larvae by Pantala flavescens with different length classes - doi: 10.4025/actascibiolsci.v33i4.5470

The experiment had as objective to study the survival of Piaractus mesopotamicus and Oreochromis niloticus larvae subject to predation by Pantala flavescens larvae with different length classes. We used 120 larvae of P. mesopotamicus, 120 of O. niloticus, and also 24 larvae of Pantala flavescens, distributed in 24 aquariums with useful volume for 2 L, being placed one Odonate for aquarium. The treatments differed as regard to the prey species and the predator size, being kept a control treatment. An aquarium (2 L) containing one larvae of Odonate and 10 larvae of fish were considered an experimental unit. After the beginning, each three hours (18:00, 21:00, 0:00, 3:00, 6:00, 9:00, 12:00, 15:00 and 18:00h), the remnant larvae of fish (alive) in each experimental unit was quantified, and we replaced the consumed larvae, so that we always had 10 larvae of fish at each aquarium after each counting. For both fish species, there was a slight increase in consumption by the Odonate with intermediate size, but the values did not differ statistically (p > 0.05). Larvae of Odonate in the treatments with greater length presented a lower consumption (p 0.05) than in other treatments.

The experiment had as objective to study the survival of Piaractus mesopotamicus and Oreochromis niloticus larvae subject to predation by Pantala flavescens larvae with different length classes. We used 120 larvae of P. mesopotamicus, 120 of O. niloticus, and also 24 larvae of Pantala flavescens, distributed in 24 aquariums with useful volume for 2 L, being placed one Odonate for aquarium. The treatments differed as regard to the prey species and the predator size, being kept a control treatment. An aquarium (2 L) containing one larvae of Odonate and 10 larvae of fish were considered an experimental unit. After the beginning, each three hours (18:00, 21:00, 0:00, 3:00, 6:00, 9:00, 12:00, 15:00 and 18:00h), the remnant larvae of fish (alive) in each experimental unit was quantified, and we replaced the consumed larvae, so that we always had 10 larvae of fish at each aquarium after each counting. For both fish species, there was a slight increase in consumption by the Odonate with intermediate size, but the values did not differ statistically (p > 0.05). Larvae of Odonate in the treatments with greater length presented a lower consumption (p 0.05) than in other treatments.

Predation of Piaractus mesopotamicus and Oreochromis niloticus larvae by Pantala flavescens with different length classes / Predação de P. mesopotamicus e O. niloticus por larvas de Pantala flavescens de diferentes classes de coprimento

The experiment had as objective to study the survival of Piaractus mesopotamicus and Oreochromis niloticus larvae subject to predation by Pantala flavescens larvae with different length classes. We used 120 larvae of P. mesopotamicus, 120 of O. niloticus, and also 24 larvae of Pantala flavescens, distributed in 24 aquariums with useful volume for 2 L, being placed one Odonate for aquarium. The treatments differed as regard to the prey species and the predator size, being kept a control treatment. An aquarium (2 L) containing one larvae of Odonate and 10 larvae of fish were considered an experimental unit. After the beginning, each three hours (18:00, 21:00, 0:00, 3:00, 6:00, 9:00, 12:00, 15:00 and 18:00h), the remnant larvae of fish (alive) in each experimental unit was quantified, and we replaced the consumed larvae, so that we always had 10 larvae of fish at each aquarium after each counting. For both fish species, there was a slight increase in consumption by the Odonate with intermediate size, but the values did not differ statistically (p > 0.05). Larvae of Odonate in the treatments with greater length presented a lower consumption (p < 0.05) than in other treatments.

O experimento teve como objetivo avaliar a sobrevivência de larvas de P. mesopotamicus e O. niloticus submetidas à predação por larvas de Pantala flavescens de diferentes classes de comprimento. Foram utilizadas 120 larvas de cada espécie de peixe e 24 larvas de Odonata, distribuídas em 24 aquários (2 L), sendo colocada uma Odonata por aquário. Os tratamentos diferiram quanto à espécie de presa e o tamanho do predador, sendo mantido um tratamento-controle. Um aquário (2 L) com uma Odonata e dez larvas de peixe foi considerada uma unidade experimental. As Odonatas foram colocadas nos aquários 1h antes das larvas de peixe. Foram efetuadas contagens a cada 3h (18, 21, 0, 3, 6, 9, 12, 15 e 18h) das larvas de peixe remanescentes (vivas) em cada unidade experimental, sendo repostas as larvas consumidas, de modo a ter dez larvas de peixe em cada aquário logo após cada contagem. Para ambas as espécies de peixe, foi observado leve aumento no consumo das larvas pelas Odonatas de tamanho intermediário, porém os valores não diferiram estatisticamente (p > 0,05). As larvas de Odonata nos tratamentos em que apresentavam maior comprimento tiveram consumo menor (p < 0,05) que nos demais.